Xiphophorus hellerii (green swordtail): 116724488
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Entry
116724488 CDS
T07363
Symbol
tmc2
Name
(RefSeq) transmembrane channel-like protein 2
KO
K21988
transmembrane channel-like protein
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xhe02000
]
116724488 (tmc2)
03037 Cilium and associated proteins [BR:
xhe03037
]
116724488 (tmc2)
Transporters [BR:
xhe02000
]
Other transporters
Pores ion channels [TC:
1
]
116724488 (tmc2)
Cilium and associated proteins [BR:
xhe03037
]
Other cilia and associated proteins
Stereociliary proteins
116724488 (tmc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Arc_capsid_dom
Phage_Gp23
Motif
Other DBs
NCBI-GeneID:
116724488
NCBI-ProteinID:
XP_032426113
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Position
8:complement(4184607..4195806)
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AA seq
884 aa
AA seq
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MPRRSAAAEDVGIEIDEDETDSDDGSNRRKANRRPAGGRGGGGRGRGRGRGKKADSDDEE
DDEDEAPKGRGRGGNRRKPGNKRGGGKNDDDDDSEDDSPKKKRGGAANRKKGGKAQDSDE
DDSDDGKGKRGKKGGKKGGKEEEKGKKGDAKGKDKGKDKDDDKKKKKKKGDSSSDSNSNS
DEEEESMSEGEMARLMEEVEEKKKLIATIRNKPWRMKRRLVLLKEAQQFVDKFEGALGKG
KGRKWYAYKVMMTKKWIKFQRDFENFRTACIPWERKIKEVESHFGSSVASYFIFLRWMYG
MNLVLFGLTFGLVVIPEVLMGLPYGSIPRKTVPRAEQDTAQDYSVLMDFNGYCKYSVLFY
GYYDDKRTIGPLKFRLPLSYLLVGIGSFGYSLMLVIRTMAKNADVGGGDGEEGEFTFAWK
MFTSWDYLIGNAETADNKYASITTSFKESIVDEQENQKDENIHLRRFLRVLANFLITCSL
GGSGYLIYFVVKRSQEFASRDDLSWYEKNELEIIMSLLGLVCPPLFETIAELEDYHPRIA
LKWQLGRIFALFLGNLYTFLFALFDEVNSKLDEEQSIKNASIWAMKEYYANYSRLLNDSD
ATPPPMSPADVIRGPCWETAVGIEFVKLTVSDIQVTYLTILIGDFARAVIVRFLNYCWCW
DLEAGFPSYGEFDISGNVLGLVFNQGMIWMGAFYAPGLVGINVLRLLSSMYYQCWAVMAT
NVPHERVFKASKSNNFYMGLLLLILFLSLLPVVYTIMTLPPSFDCGPFSGRAKMFDVIME
TIRLDLPAFMGTLFSYAANPGLIIPAVLLMVLAIYYLNSVSEAYQNSNMELKKKMQMARD
EEKNRRNNKDSTNQVMKDLEDLLPNRSLSPPPEPGQSHQNHRHG
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgccgagaagaagcgcagcggcggaggacgtcggaatcgagattgatgaagatgagacc
gacagcgatgacggcagcaaccggaggaaagccaacaggaggccggcaggtgggcgagga
ggaggaggaagaggaagaggaagaggaagaggtaagaaggccgacagcgacgacgaggaa
gacgatgaagatgaggctccaaagggacgaggaagaggaggaaacaggaggaagcccggc
aataaacgaggcggcggtaagaacgacgatgatgatgacagcgaagatgattctcccaag
aagaagagaggaggagcagcaaaccggaagaaaggcggcaaagcccaagacagtgatgaa
gacgacagcgacgacgggaaaggaaagagaggaaagaaaggagggaagaaaggagggaag
gaggaggagaagggaaagaaaggcgacgccaaaggaaaagacaaagggaaagacaaagat
gacgacaagaagaagaagaagaagaagggtgacagttcgtcggactccaactcgaactca
gacgaggaggaggagtccatgtcggagggggagatggcgcggctaatggaggaggtggag
gagaagaagaaactgatcgccaccatcaggaacaagccttggcggatgaagcggcggctc
gttctcttaaaggaagctcaacaatttgtggataagtttgaaggtgctctgggaaaagga
aaaggcaggaagtggtatgcctacaaagtgatgatgacgaagaaatggattaagtttcag
agagattttgaaaatttcagaacagcctgcatcccctgggagaggaagattaaagaggtg
gaaagtcacttcggatcatcagtcgcttcttacttcatcttcctgcgatggatgtacggc
atgaatctcgtcctatttggtctcacctttggactcgtcgtcattcctgaggtcctcatg
ggtcttccttacgggtccattcccagaaagacggtaccgagagcagagcaggacactgct
caggattattcagttctcatggacttcaacggatactgtaaatactcagtcctgttctat
ggatattacgacgacaagagaaccattggtccgctaaagttcaggttgcctctgtcctac
ctcttggtgggaatcgggagcttcggatacagcctgatgctggtgatccggacaatggct
aaaaatgctgacgtcggcggaggagatggagaagaaggcgagttcaccttcgcctggaag
atgttcaccagttgggactacctcatcggcaatgccgaaaccgctgacaacaagtacgcc
tccatcaccaccagcttcaaggaatccatcgtggacgagcaagagaaccagaaggacgag
aacatccacctgcggcggtttctccgggttctggccaacttcctgatcacctgcagtctt
ggcggcagtgggtacctcatctactttgtggtgaagagatcgcaggaatttgcctccagg
gatgacctcagttggtatgagaagaatgagttggagatcatcatgtccctgctgggtttg
gtgtgtccgcctctgtttgagaccatcgccgaactggaggactaccatcctcgaatcgcc
ctgaagtggcagctgggacgcatcttcgccctcttccttggaaacctctacaccttcctg
ttcgccctgtttgatgaggtcaacagtaagctggacgaggaacagtccatcaagaacgcc
tccatctgggccatgaaggagtactacgccaactactcgcgtttgctcaacgattcggac
gccactccgcctccgatgagcccggcagacgtcatcagaggcccctgctgggagacggca
gtcggcatagaatttgtgaaactgaccgtctcagacatccaggtgacctacctgaccatc
ctgatcggcgacttcgcccgcgccgtcatcgttcgtttcctcaactactgctggtgctgg
gacctggaagctggttttccgtcttacggagagtttgacatcagtggaaatgttctcgga
ctggtcttcaaccaggggatgatctggatgggagcgttttacgccccggggctggtgggt
atcaacgtgctccgcctcctcagctccatgtactaccagtgctgggccgtcatggccacc
aacgtcccccatgagagagtcttcaaggcctccaagtccaacaacttctacatggggctc
ctgctcctcatcctcttcctgagcctcctgcccgtcgtttacaccatcatgacgctgccg
ccgtcgtttgactgcggccccttcagcgggcgggcgaagatgttcgatgtgatcatggag
acgatcaggctggatctgccggccttcatggggaccctgttcagctacgcagcgaacccc
ggactcatcatcccggccgtgctgctcatggtgctggccatctattatctgaactcagtc
tccgaagcttaccaaaactcaaacatggagctgaagaagaaaatgcagatggcccgtgat
gaagagaagaaccggagaaataacaaagacagcaccaaccaggtcatgaaagacctggag
gacctgctgcccaaccgatccctcagtccgccgccggagcctggtcagtcacaccagaac
caccgtcacggctaa
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