Xiphophorus hellerii (green swordtail): 116725247
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Entry
116725247 CDS
T07363
Name
(RefSeq) methyl-CpG-binding domain protein 5-like
KO
K26585
methyl-CpG-binding domain protein 6
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
116725247
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xhe03036
]
116725247
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
116725247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
Med14
Motif
Other DBs
NCBI-GeneID:
116725247
NCBI-ProteinID:
XP_032427071
LinkDB
All DBs
Position
1:10594130..10614368
Genome browser
AA seq
1521 aa
AA seq
DB search
MMGGSEIVSRDKDAVHVAAIHVPIGWLRRAERGQVTYVSPSGTTLSTLDEVKAYLLTDGT
CKCGLECPLIIHKVFNFSVGVKVEQNSQPSCKAEQDMTKLCNHRRKVVAMAALCRSMQAS
QLPFTNFHHPDVTRGDSGDPKKEHSELKEDERGLFYSKHNPVPTRGHNNLHPNPSPSPKS
SHHFIYPYNGSSPVPNTGTNCHHPLDAFRRHHHHPPLPAASTASTSSSFPPHSPAQRSPH
TPTPQNTSQGQITPKTPDTPSSPWLGHLSSPPPSSPMTLGGVRGGQTHYPLTPLSPSNSF
SPSVHPMGLPSQQRSRHPSASPSSASEHGGGSTPAEGGGGLMGNNLPHRRKSASSSPHSP
VPCGSPLPSPHFPKYKLEDILEQFKNSGNSSTNNHHILNPTNSSLPTNQSTSHPHAVSSK
PTKGTVTPADSARPKGFGLSQSAPSNLSLGPLLNHHYSHQGKLPHPVSFPASTLLSAAAK
AQLANQITQGSNASSSAGNLHSTLDVLKEAQQQQKVTNSTLHNSIASSSIASARLPHPSL
AAASAVLFPPSQTLAQSLVSSSPHPPPTAERGAAHRKRRRRSPTVVGALRDMLPLANGVR
KAAADEAASATVINLSSSSTSFPSSFSHSYSTSVVQNQSTVTLENHHPSLPRLSAPPGHL
STSPLPNETRSFTTAPTPMPLSIDPPTQPLSALLHLLSVQNAQATASHSASAPSRPAEGG
GHTNEPNLRQSPPSTSSNARTQQSRPVCQTDDTNLLPLVQLSSPSPSSSVTLQSHSPPQS
TISTPLQRGSPCKSNEVFQSNSDPSQRMTSSLADTDQPSDNYIHTSDSLSQASSYTASPR
RAVAVETGSSSPLTSVNLNQAEGKASAGVPSSPKPLDLSNHVLALFSASSTVTQAEGDSS
NHAAEDDATSTENPAAVQVEHEHLDPKTPPASTSPTFSVSAPHEGSHSPASSTGVGETAA
PLALAEAFPFMNQEQLLQLLSSTGGLPSLLDSTVLASLPLGGLWLGGQHAQLPPASVTPQ
PPPNLAEPHQPEQPHLLVQETQQQNQEQKQQQVNNNPLFPLLPLLSSGHGELPLNLLGLL
NPLAASAPSAGQEPDLTERSSLQALLMASVLVGQQPTSLLPLSVLGHLNQISLEVPIHHS
QQIPGTLEGLSLDKTSGLLDPTSGLLDITHGLLPLTTGAENPIQALQSLLLPAALPPPPA
AFLPLSPALLTAALSSAELHSPPNTQLAPAQQTQHAQPQVPTDTAVDTLIPVSLQGKDNS
LLQQLLPTLLNPSMLGDVPGITGLQNMVGLGAGSILLSPVQASALGLLQSPDGGINLLNN
IQLNLAPPSDGEKPGSLQETQRPASHEGLPASEIAPEVSPCAVSALGPPPAQESPPPAQR
GSEGRSVIDPYTSFMDTIYTSFLQVSAKEQEDGAQLGPSDPTSPFCALPPVSFPLEHQSS
STNAPTLPQASAPCLPEPTASLLAPQPGLITTQPGSCRSFSGPGDAQANRGRAYVPATEE
ASHRGTHPPGATFAPHILGGG
NT seq
4566 nt
NT seq
+upstream
nt +downstream
nt
atgatgggaggcagtgagatcgtcagcagagacaaggatgcggtccacgttgctgcaata
catgtccccattggctggcttcggagagcggagagagggcaggtgacctatgtcagtccc
agtggcaccaccctgtccacactggatgaggtcaaagcctacctgctgactgatggcacc
tgcaaatgtggtctggagtgcccactcatcattcataaggttttcaacttcagtgtgggc
gtgaaagtggaacagaacagtcagccgtcatgtaaagcagagcaggacatgaccaaattg
tgcaatcaccgcaggaaagtggtggcgatggctgctctgtgtcggagtatgcaggcctca
cagcttccattcaccaactttcatcatccagatgtgactcgaggggacagcggggatcca
aaaaaggaacattcagagctcaaagaggacgagcgtggacttttttattcaaaacacaat
ccagtaccaactcgggggcacaacaaccttcacccaaacccttcccccagccccaaatcc
tcccatcacttcatctacccttacaatggttcctcccctgttccgaatacaggcacaaac
tgtcatcaccctctagatgcttttagaagacatcatcatcatcctcctctcccagcagcc
tccactgcttccactagctcttcgtttccacctcacagccctgcccagaggtcaccccac
acacccacgcctcaaaacaccagtcaaggtcaaataacacccaaaacccctgacacccct
agctctccctggttaggtcacctgtcatcgcctcctccctcttcccctatgactcttgga
ggagtgagaggaggacagactcattaccctttaactcccctttctccatctaactccttc
tctccctcggtgcaccccatgggtttgccttctcaacagcgatcccgccacccgtctgcc
tctccttcctctgcgtccgagcatggaggaggttccacgccggccgaaggaggaggagga
ctgatgggaaataacttaccccacaggaggaagtctgcctcttcctctccgcactcccca
gtcccctgcgggtcccctcttcccagcccccacttccccaagtacaagctggaagacatc
ttggagcagtttaagaactcaggcaacagtagcactaacaaccaccacatcctgaacccc
actaactcttctttacccaccaaccaaagcaccagtcacccacatgccgtttcctcaaag
cccaccaagggcaccgtgactccggccgacagtgcgagaccaaaaggtttcggtttgagt
cagtcggcgccctctaacttgtctctggggccgctgctgaatcaccactatagccatcag
ggcaagctgccacacccagtttcgttccccgccagtaccctgctctccgcagcggccaag
gctcagctggccaaccagatcacccagggctcaaacgcgtccagcagcgcagggaacttg
cactccactctggatgtgttgaaagaggcccaacagcaacaaaaggtaacaaacagcact
ttacataacagcatcgcttcttcttccatcgcttctgctaggcttcctcatccctccctc
gcagcggcttctgctgttctctttcccccgtcccaaactctagcccagtccctcgtgtcc
tcctcgccccacccacccccgacagcagaacggggcgcggcacacaggaagaggcggcgg
cgatcccccacagtcgtcggcgcgctgagagacatgctgccactcgccaacggagtccga
aaagcggcagctgacgaggccgcatctgctacggttatcaacctttcctcttcttccaca
tccttcccctcctccttctcacactcctactctacctcagttgtgcaaaatcagagtaca
gtcacattggaaaaccatcatcccagcctccccagactctccgctcctccgggacatctg
tccacgtctcctctgccaaacgagactcggagtttcactacagcccccacacccatgcct
cttagcatagaccccccaacccaaccgctgtccgctttgttacacctgctcagcgttcag
aacgcgcaggctactgcgtcacactctgcctcagctccgtctagacctgccgaaggtggt
ggacacactaatgaaccgaacttgaggcaatccccaccttctacttcttctaatgccaga
acacaacagagtcgacccgtatgccaaacagatgacactaatcttttacccctagttcag
ctttcttccccttccccctcctcttctgtcacattacagtcccactctcctccacagtcg
actatatcgactcctctccaaagaggctctccttgtaagtcaaatgaagtttttcagagc
aactctgacccgtctcagcgaatgacttcctctctcgccgacacggatcagccgtctgac
aactacattcacacgtcagactcgctttcccaggcgtcttcgtacacggcctctcctcgg
agagctgtcgccgtggagaccgggagcagcagcccactaacatcagtgaacctgaatcag
gcagaaggcaaagcttctgcaggagtaccctcttctccgaagcctctggatctcagtaac
cacgtcctggctcttttctctgcgtcctccactgtgactcaggcggagggggattcctcc
aaccacgccgccgaagatgatgcaacttccacagaaaaccctgcagcagtacaagtggaa
catgaacatttagatccaaagacgcccccagcctccaccagccccaccttcagtgtctct
gcgccccacgaggggagtcacagtcccgctagctcgaccggtgtgggagagaccgcggct
ccgttagcgctggcggaagcttttcccttcatgaaccaggagcagctgcttcagctgctg
tcatccacaggaggtttaccgtcgctcttggattccacagtcctggcatcattgccctta
ggggggctctggctgggagggcaacatgcgcagttacctcccgcctctgttacgccacag
ccaccaccgaacctcgcagagccgcaccaaccagagcagccgcatttactggtgcaggaa
acgcagcaacaaaaccaagagcagaagcagcagcaggttaacaacaaccctttgtttcct
ttgctgcccctgttgagtagcgggcacggggagctgccgctgaaccttctgggcctgctg
aacccgctcgctgcctcggcgccgtctgcaggacaggaaccggacttaacagagagatca
agtcttcaagccctgctcatggcctctgttctggtcgggcagcagcccacctccttgttg
cctctgtcagtgctgggtcacctgaaccagatcagcttggaggttccgattcaccactcc
caacagatccccggcactctggaggggctcagcctcgataagacctctggcctcctcgat
ccgacctcaggcctcttagacataacccacggccttcttcctcttaccaccggagcggag
aatcctatccaagctctgcagtctctgctccttcctgccgctcttcctccaccccctgca
gccttcctgcccctcagccccgctctgctcacagctgccctgagctctgctgagctccac
tctcctcccaacactcagttagctcctgcacagcaaacccaacatgcccagcctcaggta
cccactgatacagctgttgacaccctcatcccagtctctctccaaggcaaagataattct
ctcctccaacaattacttcccactttgcttaacccgtctatgttgggagacgttcccggc
atcaccgggctccagaacatggtcggcctcggagcgggttccattcttctgtccccagtt
caagcttctgctttgggtttgctgcagagccctgatggaggaatcaacttactcaataac
atccagctgaaccttgcgcctccctcagatggggagaaacccggctctttgcaggaaacc
caaagaccagcctcacacgaaggtttaccggccagcgaaattgctcctgaagtatctcca
tgtgctgtttcggctctgggtcctcctcctgctcaagaatcccctccgcccgctcagagg
gggtcggagggcaggtccgtcattgacccttacacctctttcatggacaccatttatacc
tcttttcttcaagtgagtgctaaagagcaggaagacggggctcaactggggccgtcagac
cctacttcacccttctgtgccttaccgccggtttctttccccctggagcaccagagctca
tccactaatgcccccactctgccccaggcgagcgccccctgtctccctgagcccacggcg
agcttgctcgctccgcaacccggacttatcacgactcagcctggaagctgccgctcattc
tccggcccaggggacgcccaagccaacagaggacgggcctacgtccccgctacagaggaa
gccagtcatagagggacacacccacctggagccacctttgcaccccatatacttggagga
ggctaa
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