KEGG   Xiphophorus hellerii (green swordtail): 116725370
Entry
116725370         CDS       T07363                                 
Name
(RefSeq) tubulin alpha-1B chain-like
  KO
K07374  tubulin alpha
Organism
xhe  Xiphophorus hellerii (green swordtail)
Pathway
xhe04145  Phagosome
xhe04210  Apoptosis
xhe04517  IgSF CAM signaling
xhe04530  Tight junction
xhe04540  Gap junction
xhe04814  Motor proteins
xhe05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    116725370
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    116725370
  09143 Cell growth and death
   04210 Apoptosis
    116725370
  09144 Cellular community - eukaryotes
   04530 Tight junction
    116725370
   04540 Gap junction
    116725370
  09142 Cell motility
   04814 Motor proteins
    116725370
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    116725370
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xhe03019]
    116725370
   03036 Chromosome and associated proteins [BR:xhe03036]
    116725370
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:xhe04812]
    116725370
   04147 Exosome [BR:xhe04147]
    116725370
Messenger RNA biogenesis [BR:xhe03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     116725370
Chromosome and associated proteins [BR:xhe03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     116725370
Cytoskeleton proteins [BR:xhe04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    116725370
Exosome [BR:xhe04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   116725370
  Exosomal proteins of other body fluids (saliva and urine)
   116725370
  Exosomal proteins of colorectal cancer cells
   116725370
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 116725370
NCBI-ProteinID: XP_032427247
LinkDB
Position
9:complement(5543953..5546800)
AA seq 451 aa
MRECISIHIGQAGVQIGNACWELYCLEHGIQPDGLMPSDKTAGRGDDSFNTFFSETGSGK
HVPRAVYVDLEPTVIDEVRTGTYHQLFHPEQLISGKEDAANNYARGHYTIGKEIIDPVLD
RIRKLADQCNGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSVYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICCRNLDIERPTYTNLNRLMSQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLTVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIANIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDMAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGTDSIEGEGEEEGGEY
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgcgtgagtgtatttccatccatattggtcaggctggggtccagattggcaatgcctgc
tgggagctgtattgcctggaacatggcatccagccagacggtctgatgccgagtgacaag
accgcaggaagaggagacgactccttcaacactttcttcagtgagaccggttctggaaag
catgttccccgggccgtgtatgtggacctggagcccactgtcattgatgaggtacgcact
gggacctaccaccagctatttcaccctgaacagctgattagtggtaaggaggatgctgcc
aacaattacgctcgtgggcactacaccatcggaaaggagatcatcgatcctgttttggat
aggattcgcaaactggctgaccagtgtaatggtcttcagggcttcctggttttccacagc
tttggtggaggcactggctctggtttcacctccctgctgatggagcgcctgtctgtcgac
tatggcaagaaatccaagctggagttctctgtctacccggccccgcaggtgtccacagcc
gtggtggagccttacaactccatcctgaccacccacaccaccctggagcactcggactgc
gccttcatggtggacaacgaggccatatacgatatctgctgtcggaacctggacatcgag
cgccccacctacaccaacctgaacagactgatgagtcagatcgtgtcctccatcacggct
tctcttcgttttgacggcgcgctcaacgtggatctgactgagttccagaccaacttggtg
ccttatccacgtatccacttccctctggtcacctatgcccccgtcatctctgccgagaag
gcttaccacgagcagctgaccgtagctgaaatcaccaacgcttgctttgagccagccaat
cagatggtgaaatgtgaccctcgccacggcaagtacatggcctgctgccttttgtaccgt
ggagatgtggtgcccaaagacgtcaacgctgccattgccaacatcaaaaccaagcgcacc
atccagtttgtggactggtgccccactggtttcaaggtgggcatcaactaccagcctccc
actgtggttcctggtggagacatggccaaggtccagagggctgtgtgcatgttgagcaac
accacggccattgcagaggcctgggctcggctcgaccacaagtttgatctgatgtacgcc
aagcgtgccttcgttcattggtatgtgggtgagggcatggaggagggagagttctccgag
gccagggaggacatggctgcactggagaaggattatgaagaggttggaactgattctatt
gaaggggagggtgaggaagaaggaggggaatattaa

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