Xiphophorus hellerii (green swordtail): 116724492
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Entry
116724492 CDS
T07363
Name
(RefSeq) F-box only protein 41-like
KO
K10316
F-box protein 41
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xhe04121
]
116724492
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
116724492
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_FBX41
F-box-like
DUF5559
KIF21A
Motif
Other DBs
NCBI-GeneID:
116724492
NCBI-ProteinID:
XP_032426119
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Position
8:complement(6379714..6392137)
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AA seq
806 aa
AA seq
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MSSSSSSSSSPLPYFCPRCGDRSRFPSVAELRAHLVSRHTYETLLVLSQARLRRSGPALL
PLPGPAATQSEASPLNMEAQGFPLPLACLDLASSSASVQLLRGIFGPPDRARSGQEPCTA
LARPGSLVPGASGVLDLRLTVDIGLEERLGLGLDRKIARTFAEVEEKVNRRVGRLRAELQ
RREAELERKRREREKLWREKKEVEEKAAYLSRQVSAAMEMMERLKTNLAATEAELSERQQ
EMADIELFLRRTAEKEAEAKSRLQVFIETLLERADRAERQLLLLSDNHVTHNRFQYGEPY
SPSELYSPEPGRAGRSLDGSADDIITNKMQESLGNRRSYSVSSSYRLGEPTHNQYHYSGL
SDQMRTLSLGSGGWDCEGGLVHFHPSHCAAHWTPPGREGFRRRDRVWVSEEGWGRTWNKR
NIRHHSTEEEEEEEEEEGLWSSAEMRRLVLARKYTPGSDTPSSIGSTPSRCHANRTPEAD
TLKMRAGLFCVFPYLDVRSLLLAAEVCCDWRFVARHPAVWTRLRLENARVSAEFLQTLSQ
WCTQTQSVILNNLKPRSRRPDETREDYHKNTRGSVEPGVEALLRSAGGSLLHLSVSQCPH
ILTDRTLWMASCYCRNLQRLTYRSSSDPVGQEVLWALGAGCRNISSLQVAPAHPSQQPTR
FGNRCLQTIGRCWPHLRCLSVGGAGCNTQGLVTVVRSCTHLQVLELERIPDLSLQVATEF
CRAGLKSLQMLILTHTPVSGQAILHFHSVCSSIRSIVVDVSVSDYFEEPDTQEAKHLFGE
ILSTLKVLQTRPGLCDALQVRAEGFS
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcctcctcctcctcctcttcctcgccgctgccctacttctgcccccgctgcggc
gaccggagccgcttcccgtccgtggctgagctccgggctcacctggtcagcagacacacc
tacgagaccctgctggtgctgtcgcaggcccggctcaggcgttctggacctgctctcctg
cctcttcctggaccagcagcgacccaaagcgaagcgtctcctctgaacatggaggcccag
ggtttccccctgccgctggcctgcctggacctcgcctcctcctcggcctccgtccagctg
ctccggggaatcttcggcccaccggaccgggcccggtccgggcaggagccctgcaccgct
ctggcccggcccggctctctggttccgggggcttcgggcgtcctggacctcaggctgacg
gtggacatcggcctggaggagcggctgggacttggactggaccggaaaatcgcccggacg
tttgcagaggtggaggagaaggtgaaccggcgcgtcgggcggctgagggcggagctacag
aggagggaggcggagcttgagaggaagaggagagagagggagaaactgtggagggagaag
aaggaggtggaggagaaggcggcgtacctgtccagacaggtttcggccgccatggagatg
atggagcgtctgaagaccaacctggcagcgacagaggcagagctgagtgagcgacagcag
gagatggcggacatcgagctgtttctgagacggacggcagaaaaagaagccgaggccaaa
tccagactgcaggttttcatcgagacgctgctggagcgagcggaccgagcagaacggcag
ctgctgctgctcagcgacaaccacgtcacacacaacaggttccagtacggcgagccgtac
tcaccctcagagctctactcacctgaacccggacgggccggacgcagcctggacggcagc
gccgatgacatcatcaccaacaagatgcaggaaagcctcggcaacaggagaagctacagc
gtctccagttcctacagactgggagagccgacacacaaccagtatcattacagtggcctg
agtgatcagatgcggaccttgtctctgggttcggggggctgggactgtgagggaggactg
gtccacttccacccgtctcactgcgccgcacactggactccaccgggcagagagggattc
aggcggagggacagagtctgggtcagtgaggaaggatggggaagaacctggaacaaaaga
aacattcgtcaccatagcactgaggaagaggaggaggaggaagaggaggaaggcctgtgg
agcagcgctgagatgaggcgccttgttctggccaggaagtacacacctggatcagacacg
ccctcctccattggctccaccccctcccgttgtcatgccaacaggaccccggaggcggac
accctgaagatgagggcggggctcttctgcgttttcccgtatctggatgttcgctcgctg
ctgctggcggctgaggtgtgctgtgattggcggtttgttgctaggcacccagcggtctgg
actcgcctccgactggagaacgctcgagtgtcggccgagttcttgcagactctttctcag
tggtgtactcaaactcagtctgtcatcctcaacaacctgaagccgcgaagccgccggcct
gacgagacgcgagaggattatcacaaaaacactcggggcagcgtggagccgggcgtggag
gcgctgctgcggtcagcagggggcagtctgctccacctctccgtctcccagtgtccccac
atcctcaccgacaggacgctgtggatggccagctgttactgcaggaacctgcagaggctc
acgtacaggagctcctcagatccggtcggtcaggaggttctgtgggctctgggcgctggc
tgcaggaacatcagcagcctgcaggtcgcgccggcgcatcccagccaacagccgactcgg
ttcggaaaccggtgcttgcagacgattggtcgatgttggccacacctccgttgtctcagt
gtgggcggagctggctgcaacactcagggattggttactgttgtgcgcagctgcactcac
ctgcaggtgctggagttggagcgcattcccgacctgagccttcaggtggcgacagagttc
tgcagagccggactgaagagtctgcagatgctgatcctgacccacacgccggtcagcggc
caggccatcctgcacttccacagtgtgtgcagcagcatcaggtccatcgtggtggacgtt
tctgtgtcggactactttgaggagccagatactcaggaagcaaagcacctgtttggagag
attctcagtaccctgaaggttcttcagacccgacccggcctttgtgacgcccttcaggtc
cgagctgaaggattctcctga
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