Xiphophorus hellerii (green swordtail): 116724487
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Entry
116724487 CDS
T07363
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
xhe04054
]
116724487
Pattern recognition receptors [BR:
xhe04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
116724487
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
NACHT
FISNA
NOD2_WH
PRY
LRR_6
SPRY
LRR_1
LRR_4
AFG1_ATPase
Motif
Other DBs
NCBI-GeneID:
116724487
NCBI-ProteinID:
XP_032426112
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Position
8:complement(2623084..3261452)
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AA seq
1060 aa
AA seq
DB search
MGEFIYFKSPGSPPSERIHQRLKPEPEHSCVSFRSNRSKPDPIDFKSGAPPSWRVDQQNS
EGHRGLSTQQHQTQLDSIFMMLEDNIVTFLKNELKKIHTILSPDYPECSESKREDDEVLE
GEDEAQRSSREAVMKITLNFLRRMKQEELADHLKSKCLAAVCQHQLKSGLKKKFQSVFEG
IAKAGSPTLLNQIYTELYIIEGGTGGVNDEHEVRQIETASRKIHRPETTIRQEDFFKVPP
GRDHPIRTVMTKGVAGIGKTVLTQKFTLDWAEDKAHQNIHFIFPFTFRELNVLREKMFSL
VELVHHFFPETKEICSFEHFQVLFIFDGLDESRLPLDFHNKEILTDATESTSVDVLLINL
IRGKLLPSAHLWITTRPAAANQMPPQCVGMVTEVRGFNDPQKEEYFRKRFRDKEQASRII
SHMKTSQSLHIMCHIPVFCWITASVMEDVLETREGGDLPRTLTEMYIHFLVVQTKVKKVK
YDGGAETDPHWSPESRKMIESLGKLAFDQLQKGNMIFYRSDLTECGIDIRAASVYSGVFT
QIFKEERGLYQDKVFCFVQLSVQEFLAALHVHLAFINSGVNLMEEAQTSENLSLLRDSKQ
KFLHQRAVNQALQSPNGHLDLFLRFLVGLSLQTNQRLLQGLLTQTGSRSQTNQETVKYIK
KKISENVSAEKSINLFHCLNELNDRSLVEEIQQSLSSGSLCTDKLSPAQWSALGFILLSS
GKNLYVFDLKKYSASEEVLLRLLPVVKASNKALLSVCNLSERSCEALSSVLSSQSSSLRE
LDLSNNNLQDSGVKLLSAGLKSPNCNLETLRLSGCLVSEEGCASLASALTSNPSHLKELD
LSYNHPGDSGVKLLSAGLKDPHWRLEALRVEPAGVPFLTPGLRKYSCQLTIDTNTVSRFL
KLSEDNRKVTCEEELQSYPDHPDRFDYYHQLLCRTGLTGRCYWEVEWRGRVNISVSYRRI
RRKGSSRDCMFGYNDHSWSLICSDSYGYSVRHNKIETRLSSSSVSNRVAVYVDCPAGILS
FYRVSSDSLILLHTFNTTFTEPLIPGFGFWLRSDSSVFLC
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaattcatttactttaaatctcctggatctccaccatcagagaggatacatcag
agactcaaaccagaaccagaacacagctgtgtgtccttcaggagcaacaggtcaaagcct
gatcccattgactttaaatctggagctccaccatcatggagagtggaccagcagaactca
gagggtcatagaggtctgtctacccagcagcatcaaacacagctggactccatatttatg
atgctggaggacaacattgtcacttttttgaagaacgagctgaagaagatccatacgatt
ctgagtccagattacccagaatgctcagagagtaagagagaggatgatgaggtgttggaa
ggtgaggatgaagcacagaggagcagcagagaggcagtgatgaagatcacactgaacttc
ctgaggaggatgaagcaggaggagctggctgaccatctgaaaagcaaatgtcttgctgca
gtttgtcaacatcaacttaaatctggtctgaagaagaagttccagtctgtgtttgagggg
attgctaaagcaggaagtccgacccttctgaaccagatctacacagagctctacatcata
gagggaggtactggaggggtcaatgatgaacatgaggtcagacagattgaaacagcatcc
aggaaaatacacagaccagaaacaacaatcagacaagaagacttctttaaagtcccacct
ggaagagatcatccaatcagaacagtgatgacaaagggagtggctggcattgggaaaaca
gtcctaacacagaagttcactctggactgggctgaagacaaagcccaccagaacatccac
tttatatttccattcactttcagagagttgaatgtgctgagagaaaaaatgttcagcttg
gtggaacttgttcatcacttctttcctgaaaccaaagaaatctgcagctttgaacacttc
caggttctcttcatatttgatggtctggatgagagtcgacttcctctggacttccacaac
aaggagatcctgactgatgctacagagtccacctcagtagatgttctgctgataaacctc
attaggggaaaactgcttccttctgctcacctctggataaccacacgacctgcagcagcc
aatcagatgcctcctcagtgtgttggcatggtgacagaggttagagggttcaatgaccca
cagaaggaggagtacttcaggaagagattcagagataaggagcaggccagcagaatcatc
tcccacatgaagacatcacaaagcctccatataatgtgccacatcccagtcttctgctgg
atcactgcttcagttatggaggatgtgttggagaccagagagggaggagatctgcccaga
accctgaccgagatgtacatccacttcctggtggttcagaccaaagtgaagaaggtcaag
tatgatggaggagctgaaacagatccacactggagtccagaaagcaggaagatgattgag
tctctgggaaaactggctttcgatcagctgcagaaaggaaacatgatcttctatagatca
gacctgacagagtgtggcattgatatcagagcagcgtcagtgtactcaggagtgttcaca
cagatctttaaagaggagagagggctgtaccaggacaaggtgttctgctttgtccagctg
agtgttcaggagtttttggctgctcttcatgttcatctggccttcatcaactctggagtc
aacctgatggaagaagcacaaacatctgagaacctttcattacttagagactctaaacaa
aaatttctccatcagagagctgttaatcaggccttacagagtcctaatggacacctggac
ttgttcctccgcttcctcgtgggactttcactgcagaccaatcagagactcctacaaggt
ctgttgacacagacaggaagtagatcacagaccaatcaggaaacagttaaatacatcaag
aaaaaaatcagtgagaatgtgtctgcagagaaaagcatcaatctgttccactgtctgaat
gaactgaatgatcgttctctagtggaggagatccaacagtctctgagttcaggaagtctc
tgcacagataaactgtctcctgctcagtggtcagctctgggtttcatcttactgtcatca
ggaaaaaatctgtatgtgtttgacctgaagaaatactctgcttcagaggaggttcttctg
aggctgctgccagtggttaaagcctccaacaaagctctactgagtgtctgtaacctctca
gagagaagctgtgaagctctgtcctcagttctcagctcccagtcctccagtctcagagaa
ctggacctgagtaacaacaacctgcaggattcaggagtgaagcttctctctgctggactg
aagagtccaaactgcaacctggaaactctcagattatcaggctgtttggtctcagaggaa
ggctgtgcttctctggcctcagctctgacctccaacccctcccatctgaaagagttggac
ctgagctacaatcatccaggagactcaggagtgaagctgctgtcggctggactgaaggat
ccacactggagactggaagctctcagggtggagcctgctggagtcccattcttgacacca
ggtctgaggaagtattcctgtcaactcaccatcgacacaaacacagtgagcagattcctc
aaactgtctgaagacaacaggaaggtgacatgtgaggaggagcttcagtcatatcctgat
catccagacagatttgattactatcatcagctgctgtgtagaactggtctgactggtcgc
tgttactgggaggttgagtggagagggagagttaatatttcagtgagttacagaagaatc
aggaggaaaggaagcagtagagactgtatgtttggatataatgatcattcctggagtctg
atctgctctgatagttatggttactctgtcaggcacaataagatagaaactcgtctctcc
tcctcctctgtctctaacagagtagcagtgtatgtggactgtcctgctggcattctgtcc
ttctacagagtttcctctgactcactgatcctcctccacaccttcaacaccacattcact
gaacctctgattcctggatttgggttctggctcagatctgattcctcagtgtttttgtgc
tga
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