Xiphophorus hellerii (green swordtail): 116725085
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Entry
116725085 CDS
T07363
Symbol
snrpd3
Name
(RefSeq) small nuclear ribonucleoprotein Sm D3
KO
K11088
small nuclear ribonucleoprotein D3
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116725085 (snrpd3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xhe03019
]
116725085 (snrpd3)
03041 Spliceosome [BR:
xhe03041
]
116725085 (snrpd3)
03032 DNA replication proteins [BR:
xhe03032
]
116725085 (snrpd3)
Messenger RNA biogenesis [BR:
xhe03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
116725085 (snrpd3)
Spliceosome [BR:
xhe03041
]
Complex A
U1 snRNP components
Sm proteins
116725085 (snrpd3)
U2 snRNP components
116725085 (snrpd3)
Complex B
U1 snRNP components
116725085 (snrpd3)
U4/U6.U5 tri-snRNP components
116725085 (snrpd3)
Complex C
U2 snRNP components
116725085 (snrpd3)
DNA replication proteins [BR:
xhe03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
116725085 (snrpd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Kringle
Motif
Other DBs
NCBI-GeneID:
116725085
NCBI-ProteinID:
XP_032426874
LinkDB
All DBs
Position
8:12699383..12703283
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AA seq
127 aa
AA seq
DB search
MSIGVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDGRVAQLEQ
VYIRGSKIRFLILPDMLKNAPMLKSMKNKNQGSGAGRGKAAILKAQVAARGRGRGGIGRG
NIFQKRR
NT seq
384 nt
NT seq
+upstream
nt +downstream
nt
atgtccattggcgtgccaatcaaggtcctgcatgaggccgagggacacattgtgacctgt
gagaccaacacaggagaggtgtacagaggcaagctgattgaagctgaggacaacatgaac
tgtcagatgtccaacattaccgtgacctatcgggatggtcgggtcgcgcagttggaacag
gtctacatccgaggaagcaagatccgctttctgatcctacctgatatgttaaagaatgct
cccatgttaaagagcatgaagaacaagaaccagggttctggcgcaggaagaggcaaagct
gccattctaaaagcacaagtggctgcaagaggacgaggtcgtggtggaattggaagaggc
aacatcttccaaaagaggcgataa
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