Xiphophorus hellerii (green swordtail): 116725222
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Entry
116725222 CDS
T07363
Name
(RefSeq) LOW QUALITY PROTEIN: vesicular inhibitory amino acid transporter-like
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
116725222
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xhe02000
]
116725222
Transporters [BR:
xhe02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
116725222
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aa_trans
DUF8060
Motif
Other DBs
NCBI-GeneID:
116725222
NCBI-ProteinID:
XP_032427027
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Position
1:complement(10536514..10541968)
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AA seq
523 aa
AA seq
DB search
MAHLIRHKISNKLTNAAHTVSNKSQAKVSGVFARLGFQAATDEEGLGFAECDDLDYDYRQ
GMQMDVLRGEEEEGGDMEGEGDVEGDTRYQRDGTGPRQSTLKSGGSLEEDKPKITSWEAG
WNVTNAIQGMFVLGLPYAILHGGYLGLFLIIFAAVVCCYTGKILIACLYEDNEDGIKVRV
RDSYVDIANACCAPRFPALGGHVVNVAQIIELVMTCILYVVVSGNLMYNSFPGFPVSQKA
WSVLATAALLPCAFLKNLKAVSKFSLLCTLAHFVINVLVIAYCLSRAREWAWEKVKFYID
VKKFPISIGIIVFSYTSQIFLPSLEGNMQKPSEFHCMMDWTHIAACVLKGLFALVAYLTW
ADATKEVITDNLPSTIRAVVNLFLVAKALLSYPLPFFAAVEVLEKSLFQDGGRALFPDCY
GPGGQLKTWGLGLRVGLVVFTLLMAVFVPHFALLMGLTGSLTGAGLCFLLPSLFHLKLQW
RNLLWHHVFFDVSIFVIGGICAISGFIHSIEGLIEAYKYDIHD
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggctcatctaatccgacacaagatcagcaacaaactgaccaatgcggcccacacggtg
tccaacaaatcccaggccaaggtcagcggggtgttcgcccggctgggcttccaggccgcc
acggacgaagagggtctgggctttgcagagtgcgatgacctggactacgactacaggcaa
gggatgcagatggacgtcctccggggggaagaggaggaaggaggagacatggagggagag
ggggacgtggagggggacacccgctaccagagggatggtaccggtccgaggcagtcgacc
ctgaagagcggcggctccctggaggaggacaagcccaaaatcacgtcatgggaagctgga
tggaacgtcaccaatgccattcagggcatgttcgtcctcggcctgccgtacgccatcctc
cacggcggatacctcggcctcttcctcattatcttcgcggcagtggtgtgttgctacacg
ggcaaaatcctcatcgcgtgcctgtacgaggacaacgaggacggcatcaaggtgcgcgtc
agagactcgtacgtggacatcgccaacgcctgctgcgcgccccgcttccccgcactcggc
ggccacgtggtgaacgtggcgcagatcatcgagctggtcatgacgtgcatcctgtacgtg
gtggtcagcggcaacctgatgtacaacagcttccccggcttcccagtttcccagaaggcc
tggtcggtgctggccacggccgcgctgctgccctgcgcgttcctgaagaacctcaaggcc
gtctccaagttcagcctcctgtgcacgctggcgcacttcgtcatcaacgtcctcgtgatc
gcctattgtctgtccagggcacgcgagtgggcgtgggagaaggtcaagttctacatcgac
gtgaagaagttccccatttccatcggcatcattgtgttcagctacacctcccagatcttc
ctgccctccctggaggggaacatgcagaagcccagcgagttccactgcatgatggactgg
acccacatcgcagcctgcgtcctcaagggcctcttcgccctggtggcctacctgacctgg
gcggatgccaccaaagaggtcatcacagataacctgccctcgaccatccgggctgtggtg
aacctctttcttgtcgctaaggcgctcctgtcctaccctctgccgttctttgcagctgta
gaagtcctggagaagtcactgttccaggacggcggcagagccctctttcctgactgctac
ggccccggtgggcagctaaaaacctggggtcttggcttaagagtaggtctggtggtcttt
accctgctcatggccgtctttgttccgcattttgccctgctgatgggtctaactggaagc
ctgacgggtgcaggcctgtgcttcctcctaccgagcctcttccacctgaagctccagtgg
agaaaccttctgtggcaccacgtcttctttgatgtctccatttttgttattggaggcata
tgtgccatatcaggcttcatccactccattgaagggctcatagaggcctacaagtacgac
atccatgactga
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