Xiphophorus hellerii (green swordtail): 116725396
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Entry
116725396 CDS
T07363
Symbol
tubgcp5
Name
(RefSeq) gamma-tubulin complex component 5 isoform X1
KO
K16572
gamma-tubulin complex component 5
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xhe03036
]
116725396 (tubgcp5)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xhe04812
]
116725396 (tubgcp5)
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
gamma-tubulin ring complex
116725396 (tubgcp5)
Cytoskeleton proteins [BR:
xhe04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
116725396 (tubgcp5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCP_C_terminal
GCP_N_terminal
GCP5-Mod21_C
GCP5-Mod21_N
GD_AH_second
Motif
Other DBs
NCBI-GeneID:
116725396
NCBI-ProteinID:
XP_032427309
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All DBs
Position
9:24047303..24061733
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AA seq
1014 aa
AA seq
DB search
MAHWSTFEKETERETKRLVRCLSGVQDEEDQNFQLALKFAWSNFKFHRYLDADSHKIQRT
INGIYEKLMVHSDLSKAGSWRRLTEEFLTSPLPNTNGTKTDTHYGILSLLLFLSDSPSNT
NFTERPRVKDAEPKDEFDWAKYLMEGEDVDAGPFPDTPEWSEDESEDDDRQQPISREDSG
IQLDRTPQEDQDTTSKMVPVAWTVGEPDARTWLEQHVVTPYWVAHAPRFSHSLHLHSNLL
NVWDQHLYNTDPLYLPEEKAFVTETQVVRETLWLLSGVKKHFIFQHHDGKVSVRNNVVVT
HLTSNCLHSVLEHVAVYGQAVFRLQRFIDEVTGHSSEPGPPGPASSHSYRKGSEPPFRTY
QAFVWALNKYSASFKEELTAIEREVISNDETVTLSGVLERLSPHLAQIKVLHKVFCTGVA
EVPPATPNVVRASHLLNTLYKAIIEYDSVGDASEQAVALLFSLWTETVRPYLEIVDEWIV
HGHLFDPAKEFIIQRNKDVPVNHRDFWYATYTLYSVSEMVDSEEKLNDAASGSSGGDPGS
SNRQLTMVSFLKPVLKQIIMAGKSMQLLKNLHCKEAQDSERSSRDAERKSLYTVFLESVQ
SRLSSPEESPIDKMTEQQATTRSIIKMQSIMAQHLEIEDVHDPLLAINFARLYLEQSDFH
ERFSGGDFIVDRSSQSVTCQTFELTLRSCLYPHIERRYIECCGNLMKTLKKDYKLLEYLQ
AMRNYFLLEAGDTMYDFYTAIFDKVQEKESWQQPSFLNMLLQEAVGQRYPEDSSRLSVFL
EPLDASRKKHPVNNLEVLTLSYKVPWPVDIVISSECQKIYNQVFLLLLQIKWAKYSLDTL
RFSDFAEVTKKLEGSPAEEAKLKEPISQQIHRMCLLRVKLMHFVNSLHNYIMTRILHSTG
LEFQHQVQEAKDLDQLIKIHYRYLATIHDRCLLREKVSFVKEAIMKVLNLVLIFSDRWQA
GFGAWKIESIDKMESDFKNCHMFLVTILNKAVCRGSFPHLESLALSLMAGFEQC
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atggcacactggagcaccttcgagaaggagacggagagagagacgaagaggctggtcagg
tgtctcagcggagtgcaagacgaggaggaccagaacttccaactggcgctgaagttcgct
tggtcaaacttcaagtttcatcggtatttggatgccgacagtcataaaattcaacgcaca
atcaatggaatctatgaaaagctgatggtccactctgacctgagtaaggcgggcagctgg
aggagactgaccgaggagttcctgacctcaccactccccaacaccaacggaacgaagaca
gacacacactacgggatcctgtcactgctgcttttcttatcagattctccctcaaacaca
aacttcactgagagacccagggtgaaagatgctgaaccgaaagacgagttcgactgggcc
aagtacctcatggaaggggaggacgtggacgccgggccgttcccggacacgccggagtgg
tcggaggacgaaagcgaggacgacgaccggcagcagccaatcagcagggaggactctggg
atccagttggacagaaccccccaggaggaccaggacaccaccagcaagatggtgccagtc
gcgtggacggtgggggaaccagacgcccggacctggcttgaacagcatgtggtgactccg
tactgggtcgctcacgctcctcgcttctcccacagcttgcatttacactccaacctgctc
aacgtttgggaccagcacttgtataacacagatcctctgtatctgccggaagaaaaagcc
ttcgtcaccgagactcaggtcgtacgggaaaccttatggcttctctccggggtgaagaaa
cactttatattccagcatcatgacggcaaagtgtcggtgaggaataacgtggtggtaacc
catctgacaagtaactgcctgcactctgtgctggagcacgtcgccgtgtacggacaggcg
gtgttcaggctgcagaggttcatcgacgaggtgacgggccacagctcagagcccggcccg
ccgggcccggcctcctcccacagctacaggaagggctcggagccgcctttcaggacctac
caggcttttgtttgggctctcaacaaatactccgccagcttcaaagaagagctgaccgca
atcgagcgagaggtcatcagcaacgatgagacggtgaccctgtccggcgttctagagcgt
ctcagccctcacctggcccagatcaaagtgttgcacaaagtcttttgcacgggagtcgct
gaagttcccccggcaaccccaaatgttgtgcgggcctctcacttgctcaatactctctac
aaggctattatagaatatgacagtgttggagatgcatcagagcaagcggtggctctgctc
ttttctctgtggactgagacggtcaggccatatttggagattgtggatgagtggattgtt
cacggccatctgttcgaccctgccaaagagttcatcatccaaagaaataaggacgtccca
gtaaaccacagggacttctggtacgccacctacaccctgtacagcgtctccgagatggtg
gacagcgaggaaaagctgaacgacgcagccagcgggagctccggtggggatccgggctcc
agcaacaggcagctcaccatggtgtccttcctcaaaccagtgctgaagcagatcatcatg
gccgggaagtccatgcagttgctcaaaaatctgcactgtaaagaagcccaggattccgag
agatcctccagagatgcagagaggaagagtttgtacacggtgtttctggagtctgtgcag
tcccgcctgagcagcccagaggaatccccgatcgacaagatgaccgagcagcaggccacg
accaggagcatcataaagatgcagtccatcatggcgcagcacctggagatcgaggacgtc
cacgatccactcttagccatcaacttcgccagactctacttggagcagagcgacttccac
gagcgcttctctggcggcgacttcatcgtggaccgctcgtctcagtcggtcacctgccag
accttcgagctcaccctgcgctcctgcctctacccccacatcgagaggcgttacatcgag
tgctgcggcaacctcatgaagactctgaagaaagactacaagttgctggaatacctccaa
gccatgaggaactacttcctgctggaagccggagacaccatgtatgacttctacaccgcc
atctttgacaaggtgcaggagaaggagagctggcagcagccttcttttctcaacatgctg
ctgcaggaggcagtgggacagcgctacccggaggacagcagcaggttgtcggtctttctg
gagcctctggacgcgtccaggaaaaagcacccagtgaataatttagaggtcctgaccctg
agttacaaggtcccctggcccgtagatattgtgatcagctctgagtgccagaagatttac
aatcaagtgttccttctcctgctgcagattaaatgggctaaatacagcctggacacgctt
cgattcagtgattttgcagaagtcacaaagaaactggaaggatctcctgctgaggaagca
aagctgaaagaaccaataagccagcagattcacagaatgtgtctgctgcgcgttaaactg
atgcacttcgtcaacagcctccacaactacatcatgaccagaattctgcacagcactggt
ctggagtttcagcaccaagtacaggaagcaaaagacctggaccagctgatcaagatccac
tacagatacttggcgaccatccatgaccgctgtctgctgagggaaaaggtcagttttgtg
aaagaggcgataatgaaggttctcaatctggtcctcatcttctcagaccgatggcaagct
ggatttggcgcttggaagatcgagtctatagataagatggagtctgatttcaaaaactgc
cacatgttcctggtgactatacttaataaagccgtctgccggggctcctttcctcacctg
gagtctctggccctctcgctgatggcagggtttgagcagtgctga
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