Xiphophorus hellerii (green swordtail): 116724494
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Entry
116724494 CDS
T07363
Symbol
gtf3c4
Name
(RefSeq) general transcription factor 3C polypeptide 4 isoform X1
KO
K11310
general transcription factor 3C polypeptide 4 [EC:
2.3.1.48
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xhe03021
]
116724494 (gtf3c4)
03036 Chromosome and associated proteins [BR:
xhe03036
]
116724494 (gtf3c4)
Enzymes [BR:
xhe01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
116724494 (gtf3c4)
Transcription machinery [BR:
xhe03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
116724494 (gtf3c4)
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
116724494 (gtf3c4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIIC_delta
DUF5921
zf-TFIIIC
TAF1C_C
Motif
Other DBs
NCBI-GeneID:
116724494
NCBI-ProteinID:
XP_032426121
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Position
8:complement(7906375..7913788)
Genome browser
AA seq
790 aa
AA seq
DB search
MAAASPPDCATPESGNVAIKTEPLDGDDAPPTLRDVPVRRDPVVPLLSPVSGPQPLRWSP
DHRLSVCTSSSLSVLELLYDIHSSRQDLSLNRTSIPVPTQTHKLRVGPPDELSRAVKKFS
LDPDPTVRQVFLADTVINPSVGVHSGMKFASWSPLGCDSCGRCLLACLTLDNRLTVHSSR
GHLEWKLLADLSENYGERLKERGYAKKDSNPPQADLLDLAELQRRFRMQTPLKMEWSSVY
TIKKVQADNSCVDEEMVLLAVLMENGDLVLWKFVLPFADGDDVVFYDLIESGVSRPSDLA
WWEYENSNQRMGGLIVGSEVGPVKIMPVSLSKVKGYCTLRLPVILWKECDEIAVENIRCF
PVIHPIHKTSCSLIVASRGCYIFWCLLMVSPDGLNIHNSHITGLNSLPVVSLVVSQHEVA
VYSCSMDGWIKKLTPTFTESSVIFKVEDLVQPETLTGRWIHGIAVSHNGTYLALVSTPGI
VGSFHPIHKNFQIHFLTLKTPEAAASLLLKSPEQNLFKTADLLDLVKWQVLKTKRVPASL
QEELDRKLQEVDSPYLWRIKLFLARVLHLTLQVPRTENKWKPRRTAVKVLVQDEEEDEEE
AVERVEGEAGGVEGEAEARRAEIQTLMEAAETHLMRDHMKKVLGVVYLNTWVPQNICIPT
CGLMDYLSRDPNDKDSEVLIGHIRKKLNKQTFPERCSLCQAPLPFTDWKQAACENGHVWL
RCVLSYQACQTLTFRRCLLQDCIARLPEPEGKRHFPSSSSSVSQACHPQRQPSPRAGAQI
HAWHVGFPPA
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgccagtccgcctgactgtgctaccccggagtctggaaacgttgcgataaag
acggagcctttagacggggatgatgcgccgcccacgctgcgggacgtgccggttcgacgc
gacccggtggtgccgctgctgtccccggtgagcgggccgcagccgctccgctggtctccg
gatcaccggctgtccgtgtgcacctccagctccctgtccgtgctggagctgctctacgac
atccacagcagcaggcaggacctgagcctcaaccgaacctccatccctgtcccgacccag
acccacaagctgcgggtcggaccgccagatgagctgtcgcgtgctgtaaagaagttctcg
ttggatccggacccgactgtgcggcaggtctttctggcggacacggtgatcaacccatca
gtcggggttcacagtgggatgaagttcgccagctggtctccgttgggctgcgactcctgc
ggccgctgcctcctcgcctgcctaacgctcgataaccgactcaccgttcacagcagccgc
ggccacctggagtggaaactgctggccgatcttagcgagaattacggcgagcggctaaag
gagcgaggctacgccaagaaggatagcaaccccccgcaggcggacctgttggacctcgcc
gagctgcagcggcggttccgcatgcagacccctttaaagatggagtggtcgagtgtttac
accatcaaaaaggtccaggcggacaacagctgcgtggatgaagagatggttctgctcgcc
gtcctgatggaaaacggcgacctcgttttgtggaagtttgtgctgccgttcgcggacggc
gacgacgttgtcttctacgacctcatcgagtccggcgtgagcagacccagcgacttggcg
tggtgggagtacgagaacagcaatcagcggatgggagggctaatcgtcggcagcgaggtt
ggacccgtcaagatcatgccggtcagcctgtcgaaagtgaagggctactgcacgctccgg
ctccccgtcatcctgtggaaggagtgcgacgagatcgcagtggaaaacatccggtgcttc
ccggtgatccacccgatccataaaaccagctgcagcctcatcgtcgcctcaaggggttgc
tacatcttctggtgtttgctgatggtttcaccagacggactcaacattcacaattcccac
ataacgggactcaactcgctgcctgtcgtctccttggtggtcagtcagcatgaagtcgcg
gtctactcctgctccatggacggttggatcaaaaaactgacgccgacgttcacggagagc
tccgttatcttcaaagtagaggacttggttcagccagaaacccttacgggacggtggata
cacgggattgccgttagccacaacggcacataccttgctctggtcagcaccccggggatc
gtcggtagcttccaccctatccacaagaacttccagatccacttcctgacgctgaaaact
cctgaagcggctgcatcgctcctgctcaagtcccccgagcagaacctgttcaaaacggcg
gacttgctcgacctggtgaagtggcaggtcctgaaaaccaaacgcgtccctgcgtcgctc
caggaggagctcgaccgcaaactccaggaagtggactcgccgtacttgtggcgcatcaag
ctctttttggcgcgcgttcttcacctgaccctgcaggtgccgcgcacagagaacaaatgg
aaacccaggcggacggcggtcaaagtgttggtacaagatgaggaagaagacgaggaagag
gctgttgagagggtggaaggcgaggctggtggagttgaaggggaagcagaggcccgaagg
gccgagattcagactctgatggaagcggctgagacgcatctgatgagggatcacatgaag
aaggttttgggcgtcgtgtatctcaacacctgggtgcctcagaacatctgcatccccacc
tgcggcctgatggactacctgtccagggatcccaacgacaaagattcagaggttctgatc
ggccacatccggaagaagctcaacaagcagacgttcccggagcgctgcagcctctgtcaa
gccccgctgcccttcaccgactggaaacaagccgcctgcgaaaacggacacgtgtggctc
aggtgcgtgttgtcataccaggcctgccagacgctgacgttcagacgctgcctcctgcag
gattgcattgccagactgccagagcctgagggtaagcgccactttccatcctcctcctcc
tccgtttcgcaggcttgtcaccctcagcgacagccttcgccccgcgccggcgctcagatc
cacgcctggcatgtcgggtttccacccgcttga
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