Xiphophorus hellerii (green swordtail): 116724483
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Entry
116724483 CDS
T07363
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
xhe04054
]
116724483
Pattern recognition receptors [BR:
xhe04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
116724483
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
NOD2_WH
PRY
LRR_6
SPRY
LRR_4
LRR_1
AFG1_ATPase
LRR_8
Motif
Other DBs
NCBI-GeneID:
116724483
NCBI-ProteinID:
XP_032426108
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Position
8:complement(7025160..7046552)
Genome browser
AA seq
978 aa
AA seq
DB search
MALEDNIVTFVKKELKKIQKVLSPNDPEHSESQRDDDEVLEGDDEEQRRSSREAVMKITL
NFLRRMKQEELADRLQSRHFAPVCQHQLKSGLKKKFQSVFEGIAKAGSPTLLNQIYTELY
ITEGGTGEVNDEHEVRQIETASRKPHRPETTVRGEDIFKVQPGRDQPIRTVMTKGVAGIG
KTVLTQKFTLDWAEDKAHQNIQFIFPFTFRELNVLKEKKFSLVELVHHFFSETKEICSFE
HFQVLFIFDGLDESRLDLDFHNKEILTDATESTSVDVLLTNLIRGKLLPSALLWITTRPA
AANQIPPECVDMVTEVRGFNDPQKEEYFRKRFRGKKQASRIISHMKTSRSLHIMCHIPVF
CWITATVLEDVLETREGGELPSTLTEMYIHFLVVQTKVKKVKYDGGAATDPHWSPESRKM
IESLGKLAFDQLQKGNLIFYESDLTECGIDIRAASVYSGVFTQIFKEERGLYQDKVFCFV
HLSVQEFLAALHVHLTFINSGSDVMKETQISKKSSLLNKSDLKSLHQRAVDQALQSPNGH
LDLFLRFLLGLSLQTNQRLLQGLLTKTGSSSQTNQETVQYIKEKINENVSAEKSINLFHC
LNELNDRSLVEEIQQSLSSGRLSTAKLSPAQWSALGFILVSSGKDLDVFDLKKYSASEEV
LLRLLPVVKASNKALLSYCNLSERSCEALSSVLSSQSSSLRELDLSNNKLQDSGVKLLSA
GLKSPNCNLETLRLSDCNLSERSCEALSSVLSSQSSSLRELDLSNNNLQDSGVKLLSAGL
KSPNCNLETLRVEPAGVPFLTPGPWRLKRYSCQLTIDTNTVSRELKLSEDNRKVTRVEEL
QSYPDHPDRFDDPQLLCRTGLTGRCYWEVEWRGDVDISVSYRRIMRKEDSGDCLFGLNDH
SWSLRCSDDHGYCVRHNYRQTRLSSSSVSNRVAVYVDCPAGILSFYRVSSDSLILLHTFN
ITFTEPLIPGFGFWFSSG
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggaggacaatattgtcacttttgtgaagaaagaactgaagaagattcagaaa
gttctgagtccaaatgacccagaacattcagagagtcagagagatgatgatgaggtgttg
gaaggtgatgatgaagagcagaggaggagcagcagagaggcagtgatgaagatcacactg
aacttcctgaggaggatgaagcaggaggagctggctgaccgtctgcagagcagacatttt
gctccagtttgtcaacatcaacttaaatctggtctgaagaagaagttccagtctgtgttt
gaggggattgctaaagcaggaagtccaacccttctgaaccagatctacacagagctctac
atcacagagggagggactggagaggtcaatgatgaacatgaggtcagacagattgaaaca
gcatccaggaaaccacacagaccagaaacaacagtcagaggagaagacatctttaaagtc
caacctggaagagatcaaccaatcagaacagtgatgacaaagggagtggctggcattggg
aaaacagtcctaacacaaaagttcactctggactgggctgaagacaaagcccaccagaac
atccagttcatatttccattcacgttcagagagctgaatgtgctgaaagagaaaaagttc
agcttggtggaacttgttcatcacttctttagtgaaaccaaagaaatctgcagctttgaa
cacttccaggttctgttcatctttgatggcctggatgagagtcgacttgatctggacttc
cacaacaaggagatcctgactgatgctacagagtccacctcagtggacgttctgctgaca
aacctcatcagggggaaactgcttccctctgctctcctctggataaccacacgacctgca
gcagccaatcagatccctcctgagtgtgttgacatggtaacagaggtcagagggttcaat
gacccacagaaggaggagtacttcaggaagagattcagaggtaagaaacaggccagcagg
atcatctcccacatgaagacatcacgaagcctccacatcatgtgccacatcccagtcttc
tgctggatcactgctacagttctggaggatgtgttggagaccagagagggaggagagctg
cccagcaccctgactgagatgtacatccacttcctggtggttcagaccaaagtgaagaag
gtcaagtatgatggaggagctgcaacagatccacactggagtccagagagcaggaagatg
attgagtctctgggaaaactggcttttgatcagctgcagaaaggaaacctgatcttctat
gaatcagacctgacagagtgtggcatcgatatcagagcagcctcagtgtactcaggagtg
ttcacacagatctttaaagaggagagaggtctgtaccaggacaaggtgttctgcttcgtc
catctgagtgttcaggagtttctggctgctcttcatgttcatctgacctttatcaactct
ggttctgacgtgatgaaagaaacacaaatatctaagaaatcttcattacttaataaatct
gacctaaaatctctccaccagagagctgttgaccaggccttacagagtccaaatggacac
ctggacttgttcctccgcttcctcctgggactttcactgcagaccaatcagagactccta
caaggtctgctgacaaagacaggaagtagctcacagaccaatcaggaaacagttcagtac
atcaaggagaagatcaatgaaaatgtatctgcagagaaaagcatcaatctgttccactgt
ctgaatgaactgaatgatcgttctctagtggaggagatccaacagtctctgagttcagga
cgtctctccacagctaaactgtctcctgctcagtggtcagctcttggtttcatcttagtg
tcatcaggaaaagatctggatgtgtttgacctgaagaaatactctgcttcagaggaggtt
cttctcaggctgctgccagtggttaaagcctccaacaaagctctactgagttactgtaac
ctctcagagagaagctgtgaagctctgtcctcagttctcagctcccagtcctccagtctc
agagaactggacctgagtaacaacaagctgcaggattcaggagtgaagcttctctctgct
ggactgaagagtccaaactgcaacctggaaactctcagactgagtgactgtaacctctca
gagagaagctgtgaagctctgtcctcagttctcagctcccagtcctccagtctcagagaa
ctggacctgagtaacaacaacctgcaggattcaggagtgaagcttctctctgctggactg
aagagtccaaactgcaacctggaaactctcagggtggagcctgctggagtcccattcttg
acaccaggtccatggagactgaaaagatattcctgtcaactcaccatcgacacaaacaca
gtgagcagagaactcaaactgtctgaagacaacaggaaggtgacacgtgtggaggagctt
cagtcatatcctgatcatccagacagatttgatgatccgcagctgctgtgtagaactggt
ctgactggtcgctgttactgggaggtcgagtggagaggagatgttgatatatcagtgagt
tacagaagaatcatgaggaaagaagacagtggagactgtttgtttggattgaatgatcat
tcctggagtctgagatgttctgatgatcatggttactgtgtcaggcacaattacagacaa
actcgtctctcctcctcctctgtctctaacagagtagcagtgtatgtggactgtcctgct
ggcattctgtccttctacagagtttcctctgactcactgatcctcctccacaccttcaac
atcacattcactgaacctctgattcctggatttgggttctggttcagttctggt
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