Xiphophorus hellerii (green swordtail): 116724938
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Entry
116724938 CDS
T07363
Name
(RefSeq) probable inactive glycosyltransferase 25 family member 3
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe00310
Lysine degradation
xhe00514
Other types of O-glycan biosynthesis
xhe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
116724938
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
116724938
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
xhe01003
]
116724938
Enzymes [BR:
xhe01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
116724938
Glycosyltransferases [BR:
xhe01003
]
O-Glycan biosynthesis
O-linked Gal type
116724938
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
116724938
NCBI-ProteinID:
XP_032426626
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Position
8:complement(13144797..13155092)
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AA seq
632 aa
AA seq
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MGRSRWLIIWESPLFLGLLTRTRVYGLPRSEAAFSSSPHSTMLLHVLVLAALTSRAECYF
VEEKFPEESGMQPPTVVIAIIARNAAHSLPYYLGALERLNYPKDRISVWAATDHNSDNTT
AILREWLTVMQRFYHYVEWRPMDQPTSYAGEFGPKHWPNSRYEYVMKLKQAALNFARKRW
ADYILYADTDNILTNAETLNLMIAENKSVIAPMLDSPGAYSNFWCGITPQGYYRRTAEYF
PTRYRHRHGCYPVPMVHSTLLLDLRKEGMKKLAFYPPHEDYSWPYDDIIVFAFSCRAAEV
QMYVCNKERYGYLNVPGKPHFTLEDDRLNFVHVHLESLIDGPAMYPSRYVHMFPKQRDLV
GFDEIYLINLRRRPDRRDRMLYSLNELEVDVKVVDAIDGNALNSSDIKFLGVDLLPGYYD
PFSGRTLTKGEVGCFLSHYYIWKEVVDMQMDKALIFEDDVRFEANFKRRVLRLMEEVEQV
ELDWDLIYLGRKQVNPGKEAAVENVRNLVVADYSYWTLSYAISQQGAQKLLNAEPLSKML
PVDEFLPIMYDKHPNEDYKSHFPNRNLQAFSTRPLLVQPCQYAGDPEWVSDTETSTLWDD
DSVRTDWRGSHKTLKGAAPPPEMLSASYRDEL
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgggaagaagtaggtggttgatcatttgggaaagccctctttttcttggactgctgacg
cgtacaagagtctacgggctgcccagaagcgaagcagcattttcatcttcaccacattcc
accatgttacttcatgttttagtcttagcagccttaacttcccgggctgagtgttacttt
gttgaagaaaagtttccggaggagtccgggatgcagcctcccaccgtggtgatcgcgatc
atagccaggaatgcagcgcattccctgccgtactacctcggagctctggagagactcaac
taccccaaagaccgcatctctgtgtgggccgcgacagatcacaactcagacaacaccaca
gccattctgagagagtggctcactgtcatgcagagattttaccattacgttgagtggagg
ccaatggaccagccgacgtcttatgcgggggagtttggtccaaagcactggcccaacagc
agatatgagtatgtgatgaaactgaagcaggcagctctcaactttgccagaaaacgctgg
gctgactacatattgtatgctgacacagacaacatcctcaccaacgcagaaaccctcaac
ctgatgattgcagagaacaagtcagtcattgctcccatgttagactccccgggagcgtat
tccaacttttggtgcggtatcacaccgcagggttattatcgacgaacagcggaatacttc
ccgacacgttaccgccacagacacggctgctaccccgtgccgatggtccacagcaccctg
ctgctggatctgaggaaggaaggcatgaagaaactagctttctaccctcctcatgaagac
tactcatggccctatgacgacatcatcgtttttgcattttcctgccgggctgcagaggtc
cagatgtacgtgtgcaacaaggagcgctatggctacctaaacgttcccggcaaacctcat
tttacgctggaggacgatcgtctcaactttgtccatgtccatctggagtcactgattgat
gggcccgccatgtatccttctcgatacgttcacatgttcccaaagcagagagacctggta
gggtttgatgagatctatctgattaacctgcgacgccggcctgaccgcagagacaggatg
ctgtactccctaaacgagctggaggttgacgtcaaagtggtagatgctatagatggaaat
gcactgaacagcagcgacattaagttcctgggtgtcgacttgctgccgggttactatgac
ccgttctctggacgcacactgaccaaaggagaggtgggctgcttcctcagccactattac
atctggaaagaggttgtggacatgcaaatggacaaagccctgatctttgaggatgacgtt
cgcttcgaggcaaacttcaagcgacgagtgctcaggttaatggaggaggtggagcaggtg
gagctggactgggacttaatatatcttggcaggaagcaagtgaatcctggaaaggaggcg
gcggtggagaacgttcggaacctggtggtggccgactattcgtactggactctgtcctac
gccatctctcagcagggagcccagaaactgctcaatgctgagccgctctctaagatgctc
cctgtcgatgaattcctccccatcatgtatgacaaacatcccaatgaggactacaagtcc
catttccccaacagaaacctgcaagccttcagcacacgcccccttctggtacagccatgt
caatacgccggcgatcctgagtgggtgagtgacacagagacctccacgctgtgggatgat
gactcagtaaggactgattggagaggctcccataaaacactgaagggggctgcgccaccg
cctgagatgctgtctgcctcctacagggacgaactttag
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