Xiphophorus hellerii (green swordtail): 116725412
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Entry
116725412 CDS
T07363
Name
(RefSeq) procollagen galactosyltransferase 2-like
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe00310
Lysine degradation
xhe00514
Other types of O-glycan biosynthesis
xhe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
116725412
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
116725412
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
xhe01003
]
116725412
Enzymes [BR:
xhe01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
116725412
Glycosyltransferases [BR:
xhe01003
]
O-Glycan biosynthesis
O-linked Gal type
116725412
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
116725412
NCBI-ProteinID:
XP_032427335
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All DBs
Position
9:complement(17639152..17672099)
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AA seq
638 aa
AA seq
DB search
MDLLAAFLSEGLRLDSQLNPGVKMRVVGAAGVAELWAVLAALVAGAASELVTLVQEQVKP
ESPVLPPKVMIAILARNAAHSLQHYLGCIERLEYPRERIAIWAATDHNIDNTTAMLREWL
KRAQRVYHYVEWRPMEEPSSYTDEWGPKHWPPSRFNHLMKLRQAALKAARERWADYILFA
DSDNLLTNPRVLDLLMAENLTLVAPMMESRSLYSNFWCGVTPQGYYKRTQDYQPIREWKR
LGCFPVPMVHSTFLLDLRRESSRDLAFYPPHPDYSWAFDDIMVFAFSARQSGVQMYVCNR
EHYGFLPVPLKAQQNVEDEAESFIHTISEALIEHDMEPSQYIYAPPLPPDPMGFDDIFLI
NLKRRLDRRTRMLKTMGAMGLRPTLIDAVDGKALNTSQLQALGIEMLPGYKDPYSGRVLT
RGEIGCFLSHHSIWKQVVDRGLQKVLALEDDVRFEPRFKRRLQAIMEDIDRAQLDWDLIY
VGRKRMQVQQPEHSVEGVNNLVEADYSYWTLAYALSQQGARKLLGVQPFTKMLPVDEFLP
IMFNKHPNVQYMSHFEPRDLKAFSVEPLLLYPTHYTGEPGYISDTETSTIWDDEAVATDW
DRQHARKTAQQGRIRPVAQNSVTGDSPPPAARASRDEL
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggaccttttggcagctttcctatctgaaggactccggcttgactcacagctgaatcct
ggggtaaagatgcgggtggtcggagccgcgggtgtcgctgagctgtgggccgtgctggcc
gccctggtggccggcgccgcgtccgaactggtgacgctggtgcaggagcaggtgaagccc
gagtcgccggtgctgccgccgaaggttatgatcgcgatcctggctcggaacgcggcgcac
agcctgcagcactacctgggctgcatcgagcggctggagtacccgagggagcgcatagcg
atctgggcagcgacagaccataacatagacaacaccactgccatgttgagagaatggctg
aagagagcgcagcgcgtttatcactatgtggagtggagaccaatggaggagcccagctcc
tacacagatgagtggggtccgaagcactggcccccttccagattcaaccatctaatgaag
ctgcggcaggcggccctgaaggctgcgcgggagcgatgggccgactacatactgttcgcc
gacagcgacaacctgttgaccaacccccgagtgctggacctgctgatggccgagaacctg
acgctggtcgctcccatgatggagtctcgctctctctactccaacttctggtgcggcgtc
accccacagggttactacaagcgcacccaggactaccagccaatcagggagtggaagagg
ctcggctgtttccctgttcccatggtgcacagcaccttccttttggaccttcggcgcgaa
tccagccgagacctggcgttctacccacctcacccggactacagctgggcctttgatgat
atcatggtgtttgccttctcggcacgtcaatcaggggtgcagatgtacgtgtgcaatagg
gaacactacggcttcctgcccgtcccgctcaaagctcaacaaaatgtggaagacgaagct
gagagtttcatacacaccatctcagaagctctgattgaacacgacatggagccgtctcag
tacatctacgccccgccgttacctccagacccaatgggcttcgatgatattttcctgatt
aacttgaaacgccgtctggacagaagaaccaggatgttgaaaacaatgggcgccatgggc
cttcgccccactctgattgatgcagtggacgggaaagctctaaatacatcccagctgcag
gcactgggaattgagatgttgccaggctacaaggatccatattctggtcgtgtcctcacc
agaggggagattggctgcttcctgagtcaccactctatatggaaacaggtggttgatcgt
ggcctgcagaaggttctggctctggaggacgatgtgaggtttgaacccaggtttaaacga
aggcttcaggccatcatggaggacatagacagagcccagctggactgggacctcatctac
gtgggaagaaagcgaatgcaggtgcagcagccggagcattcagtggaaggtgtgaacaac
ctggtggaagccgactattcctactggaccctggcctacgctctttcacagcaaggggcc
cgaaagttgctgggggtgcaacctttcaccaagatgctccctgtcgacgaatttcttccc
atcatgttcaacaaacaccccaatgttcagtacatgtcccatttcgagccacgggacctg
aaggccttctccgtggagccgctgctgctctatcccacccactacaccggcgagccgggc
tacatcagcgacaccgagacttccaccatctgggacgacgaggccgtcgccacagactgg
gaccggcagcacgcccgcaagacggcccagcagggccgcatccgacccgtagcgcagaac
agcgtcactggagactcgccgcctcctgctgcccgagcctcgcgcgacgagctctga
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