Xiphophorus hellerii (green swordtail): 116724755
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Entry
116724755 CDS
T07363
Name
(RefSeq) DNA repair protein XRCC4-like
KO
K10886
DNA-repair protein XRCC4
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
116724755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xhe03400
]
116724755
DNA repair and recombination proteins [BR:
xhe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
116724755
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRCC4_CC
XRCC4
XRCC4_C
SHE3
ZapB
XLF
ALMT
DUF5847
NET2A_C
Motif
Other DBs
NCBI-GeneID:
116724755
NCBI-ProteinID:
XP_032426372
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Position
8:complement(27346409..27366682)
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AA seq
342 aa
AA seq
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MNTSVREIHLSSQADFSYFLRVDWEGRGLGFGFKLLLTDGQKAWRGKVSEAVVNEEAEEL
EMAKEKYIQDLQQALTEPEPSTSYCFTLKPHPPTSSCTVTLTYEKMQKGISFKLGSVLLD
AVEEPAEAVRAVLIHTLQQGNKLQQHNHKLKEENQRLIQEHQYITEKLKHYAEGVETLKA
ELYSRFVLLLNEKKTKIRSLQEALTKLQERRNSEEQKNKNSAKSDQTADHNSEADEYGGS
TDEELKEEQSTGTSHLSSEDSATPSPLNLRDITDVAPCRKRRFRHLGPPELVVKKQDPEA
AQKKRADSSAASNQLQTPQRSVDATKAASAGTSEAEDLFDDF
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaacacatcagtgcgtgaaatccacctctcctctcaggctgacttttcctactttcta
agagtggactgggaggggcggggcttaggcttcggcttcaagttgcttttgacagatgga
cagaaggcatggagaggaaaggtgagtgaggcggtggtgaatgaagaggcagaggaactg
gagatggcgaaggagaagtacatccaggacctccagcaggctctaacagagccagaaccc
tctacctcctactgcttcaccctgaagccacacccacccaccagtagctgcactgtgact
ctgacatatgagaaaatgcagaagggcatatccttcaaacttggctctgtcttgctggat
gctgtcgaggagccagctgaggcggtgagagcggtgctgatacacacactgcagcaagga
aacaaactgcagcaacataaccacaaactgaaggaggagaaccagaggctgatacaggaa
caccaatacatcactgaaaagctgaagcactacgctgaaggtgtagagaccctgaaggca
gagctgtactctcggttcgtcctgctcctcaatgagaagaaaacaaagattcgcagtctg
caggaagctttgacaaagctgcaggaaagaaggaattctgaagaacagaaaaacaagaat
tctgcaaaatcagatcaaactgcagatcacaacagcgaggctgatgaatatggaggcagt
actgacgaagagctgaaggaagagcaatcaacaggaacttctcatctgtcatctgaagat
tctgctactccgagccctttgaacctccgcgacatcaccgatgttgctccttgtcgcaag
cgtcgtttccgccatcttggtcctccagagctcgttgtgaaaaagcaggacccagaggcg
gcacagaagaaaagggcggactcctccgcagcatccaatcagctgcagactccccaacgc
tctgtagatgctacgaaagcagcttcagcaggaacttcagaagctgaagacctatttgat
gatttctga
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