Xiphophorus hellerii (green swordtail): 116725382
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Entry
116725382 CDS
T07363
Symbol
ybx1
Name
(RefSeq) Y-box-binding protein 1 isoform X1
KO
K09276
Y-box-binding protein 1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116725382 (ybx1)
03019 Messenger RNA biogenesis [BR:
xhe03019
]
116725382 (ybx1)
03041 Spliceosome [BR:
xhe03041
]
116725382 (ybx1)
Transcription factors [BR:
xhe03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
116725382 (ybx1)
Messenger RNA biogenesis [BR:
xhe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
116725382 (ybx1)
mRNA cycle factors
Common to processing body (P body) and stress granule
116725382 (ybx1)
Spliceosome [BR:
xhe03041
]
Common components
Common spliceosomal components
General mRNP proteins
116725382 (ybx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSD
OB_RNB
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
116725382
NCBI-ProteinID:
XP_032427279
LinkDB
All DBs
Position
1:10832303..10837278
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AA seq
324 aa
AA seq
DB search
MSSEAETQQQPPQPAADAESPSSPAAAASAGDKKVIATKVLGTVKWFNVRNGYGFINRND
TKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVAVQGSKYA
ADRNRYRRYPRRRGPPRGGDYPENYQSDEGEPGSGGRDKSREGGENAPEGDSQQQQRRPG
YPGRRRYPPYFVRRRYGRRPPYTNAPRGEMTEGGEGDEGQGGPDQGNKPVRQNYYRGFRP
RFRPRGPPRPRPVRDSEEDKENQGGEGGQNQQPRQRRYRRNYNYRRRRQQTGGKPGQENK
EAKTGGDPSAEKTSAPEAQQGGAE
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgaggccgagacacaacaacaacctccgcagcctgctgcggatgcggagagc
ccatccagtccggcagccgcagcttcagcgggggataagaaggtcatcgcaacaaaagtc
ttgggtaccgtcaaatggttcaacgtcaggaatggatatggtttcatcaataggaatgat
acaaaggaggatgtctttgtacaccagacggccattaagaagaacaacccaaggaaatat
ctccgcagtgtgggagatggagaaactgtggaatttgacgtagttgagggagagaaggga
gcagaggcagctaacgtcactggcccaggaggtgtcgcagtccagggaagcaagtacgct
gcagaccggaatcgctatcggcgctatccacgaaggaggggccctccccgcggcggagac
tacccagagaactaccagagcgacgaaggcgagcccggcagcggaggacgcgacaagagc
agagaggggggagagaacgcccccgaaggagactcgcagcaacagcagcgcagaccaggt
taccctggcagacggcgctacccgccatactttgtacgtagacgctacggccgtcggccc
ccgtacaccaacgcaccacgcggagagatgactgagggaggtgagggtgacgaaggccag
ggaggtccagaccagggcaacaaaccagtgaggcagaactactacagaggcttccgacca
aggttcagaccaaggggtcccccccgtcccagaccagtgcgggacagcgaggaagacaag
gagaatcagggcggcgaaggaggccagaatcaacagccccgccagcggcgctaccgtcgt
aactacaactaccgccgcagacgccaacagaccggtggcaaacccggccaggaaaacaaa
gaggccaagacaggaggtgacccatctgcagagaaaacgtccgctcccgaggcccagcag
ggtggggctgagtag
DBGET
integrated database retrieval system
