Xiphophorus hellerii (green swordtail): 116724535
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Entry
116724535 CDS
T07363
Symbol
gtf3c5
Name
(RefSeq) general transcription factor 3C polypeptide 5
KO
K15202
general transcription factor 3C polypeptide 5 (transcription factor C subunit 1)
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xhe03021
]
116724535 (gtf3c5)
Transcription machinery [BR:
xhe03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
116724535 (gtf3c5)
TFIIIC, fungi type
116724535 (gtf3c5)
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Gene cluster
GFIT
Motif
Pfam:
Tau95
Tau95_N
Pox_Ag35
Sigma70_ner
Hid1
Motif
Other DBs
NCBI-GeneID:
116724535
NCBI-ProteinID:
XP_032426178
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Position
8:complement(7788194..7793991)
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AA seq
543 aa
AA seq
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MAAAGAADQGDVTLNFTLKELSLSGRTGESTPGGSSSVELRNKKLVCVEYPAMVTSVERM
LETLGGEQTVTKTFSDPSRRLEMRFRPRDPFCHSMCGNRLPSSNLLLRVRRRVRKKDPKD
AQIQMDVMGIIGTTYKFQGMVDFQCLAVDSQNGKNVSLYDKIILHKAENQAFFAQDVPYF
LPPAIFSRLDSPVDYFYRPDAVQKLVSSLPLPVSKNFIGLNRARRPHNAIFVSFTDPAVP
SECLEAARVNWGRVCLKEHDLESEEKVKKMFESRPIWSRNALKANLDLHPDKLKLLLPVY
AYYMVTGPWRSLWVRLGYDPRTTTGSKKYQMLDFRIRVSSKYGYTPPNIPVKAKRSTLSY
SLPTTLNKTAPPAASLMDIPAPEGPGTSRDPPPVSFQLKDSAYIFRDGLLPPHRQMFYQL
CDLDVDSIREAISQNNGEERECDERDGWCVVGTTDKLRDIISTMIKKVVREKKPEKQDRL
PKRRRRGHVKYTMKDPKGEDEEEDDEEEEEGDNKEDEEENEDDEFQPSEGSENEMETEIL
DYM
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgcgggtgctgcggatcagggggatgtgacgctaaactttaccctgaaagag
ctgagcctgtccggccggaccggggagtccacgccgggcggctcgtcctccgtggagctg
cggaacaagaagctggtgtgcgtggagtatcccgccatggtgaccagcgtggagaggatg
ctggagactctgggaggagagcagacggtgacgaaaacgttcagtgaccccagcaggcga
ctggagatgcgtttccgaccccgtgaccccttctgccactctatgtgtggaaaccggctc
ccgtcgagcaacctcctcctcagggtgcgacggcgggtccggaaaaaagaccccaaagac
gctcagatccagatggacgtgatgggaatcataggaacgacgtacaagttccaggggatg
gtagacttccagtgcctcgctgtggattcccagaacggaaaaaacgtctctctttacgac
aaaatcatcctccataaagcggagaatcaagcgttcttcgcgcaggacgttccttacttc
ctgcccccggccattttctcacgcctcgacagtccggtggattacttctaccgacccgac
gccgttcagaagctggtgtcgtcgctccctctgcccgtcagtaagaacttcatcggtttg
aaccgcgcccggcggcctcacaacgccatcttcgtcagcttcacggaccccgccgttccc
agcgagtgcctggaggcggcgcgggtcaactggggtcgggtgtgcctgaaggagcacgac
ctggagagcgaggagaaggtcaagaagatgtttgagagtcgacccatctggtcccgcaac
gccctcaaggccaacctggacctccacccggataaactcaagctgctgctgcccgtctac
gcctactacatggtcaccggaccctggaggagcctgtgggtccgactcggctacgacccc
agaacgaccacagggtccaagaaataccagatgctggactttaggatccgggtcagctcc
aaatacggctacactccacccaacataccggtgaaagccaagagaagcaccctgagctac
agtctgccgaccacgctaaacaaaacagctcctccggctgccagcctgatggatattccc
gccccagaaggccccggtaccagtcgcgacccgcctcccgtctccttccagctgaaggac
tccgcttacatcttcagagacggcttgctgcctccacacagacagatgttctaccagctt
tgtgatttggacgtggacagcatcagagaggcgataagccagaacaacggcgaggagcgg
gagtgtgacgagcgcgacggctggtgtgtcgtcggcaccacggataagctgagagacatc
atctccactatgattaagaaggtggtcagggagaagaaaccagaaaagcaagacaggtta
ccaaagagacgacggagaggacatgtaaaatacacgatgaaagatccgaaaggagaggat
gaggaagaggacgatgaagaggaggaggagggtgacaacaaagaagacgaagaggaaaac
gaggatgatgagtttcagccttcagaaggaagtgaaaatgagatggagacagaaatccta
gattatatgtga
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