Xiphophorus hellerii (green swordtail): 116725342
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Entry
116725342 CDS
T07363
Symbol
tdrd5
Name
(RefSeq) LOW QUALITY PROTEIN: tudor domain-containing protein 5
KO
K18407
tudor domain-containing protein 5
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xhe03036
]
116725342 (tdrd5)
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Gene silencing
piRNA pathway
116725342 (tdrd5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OST-HTH
TUDOR
Motif
Other DBs
NCBI-GeneID:
116725342
NCBI-ProteinID:
XP_032427202
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Position
9:complement(5374913..5390403)
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AA seq
923 aa
AA seq
DB search
MNPTRXTQADDMSQEELLAKLKKDVRSLLTSSKLGLDPDQLRRDYVAMLGHPMPLKVLGF
RNVMDMIQEMPDVVSVNFREDGSLYLKAVSDENTQNIEFLVANQRISKSEKIKKFSSSRY
CPRPPFSSLPRRGRPPLALPANLRAQLRILLSQGPLRLSELEACYLRFYGFPLRIHNYGF
YSTGEMLEAAKDMIGIQQGRLGSVLSLKTEAGNYERSQNVMRPFMIPRPPVRPFSTPSRT
GPIKPPSVSSHRPICNNSDIKGPTTTKSPVLVNQSPLTPPETTLEPDHDMSPGSHSPELL
ESNPDSEQAPCEDGGLFHQNVLKLEEELQHQILENSVAGTVSQELKDKLRKVVGESNAGI
SIHDLPAEYKRLFGEDLPYLQWGFLSVTELVGALGDIFYLRSAEDNSGNSYIVVDLRDRD
NMEPGSGEIDGNTDIPGKSYYFTLEESLWENGSENVTSDNGNNELEFCSQSNIKEMVRPH
KEKQXGSVVMKTPEMYPAMQVHSRSPVPLDAMQNQRLNPPTRHQARELVEVLVEQVESPG
SFYIRFSETEEARALESLMFDMRRCYTCPEVSERYQLLEPFVRQGQVCCVSPNAIWFYRV
VIHKVLNSTHVEVFYVDFGDVTLVPIASLKFLKSSFSVLPAQAVPSILAGIKPASDTWTA
ESTASFRRLCSDQTLVGALDCYTGEVLQLFLCDTHTDQDIYIHTALINQGHGIACDPATA
TILCPKVTPVSLYMGKGMVELPEIDEELILSFKSGDSSGQSKEYSVKVVDDVDDEMPSLE
LIEESEFIPHIQVTELNPCSGVLMDQTVPCSDQGAAFTDESTLQTSAPLAPPDLIQTRNT
AASLCQTKTNEVAITSPPTTPSSDSSSCSAQEELNQPAKVLTSPFTELSSILKRLNQGCT
IGSQVSPLLVRNSGIPFPVFGAR
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgaatccgactaggtagactcaagcagacgacatgagccaagaggaacttttagcaaaa
ctgaagaaggatgttcgatcccttctcacttcaagtaaactgggtttggaccctgaccaa
ctcagacgagactatgtcgccatgttgggacatccgatgcccctgaaagtcctgggtttc
aggaatgttatggatatgattcaggagatgccagatgtcgtttctgtgaacttcagggaa
gatggaagtttatatttaaaggctgtgagtgacgagaacacccaaaacatcgagtttcta
gtggccaaccagcggatatcaaagtctgagaagatcaagaagttttcttcttctcgttac
tgtcctcggcctccattttcatcgctcccaagaagaggtcgtcctcctctagccctccct
gccaacctgagggcacagctccgcatcctgctctcccagggtccacttagactgtccgag
ctagaggcctgctatctgcgcttctatggcttcccgctccgtatccataactacggtttc
tactccaccggagagatgctggaggcagcaaaagacatgataggaatccagcaagggagg
ctgggctcagttctctctctgaaaactgaggcagggaattatgaacggtctcaaaatgtc
atgagaccgttcatgattcccaggccacccgtgagaccgttcagcacaccaagtagaacc
ggaccgataaagccgccatcggtttcctctcacaggccaatttgcaataattctgatatc
aaaggtcctacgacaacaaaatctccagttttagtgaatcagagtcctttgacgccacct
gaaacgactttggagcctgaccatgacatgtcgcctgggagtcactcaccggagctgctg
gagagcaaccctgactctgaacaagcaccttgtgaagatggtggcctgtttcatcaaaat
gtacttaagcttgaggaggagctccaacatcagatcttggagaacagtgttgctggtact
gttagtcaagagctgaaggacaagctgcgaaaggttgttggtgagtcgaatgctggaata
tcaattcacgatcttcctgccgagtacaagagactttttggagaagacttgccatattta
cagtggggctttctcagtgtaactgagcttgttggtgccctgggtgacattttctactta
agatcagcagaggacaacagtggaaacagctacatagtggtagacttaagggatcgtgac
aacatggaaccaggttcaggggaaattgatggaaatactgacataccaggcaagagctat
tacttcaccttagaagaatctctgtgggaaaacggaagcgagaacgtcacatccgataac
gggaataatgagttggagttttgtagtcaatccaacattaaagaaatggtaagaccacac
aaagaaaaacaataaggatctgtcgtcatgaagacgcctgagatgtacccggccatgcag
gtgcatagcaggtcgcccgtgccgctggacgccatgcaaaatcagcgtctcaacccgccg
acccgccaccaggctcgagagttggtggaagtcttggtggagcaggtggagtcaccagga
tctttctacatccggttcagtgagacggaggaagcgcgcgctttggagagcctaatgttt
gacatgagacgttgttacacctgtcctgaggtgtcggagcggtaccagcttctggagcca
tttgttaggcagggtcaggtctgctgtgtgtcgcccaatgcaatatggttctaccgagtc
gtgatccacaaagttctaaactccactcatgttgaggtgttttacgtcgacttcggtgat
gtaacgttggtcccgatcgccagcctgaagttcctcaagtccagtttttctgttcttcca
gcacaagcagttccttcaatacttgctggaatcaagccagcttcagatacctggactgca
gaatccacagcttcctttcggaggctgtgctctgatcagaccctggtgggcgcgttggac
tgctacactggagaagtgctgcagctattcctgtgtgatacacacaccgatcaggacatc
tacatacacacagcccttatcaaccaaggccatggcatcgcctgcgatcctgcaactgct
acaatattgtgtcccaaggtcacaccagtgagtctgtacatgggaaaaggaatggttgag
ctgccagagattgatgaggagctgattttgtcttttaaatcaggagacagttctggacag
tccaaggagtactctgtgaaggtagttgatgatgttgatgatgagatgccgtctctggaa
ctgattgaggagagtgaattcatccctcatattcaggttacagagctgaacccatgcagc
ggcgtcctaatggatcaaacggtgccctgcagtgatcaaggcgcggcgtttactgatgaa
tcaacgttacaaacatctgctcctctggcacctccagacctgatccagaccaggaatacc
gccgcctctctctgccaaactaaaactaatgaagttgccatcacttctccacccactacg
cccagctctgactccagctcctgctctgctcaagaggagctgaatcaaccagcgaaggtc
ttgaccagcccgtttactgaactgtcttcgattttgaagagactgaaccagggctgcact
ataggctcacaagtgtctccgctccttgtgcgaaactctggcatcccgtttcccgtcttc
ggggccaggtag
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