KEGG   Xiphophorus hellerii (green swordtail): 116725009
Entry
116725009         CDS       T07363                                 
Name
(RefSeq) nuclear factor 7, brain-like
  KO
K12012  tripartite motif-containing protein 35
Organism
xhe  Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:xhe04121]
    116725009
Ubiquitin system [BR:xhe04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    116725009
SSDB
Motif
Pfam: PRY zf-RING_UBOX zf-C3HC4 zf-C3HC4_4 U-box zf-C3HC4_2 zf-C3HC4_3 SPRY zf-B_box zf-RING_2 zf-RING_5 zf-Nse Prok-RING_4 zf-rbx1 zf-ANAPC11 DUF4618 zf-RING_10 Sina_RING UPF0242 Perilipin CYP38_PsbQ-like
Other DBs
NCBI-GeneID: 116725009
NCBI-ProteinID: XP_032426734
LinkDB
Position
8:1322131..1324220
AA seq 461 aa
MASRSDDDLCCPVCLEIFKDPVILSCSHSFCKECLQKYWRTRTGRSCPLCRKRSASDAPP
FNLSLKNLCESFLQQREQRASEDLCSLHSEKLKLFCLDHQQPVCLVCSHSDLHKNDKFKP
IDEAAQQHKKNLQETLEPLKKKLELRKKVQEEFDQTAEHLKVQARHTERQIMEQFKQLHQ
FLAEEEEARLAALREEEEQKRGMMKEKMEALSREIAALSDTVRATEEELRAEDVSFLHNY
KAAVERVQRCPLLEDPQLPSGALIDQAKHLGNLAFNIWSNMENMVTYTPLVLDPNTAGKK
LHLSEDLTNGRRGEKQQLPDNPERFDINWCSVVSSAGFNSGNHSWAVDVGDSEAWILGVL
ESDQRKGGSQTRWLVVAFGSRKYTTCSPSVPPKDLSVQKNLQRIRVNLDWDRGKLSFSDL
DTNTHIHTFTHTFTHKVFPYFNTLKTLKIVPMKISVIKQQL
NT seq 1386 nt   +upstreamnt  +downstreamnt
atggcttccagatcagacgatgatctctgctgtccggtctgtctggaaatatttaaggat
ccagttattctgtcatgtagccacagcttctgtaaggagtgtctgcagaaatattggaga
acaagaactggtcgctcatgtcctctttgtaggaaaagatctgcatccgatgctccacct
tttaatctgtctctgaagaatctctgtgagtctttcttacagcagagagagcagagagct
tcagaggatctctgctctctgcactctgagaaactcaaactcttctgtctggaccatcag
cagccagtttgtctcgtctgcagtcattcagatttacacaaaaacgataaattcaaaccc
atcgatgaagctgctcagcaacacaagaagaaccttcaggaaactctggagcctttaaag
aagaagctggagctcaggaagaaagttcaggaggagtttgatcagacagcagaacacctg
aaggtccaggcccgacacacagagaggcagattatggagcagtttaagcagcttcatcag
tttctagcagaggaagaggaggccaggctggctgcactgagggaggaagaggagcagaag
agagggatgatgaaggagaagatggaggctctgagcagagagatagcagctctttcagac
acagtcagagccacagaggaggagctgagagctgaagacgtctcattcctgcacaactac
aaggctgcagtggaaagagtccagcgctgccccctgctggaggatccacagctgccctca
ggagctctgatagaccaggccaaacatctgggcaacctggccttcaacatctggagcaac
atggagaacatggtgacctacactcctctggttctggacccaaacacggctggtaaaaaa
ctccatctgtctgaagatctgaccaatgggaggagaggagagaaacagcaacttcctgat
aatccagagagatttgatattaactggtgttctgttgtgagttctgctggttttaactca
gggaaccacagctgggctgttgatgttggagacagtgaagcctggattcttggtgtgtta
gagtctgatcaaaggaagggaggatcacagaccagatggttggttgttgcattcggttca
cgtaaatacacaacatgttctccatcagttcctcccaaagatctctcagtccagaagaat
ctccagaggatcagagtgaatctggactgggacagaggaaagctgtccttctctgatctg
gatactaacacacacatacacaccttcacacacaccttcactcacaaggtgtttccatac
ttcaacactcttaaaacattaaagatcgtaccgatgaagatctcagtgatcaagcagcag
ctctga

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