Xiphophorus hellerii (green swordtail): 116724556
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Entry
116724556 CDS
T07363
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform-like
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03015
mRNA surveillance pathway
xhe04261
Adrenergic signaling in cardiomyocytes
xhe04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116724556
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
116724556
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
116724556
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xhe01009
]
116724556
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xhe03019
]
116724556
03036 Chromosome and associated proteins [BR:
xhe03036
]
116724556
Protein phosphatases and associated proteins [BR:
xhe01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
116724556
Messenger RNA biogenesis [BR:
xhe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
116724556
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
116724556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
116724556
NCBI-ProteinID:
XP_032426211
LinkDB
All DBs
Position
8:8057519..8070319
Genome browser
AA seq
445 aa
AA seq
DB search
MAGPGGDMQWCFSQVKGAIDDDVAEADIISTVEFNHTGELLATGDKGGRVVIFQQEVENK
NLPQFRSEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLW
KISERDKRPEGYNLKEEDGRYRDPNTITALRVPVLIPMDLMVEASPRRVFSNAHTYHINS
ISVNSDDETYLSADDLRINLWNLEITDRSFNIVDIKPANMEELTEVITAAEFHPHQCNTF
VYSSSKGTIRLCDMRASALCDKHSKLFEEPENPSNRSFFSEIISSISDVKFSHNGRYLMT
RDYLSVKIWDLNMENRPVETYQVHEYLRNKLCSLYENDCIFDKFECCWNGNDSVVMTGSY
NNFFRMFERGQRRDATLEASRENSKPLQVLKPRKVCTGGKRKKDEISVDSLDFNKKILHT
AWHPQDNIIAVATTNNLYIFQDKVN
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggcaggacccggaggcgacatgcagtggtgcttctcccaggtgaagggagccattgat
gacgacgtagctgaagccgacatcatatcaacggttgagttcaaccacacgggggagctg
ctcgccaccggagacaagggcggccgcgtcgtcatcttccagcaggaagtagaaaacaag
aacctgccccagttccggagcgagtacaacgtctacagcaccttccagagccacgagccc
gagttcgactacctgaagagtttagaaatcgaggagaaaatcaacaagatccgctggctt
ccccagaagaacgccgctcagttcctgttgtccaccaacgataaaactataaaattgtgg
aaaataagtgaaagagacaagcgaccagaaggctacaacctgaaagaggaagatggccga
tacagagatcccaacacgatcacggcactgcgggtcccggtattaatccccatggacctg
atggtggaggccagccctcgccgggtgttctccaacgctcacacctaccacatcaactcc
atctcggtcaacagcgacgacgagacctacctgtctgcggatgacctgcgcatcaacctg
tggaacctggagatcaccgaccgcagcttcaacatcgttgacatcaagccggccaacatg
gaggagctgaccgaggtgataacggcggcggagtttcatcctcaccagtgcaacaccttc
gtctacagcagcagcaaagggacaatccgcctctgcgacatgcgggcgtcggctctctgc
gacaagcactccaagctgtttgaggagccagaaaaccccagcaaccgctccttcttctca
gagatcatatcgtccatctcagacgtcaagttcagtcacaacggacgctacctgatgacc
agagactatttatctgtgaagatctgggacctgaacatggaaaaccggccggtggagacg
taccaggttcatgaatatctgaggaacaagctgtgctcgctctacgaaaacgactgcatc
ttcgacaagttcgagtgctgctggaacggaaacgacagcgtggtgatgaccggctcctac
aacaacttcttccggatgttcgagcgcggccagcggcgcgacgccacgctggaggcgtcg
cgggagaacagcaagccgctgcaggtcctcaagccgcggaaggtctgcacgggcggcaaa
cgcaagaaggacgagatcagcgtggacagtttggacttcaacaagaaaatcctccacacc
gcctggcatccgcaggacaacatcattgccgtggcaaccacaaacaacctctacatattc
caggataaagtgaactaa
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