Xiphophorus hellerii (green swordtail): 116725370
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Entry
116725370 CDS
T07363
Name
(RefSeq) tubulin alpha-1B chain-like
KO
K07374
tubulin alpha
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04145
Phagosome
xhe04210
Apoptosis
xhe04517
IgSF CAM signaling
xhe04530
Tight junction
xhe04540
Gap junction
xhe04814
Motor proteins
xhe05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
116725370
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
116725370
09143 Cell growth and death
04210 Apoptosis
116725370
09144 Cellular community - eukaryotes
04530 Tight junction
116725370
04540 Gap junction
116725370
09142 Cell motility
04814 Motor proteins
116725370
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
116725370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xhe03019
]
116725370
03036 Chromosome and associated proteins [BR:
xhe03036
]
116725370
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xhe04812
]
116725370
04147 Exosome [BR:
xhe04147
]
116725370
Messenger RNA biogenesis [BR:
xhe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116725370
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
116725370
Cytoskeleton proteins [BR:
xhe04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
116725370
Exosome [BR:
xhe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116725370
Exosomal proteins of other body fluids (saliva and urine)
116725370
Exosomal proteins of colorectal cancer cells
116725370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
116725370
NCBI-ProteinID:
XP_032427247
LinkDB
All DBs
Position
9:complement(5543953..5546800)
Genome browser
AA seq
451 aa
AA seq
DB search
MRECISIHIGQAGVQIGNACWELYCLEHGIQPDGLMPSDKTAGRGDDSFNTFFSETGSGK
HVPRAVYVDLEPTVIDEVRTGTYHQLFHPEQLISGKEDAANNYARGHYTIGKEIIDPVLD
RIRKLADQCNGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSVYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICCRNLDIERPTYTNLNRLMSQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLTVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIANIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDMAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGTDSIEGEGEEEGGEY
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgtatttccatccatattggtcaggctggggtccagattggcaatgcctgc
tgggagctgtattgcctggaacatggcatccagccagacggtctgatgccgagtgacaag
accgcaggaagaggagacgactccttcaacactttcttcagtgagaccggttctggaaag
catgttccccgggccgtgtatgtggacctggagcccactgtcattgatgaggtacgcact
gggacctaccaccagctatttcaccctgaacagctgattagtggtaaggaggatgctgcc
aacaattacgctcgtgggcactacaccatcggaaaggagatcatcgatcctgttttggat
aggattcgcaaactggctgaccagtgtaatggtcttcagggcttcctggttttccacagc
tttggtggaggcactggctctggtttcacctccctgctgatggagcgcctgtctgtcgac
tatggcaagaaatccaagctggagttctctgtctacccggccccgcaggtgtccacagcc
gtggtggagccttacaactccatcctgaccacccacaccaccctggagcactcggactgc
gccttcatggtggacaacgaggccatatacgatatctgctgtcggaacctggacatcgag
cgccccacctacaccaacctgaacagactgatgagtcagatcgtgtcctccatcacggct
tctcttcgttttgacggcgcgctcaacgtggatctgactgagttccagaccaacttggtg
ccttatccacgtatccacttccctctggtcacctatgcccccgtcatctctgccgagaag
gcttaccacgagcagctgaccgtagctgaaatcaccaacgcttgctttgagccagccaat
cagatggtgaaatgtgaccctcgccacggcaagtacatggcctgctgccttttgtaccgt
ggagatgtggtgcccaaagacgtcaacgctgccattgccaacatcaaaaccaagcgcacc
atccagtttgtggactggtgccccactggtttcaaggtgggcatcaactaccagcctccc
actgtggttcctggtggagacatggccaaggtccagagggctgtgtgcatgttgagcaac
accacggccattgcagaggcctgggctcggctcgaccacaagtttgatctgatgtacgcc
aagcgtgccttcgttcattggtatgtgggtgagggcatggaggagggagagttctccgag
gccagggaggacatggctgcactggagaaggattatgaagaggttggaactgattctatt
gaaggggagggtgaggaagaaggaggggaatattaa
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