Xiphophorus hellerii (green swordtail): 116725016
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Entry
116725016 CDS
T07363
Name
(RefSeq) calmodulin-regulated spectrin-associated protein 1-B-like isoform X1
KO
K17493
calmodulin-regulated spectrin-associated protein
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xhe01009
]
116725016
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xhe04812
]
116725016
Protein phosphatases and associated proteins [BR:
xhe01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116725016
Cytoskeleton proteins [BR:
xhe04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
116725016
Intermediate filaments
Intermediate filament-binding proteins
116725016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAMSAP_CKK
CAMSAP_CH
CAMSAP_CC1
CH
DUF3158
Motif
Other DBs
NCBI-GeneID:
116725016
NCBI-ProteinID:
XP_032426755
LinkDB
All DBs
Position
8:20199105..20218388
Genome browser
AA seq
1560 aa
AA seq
DB search
MDVNAGRDSTWRRTTAVAAAADDDEDDGGGGGGEVGESMEAQVVQLKLYDCARAKIEANL
RWLFAKAYGHDHIPSDLRDPFYTDQYEQEHIKPPIIHLLLSGELYNRVCGLILPAEQAAY
LQSHQSVIQALSRKGIYVLETNSTPVSDIDLSSSPIKMSAHIHLIDALMMAYTVEMISIE
KVVSCVKRFSNISASKELPYNLEEAMILWINKITIKMRELTDKECKMKQHLLESPSHHKS
PSKWYWKLVPVRYRRDHLSGRTLQHFPLVEDILKDVNDGTALLAVIHFYCPEVVKLEDIC
LKEVPSIADSMYNIQLLKEFSSEYLNKCFFLNPEDLFYSPPVLKNNVMVFIAELFWWFEN
VKPDFVHPRDLQDVKDVRVLLQPKHSRSYVPVSNVTKRSFMPSSNSVDILTTTSTNDQSA
TSSSSPSHSLLPLRQRQNLVEKSTSDLRKRSNSMARTDGQHQDSIVAWPERRTRPLSQPV
PHAVHFAKEDDADSISLARTISKDSLASNIISITPKHMLGSSLPQYRLSGQSLLSHMRIE
DEEEEIEEEELVSVIHPSGFSRHRIGSDMEQDELEAQKLTSSTRASDGSRVFRHDASPFA
LDCQTDSYYLEPLMPTIPKPAKEKGILLNKQEESGESCSRAVAVKTRTTNIPFSSRKKLC
VVDSVPSTSRPRTDGSVGSSESPGFFLHLAFEPEKTPHTTMIKAGHDSDSDIADLEEDDE
DDQRELEKTLRGNRLFEGNMAEFGDGEVESAKLREDLKVSEHEDKEDASGRSSPCPSTVS
WASSCSASGSAGIKMTSFAERKLLKLGLRDGYSSTSSSQKTTPDGSEILSQWQAKEPSTM
LGKNVMAGPVVPSELLQLHMQLEEQRRAIEYQKKKMEALNAKQRLKLGKAAFLNIVKKGG
GRSDTLPLPMKHSLESSGSTAAERRKAKTQACKDDSCLDSLKSQTDRRTITRDDSWNTLT
QSNRSEPDFNECSNSIDLLNQAISSIQQQMMQLSLQQDLLMKQSVVSPPDHTQTEKSTDS
GIDSNTPQTVSSTSDSRSFAVHFVDIGSSTSMPFRRPPKLSSSQRSKAAERKQNKANNKS
ALTKSTKPLPDSDISSRECNDGELETAGVQRVQRNSTFRVHESNGDGDVHLSDKLKSQDP
PVITKTSESASQDAEEEEEQTTNYNKQNVDVDESGRIRSQLIEVDLSEVKDPVEDGGADI
TDGTAEGEQKGVLGFFFKDDEKAEDEMAKRRAAFLLKQQRKAEEARHRKQQQEAESEIKR
DEARRKAEEERIRKEEEKARRELIKQEYLRRKQEALMEEQGLVKPRTKTKPRGSRPKSMH
RGYSSSLPKGSTTRDSLKVSMLMKNQSSGAASRGADLSFSHRGSTLSLAMDPDSVISGGA
DSNRAPSVCSVDSFPMLSRASSRNMDRDWENGSIASSITSMEYNGPKLFKEPSSKSNKPI
IINAIAHCCLAGKVNEVQKNVTLEELEKCESNHLFILFRDGGCQFRAIYTYSPDTEVIIK
YTGIGPRAITQKMIDKLYKYNSDRKQFTVIPAKTVSVSVDALTIHNHLWQIRRPGSARRK
NT seq
4683 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgaatgctggcagggacagcacctggaggagaacaacagcagtagcagcagca
gctgatgatgatgaggatgatggaggcggcggaggaggagaagtaggagagagcatggag
gctcaggttgtacagctgaagctctatgactgcgccagggccaaaatagaagcaaatctc
cgctggttgtttgccaaagcctatggtcacgatcacatcccttcagatcttcgagaccca
ttctataccgaccagtatgagcaggagcacatcaagccccccatcatccacctgctgctg
tctggagagctctacaaccgtgtgtgcggactcatccttcccgctgaacaggccgcctac
ctccaaagccaccagtctgtcatccaggccctgtccagaaaagggatctatgtcctggag
accaacagcacaccagtgtctgacatagacctcagctcttctcccattaaaatgagtgcc
cacatccacctcattgatgctctgatgatggcctacacagtggaaatgatcagcatagag
aaggtggtgtcgtgtgtcaaacgcttttcaaacatcagtgcctccaaagagcttccttac
aacctggaagaggctatgatcctttggattaacaagattaccataaaaatgagggagcta
acagataaagagtgtaaaatgaagcagcacttactggagtcacccagccaccacaagtct
ccctccaaatggtactggaagcttgtacctgtgcggtatcgcagagatcatctttcaggt
cgcactcttcagcacttccccttggtggaagacatattgaaggatgtgaacgacggcaca
gctctgcttgctgtgatccacttctattgcccagaagttgttaaactcgaagatatttgc
ttaaaggaagttccctccatagcagacagcatgtacaacatccagctgctgaaggagttt
tccagtgagtatctgaacaagtgcttcttcctgaacccagaggatctgttctactcacca
cctgtgttgaagaacaatgttatggtcttcattgctgagcttttctggtggtttgaaaat
gtgaagcctgactttgtacatcccagagaccttcaggatgtcaaagatgtgagagtgttg
ctgcagcccaaacattctcggtcctatgtacctgtctcaaatgtcactaaacgaagcttc
atgccttcatcaaactcagtggacatcttgaccacaacctccacaaatgaccaaagcgcc
acatcatcctctagtccatctcattcattactgccactgagacagagacaaaatttggtt
gagaagagcacttcagatttgagaaaaaggtcaaactcaatggcgcgaacagatggacaa
caccaggactcaatagtggcgtggccagaaagaaggacaagacctttgtcccaaccagtg
ccacatgctgtgcattttgccaaggaggatgacgcagacagcattagcctcgctcgcacc
ataagcaaggacagcttggcctctaacatcataagcataaccccaaaacacatgctgggg
tccagtctgcctcagtaccgactcagtggccaaagtctgctcagtcacatgcgcatagaa
gacgaagaggaggaaatagaggaggaggaactggtttctgttattcacccatctggtttt
tctcgacaccgaattggcagtgacatggagcaggatgagctggaagcgcagaaattaaca
tcgtccaccagggcttccgatggctctcgtgttttccgtcacgatgcaagcccctttgct
cttgactgtcagacagacagctactatctggagcctttgatgccaactatccctaagcca
gccaaggagaagggtatattgctgaacaagcaggaggaaagtggggagagttgcagcagg
gcagtagctgtcaaaacaagaactacaaatattcctttctcttcaagaaagaaactctgt
gtggttgattcagttcccagtacttccagaccccgtacagatgggtcagttggtagctca
gagtctccaggcttttttcttcacctggctttcgaaccagagaagactccacataccaca
atgataaaggcagggcatgactctgattcagatattgcagaccttgaggaagatgatgag
gatgatcagagagagctggagaagacgctgagggggaatcgtttatttgagggcaacatg
gcagaattcggagacggagaagttgagtcagcaaagcttcgagaagacttgaaggtaagt
gagcatgaggataaggaagatgcaagcggacgttcaagtccttgtcccagcactgtgtcg
tgggcaagcagctgcagtgcttcgggcagcgcgggaatcaagatgaccagctttgcagag
agaaagctgcttaaacttggccttcgtgatggatactcaagtacgagcagctcccaaaag
actacgccggatggttctgagattctctctcagtggcaggcgaaggagcctagcaccatg
ttggggaagaatgtaatggctggtccggttgtgccttcagagctgctacagcttcacatg
cagctggaagagcagaggcgtgcaatagaatatcagaagaagaagatggaagccctgaat
gctaagcagagactaaagcttgggaaagctgcatttttgaacattgttaaaaagggtgga
gggaggagcgacacacttcctttacctatgaaacactcccttgaatcttctggatcaaca
gctgcagagaggaggaaagcaaagacccaagcttgtaaagacgattcctgtctcgattct
ctgaaaagtcaaacagacaggaggacaataacaagagacgacagctggaacacccttacc
cagagtaatcgctctgaaccggatttcaacgaatgttcaaactccatagacctgctcaat
caagctattagctccatccagcaacagatgatgcagctttcccttcagcaagatcttcta
atgaagcaaagtgttgtctcaccaccagaccatacacaaacagagaaaagcacagattct
gggatagactccaacacaccccaaacagtatcctctacctcagactcaagatcctttgca
gttcactttgtagacattggcagcagcacttcgatgccttttcgccgtccccccaaactc
agttccagccagcgcagtaaagcggcagaacgcaaacaaaataaagcaaataacaagtct
gccctaaccaaatccaccaagccactcccagatagtgacatttcttcaagagaatgtaat
gatggagaactggagacagctggagttcagagggttcagaggaactctaccttcagagtc
catgaaagcaacggagacggagatgtgcacttatcagacaaactgaaatcgcaagaccca
ccagttattaccaagacgtctgaatctgcatcacaggatgcagaggaagaagaagaacaa
accaccaactacaacaaacagaatgtcgacgtcgatgagagcggcaggatcaggagtcag
ctgatcgaggttgacctgtcagaggtcaaggatccagtggaggatggcggtgcagatatc
acagacggcacagcagaaggagagcagaaaggagtgctgggcttcttctttaaggacgat
gagaaggcagaggatgaaatggcaaaacgccgtgctgccttcctcctcaaacagcagcgc
aaagctgaggaggcgagacaccgcaaacagcagcaagaagcagagagcgagatcaaacgt
gacgaggcacggcgtaaggcggaggaggagcgaattcgtaaggaggaggagaaggcccgt
cgagagcttattaaacaggagtatctgcggcggaagcaggaagcccttatggaagagcag
ggtctggtcaagccccgcaccaagaccaaaccccgcgggagcagacccaaatcaatgcac
cgaggatattccagcagccttcctaaaggatccaccacacgtgattctctgaaggtgtct
atgttaatgaaaaaccaaagttcaggagcagccagcaggggagctgatttaagcttcagt
catcgtggatcaacactttccctagcaatggatccagacagcgttatctctggtggggca
gactcaaacagggctccatctgtgtgctctgtggattcgttccccatgttgagcagagct
tccagcaggaacatggatcgggactgggagaacggctccatagcctcatccatcacttca
atggagtacaatggtcctaaactcttcaaggagcctagctcaaaatccaacaagccaatc
atcatcaatgccatcgcccactgttgcctggctggaaaagttaatgaggtccagaaaaat
gtcacccttgaggagttggaaaagtgtgaatccaaccacctgttcatcctcttccgcgac
ggcgggtgtcagtttcgcgccatttacacgtactcaccagacaccgaggtgatcatcaag
tacacaggcattgggccgcgcgccatcacgcaaaagatgattgacaaactgtacaagtac
aattcagaccgcaagcagttcaccgtgatccccgccaagaccgtgtccgttagcgtggac
gctctgaccatccacaatcacctgtggcagatcaggagaccagggagcgctcgcagaaaa
tga
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integrated database retrieval system
