Xiphophorus hellerii (green swordtail): 116724486
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Entry
116724486 CDS
T07363
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
xhe04054
]
116724486
Pattern recognition receptors [BR:
xhe04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
116724486
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FISNA
NLRC4_HD2
NACHT
LRR_6
NOD2_WH
PRY
SPRY
LRR_1
LRR_4
AFG1_ATPase
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
116724486
NCBI-ProteinID:
XP_032426111
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Position
8:complement(4020886..4046297)
Genome browser
AA seq
1084 aa
AA seq
DB search
MDDPVVGFKSPGPPSSERVDQQSSEVPSGPSTQQHQTQLDSVFMLLEDNIVTFVKNELKK
IQKVLSPDDTECSESQNDDDEVLEGEDEEQRRSNREAVMKITLNFLRRMKQEELADRLQS
KQFAAVFRHDHKSVLKKKFQSVFEGIAKAGSPTLLNQIYTELYITEGGTGEVNDEHEIRQ
IETASRKPHRPETTIRQEDIFKVPPGRDQPIRTVMTKGVAGIGKTVLTQKFTLDWAEDKT
HQNIQFIFPFTFRELNVLKEKKFSLVELVHHFFNKTKRICSFEHFQVLFIFDGLDESRLP
LDFHNKEILTDATESTSVDVLLTNLIRGKLLPSALLWITTRPAAANQIPPQCVDMVTEVR
GFNDPQKEEYFRKRFRDKKQASRIISHMKTSRSLHIMCHIPVFCWITATVLEDVLQTREG
GELPRTLTEMYIHFLVVQTKVKKVKYDRGGETDPHWSPESRKMIESLGKLAFDQLQKGNL
IFYESDLTECGIDIKAASVYSGVFTQIFKEERGLYQDKVFCFIHLSVQEFLAALHVHRTF
INSGVNLMEETQTPMLWSLFSKPKLNSLHQRAVDQALQSPNGHLDLFLRFLLGLSLQTNQ
RLLKGLLTQTGSSSQTNQETVQFIKKKISEKVSAEKSINLFHCLNELNDRSLVEEIQQSL
SSGSLSTDKLSPAQWSALGFILVSSGKDLDVFDLKKYSASEEVLLRLLPVVKASNKALLS
GCNLSERSCEALSSVLSSQSSSLRELDLRKNNLQDSGVKLLSAGLKSPNCNLETLRLSGC
NLSERSCEALSSVLSSQSSSLRELDLSNNNLQDSGVKLLSAGLKSPNCNLETLSLSGCLV
SEEGCASLASALTSNPSHLKELDLSYNHPGDSGVKLLSAGLKDPHWRLEALRVEPAGVPF
LTPGLRKYSCQLTIDTNTVNRKLKLSEDNRKVTRVEELQSYPDHPDRFDSWNQLLCRTGL
TGRCYWEVEWRGKVDISVSYRRIRRKGNTRDCVFGYNDHSWSLRCSDDDGYSVWHNKIET
RLSSSSDSHRVAVYVDCPAGILSFYRVSSDSLILLHTFNTTFTEPLIPGFSVWWSNYGSS
VFLC
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atggatgatcctgttgttggctttaaatctcctggacctccatcatcagagagagtggac
cagcagagctcagaggttcccagtggtccatctacccagcagcatcaaacacagctggac
tccgtatttatgcttctggaggacaacattgtcacttttgtgaaaaatgagctgaagaag
attcagaaggttctgagtcctgatgacacagaatgttcagagagtcagaatgatgatgat
gaggtgttggaaggtgaggatgaagagcagaggaggagcaacagagaggcagtgatgaag
atcacactgaacttcctgaggaggatgaagcaggaggagctggctgaccgtctgcagagc
aaacaatttgctgcagtttttcgacatgatcataaatctgttctgaagaagaagttccag
tctgtgtttgaggggattgctaaagcaggaagtccaacccttctgaaccagatctacaca
gagctctacatcacagagggagggactggagaggtcaatgatgaacatgagatcagacag
attgaaacagcatccaggaaaccacacagaccagaaacaacaatcagacaagaagacatc
tttaaagtcccacctggaagagatcaaccaatcagaacagtgatgacaaagggagtggct
ggcattgggaaaacagtcctaacacaaaagttcactctggactgggctgaagacaaaacc
caccagaacatccagttcatatttccattcacgttcagagagctgaatgtgctgaaagag
aaaaagttcagcttggtggaacttgttcatcacttctttaataaaaccaaaagaatctgc
agctttgaacacttccaggttctgttcatctttgatggcctggatgagagtcgacttcct
ctggacttccacaacaaggagatcctgactgatgctacagagtccacctcagtggatgtt
ctgctgacaaacctcatcagggggaaactgcttccttctgctctcctctggataaccaca
cgacctgcagcagccaatcagatccctcctcagtgtgttgacatggtgacagaggtcaga
gggttcaatgacccacagaaggaggagtacttcaggaagagattcagagataagaaacag
gccagcaggatcatctcccacatgaagacatcacgaagcctccacatcatgtgccacatc
ccagtcttctgctggatcactgctacagttctggaggatgtgttgcagaccagagaggga
ggagagctgcccagaaccctgactgagatgtacatccacttcctggttgttcagaccaaa
gtgaagaaggtcaagtatgatagaggaggtgaaacagatccacactggagcccagagagc
aggaagatgattgagtctctgggaaaactggcttttgatcagctgcagaaaggaaacctg
atcttctatgaatcagacctgacagagtgtggcatcgatatcaaagcagcctcagtgtac
tcaggagtgttcacacagatctttaaagaggagagaggtctgtaccaggacaaggtgttc
tgcttcatccatctgagtgttcaggagtttctggctgctcttcatgttcatcggaccttc
atcaactctggtgtcaacctgatggaagaaacacaaacacctatgctgtggtcattattt
agcaaacctaaactaaattctctccatcagagagctgttgaccaggccttacagagtcca
aatggacacctggacttgttcctccgcttcctccttggactttcactgcagaccaatcag
agactcctaaaaggcctgctgacacagacaggaagtagctcacagaccaatcaggaaaca
gttcagtttatcaagaaaaaaatcagtgagaaagtgtctgcagagaaaagcatcaatctg
ttccactgtctgaatgaactgaatgatcgttctctagtggaggagatccaacagtctctg
agttcaggaagtctctccacagataaactgtctcctgctcagtggtcagctctgggtttc
atcttagtgtcatcaggaaaagatctggatgtgtttgacctgaagaaatactctgcttca
gaggaggttcttctgaggctgctgccagtggttaaagcctccaacaaagctctactgagt
ggctgtaacctctcagagagaagctgtgaagctctgtcctcagttctcagctcccagtcc
tccagtctcagagaactggacctgagaaaaaacaacctgcaggattcaggagtgaagctt
ctctctgctggactgaagagtccaaactgcaacctggaaactctcagactgagtggctgt
aacctctcagagagaagctgtgaagctctgtcctcagttctcagctcccagtcctccagt
ctcagagaactggacctgagtaacaacaacctgcaggattcaggagtgaagcttctctct
gctggactgaagagtccaaactgcaacctggaaactctcagcttatcaggctgtttggtc
tcagaggaaggctgtgcttctctggcctcagctctgacctccaacccctcccatctgaaa
gagttggacctgagctacaatcatccaggagactcaggagtgaagctgctgtcggctgga
ctgaaggatccacactggagactggaagctctcagggtggagcctgctggagtcccattc
ttgacaccaggtctgaggaagtattcctgtcaactcaccatcgacacaaacacagtgaac
agaaaactcaaactgtctgaagacaacaggaaggtgacacgtgtggaggagcttcagtca
tatcctgatcatccagacagatttgatagctggaatcagctgctgtgtagaactggtctg
actggtcgctgttactgggaggttgagtggagaggaaaagttgatatatcagtgagttac
agaagaatcaggaggaaaggaaacactagagactgtgtgtttggatataatgatcattcc
tggagtctgagatgctctgatgatgatggttactctgtctggcacaataagatagaaact
cgtctctcctcctcctctgactctcacagagtagcagtgtatgtggactgtcctgctggc
attctgtccttctacagagtttcctctgactcactgatcctcctccacaccttcaacacc
acattcactgaacctctgattcctggattttcggtctggtggtccaattatggttcctca
gtgtttctgtgctga
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