Xiphophorus hellerii (green swordtail): 116725457
Help
Entry
116725457 CDS
T07363
Symbol
rubcn
Name
(RefSeq) run domain Beclin-1-interacting and cysteine-rich domain-containing protein isoform X1
KO
K19330
run domain Beclin-1 interacting and cysteine-rich containing protein
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116725457 (rubcn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116725457 (rubcn)
Membrane trafficking [BR:
xhe04131
]
Autophagy
Other autophagy associated proteins
Others
116725457 (rubcn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUBC_PIKBD
RUN
LRRFIP
CMD
Motif
Other DBs
NCBI-GeneID:
116725457
NCBI-ProteinID:
XP_032427417
LinkDB
All DBs
Position
9:complement(11153411..11177854)
Genome browser
AA seq
981 aa
AA seq
DB search
MEVTAEGEAEERRREQWKLLSSLKTTVEGLVSTNNPNVWSRYGGLQRLHKDMNNILGHRL
KNEQMYYKQRDYWPFVWCVRYISPHLAMHVEQFSHLEPVLSSGVHRAGESHKAERWLLHS
LQVHKLSAQLKPLLRHLGNTRKYYNDDAFLLSEPHVTAMFQCLEAVEQNNPKLLAQVDTV
GLSPLKGSPCLSLLKSQSLCVLPGAGGTWRNADTAPGGDSLNRRLTTSNCSLREAVTANH
RPANTTAARSVKGNNMSEESINTKYTTSPASTVETPWVIVSRPGDRERGVTPSPGSISVP
HISLSESPSSSVQPEAGDSCDGDSDDGPEYLAIGNLGQRSRDSRSSIHSSEQDQTKEPGT
QQSSQTSTPPRCSSFSEGQRGPGRGAKGHTRSFSDTGISQKLRNGGGHRKITIIIEDPVA
ESASEDSSMKDYSPFSPQRSNTSTPSSLYMESYGPQYSSVPDGMFRKPSKGQSLISYLSE
QDFGSCADLEKENAHFSISESLIAAIELMKYNMLRQEEEGEEEGDSDSEIQQLKQKIRLR
RQQIRRSRLPPYTTSQHHFHSTDSGGSRRSSQDSYQGLSDSGSAEEVEECELQDGCEGQS
LLAVSQSGLSLSLASLFSDADIKRSVSSSGRSFLSSESISPSFLQSNSAESVAMGLLRQF
EGMQLPAASELDWLVPEHDAPQKLLPIPDSLPISPDDGEHADIYKLRIRVRGNLEWAPPR
PQIIFNIHPAPKRKIIVAKQNYRCAGCGTRIDPDYIKRLRYCEYLGRYFCQCCHENAQAI
VPGRVLRKWDFSKYYVSNFARDLLSKISGDPLFNPSDINNGLYKKIKSLESVRVLRVQLF
HMKNLFKTCRFARGVLDQLDSVPGHLTEDLHLFSLNDLTAVRNGELAPRLKELLKLGTMH
VAGCVLCQAKGFVCEFCNNDKDIIFPFQLSKCQRCEECHACYHQSCFRTGKDCPRCRRLA
ERRERMARRNMEEQEDEGGGT
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atggaggttacggcggagggagaggcggaggagcgcaggagggagcaatggaagctgctg
tccagcctgaagaccacggtggagggcctcgtgtccaccaacaaccccaacgtctggtcg
cggtacggcggcctgcagaggctgcacaaggacatgaacaacatcctcggtcacagactg
aagaacgagcagatgtactacaaacagcgagactactggccctttgtttggtgtgttcgc
tacatcagcccccacctcgccatgcacgttgaacagttcagtcacctggagccggttctg
agcagcggggtgcacagagccggtgagagccacaaggccgagcgctggttgctgcacagc
ttgcaggttcataagctgtcagctcagctcaaacctctgctcaggcatttgggaaacaca
cggaaatattacaacgacgacgccttcctgctgagtgagcctcatgtgacggccatgttt
cagtgtctggaggctgtggagcagaataatcccaaactgctggcccaagtagacactgtt
gggctttccccgctgaaaggctctccgtgtcttagtctgctgaagagccagagcctgtgt
gtgctgccaggggccggggggacctggaggaacgccgacacggcccctggaggagactct
ctgaaccgcagactaaccacctcaaactgctccctgcgagaagcggtcacagccaaccac
aggccagcaaacactacagcagctagatccgttaagggcaacaacatgagtgaggaaagc
atcaataccaagtacactacctctccagccagcaccgtggaaactccgtgggtgatcgtg
tccagaccgggggaccgtgagcgaggtgtgacgccgtctcctggatcaatttccgtccct
cacatctcgctgtcagagtccccatcctcctccgttcagcccgaggccggggactcctgc
gacggtgactccgacgatggaccggagtatctggctattggtaacctggggcaacgaagt
cgtgattctcgaagctccatccacagcagtgagcaggaccagacaaaggaacctggcaca
cagcagagttcccagacctcgaccccgccgaggtgctcgtctttctcagagggccagagg
ggccccggcaggggggccaaaggacacacccgctcgttttcagacacggggatcagtcaa
aaactcaggaatggaggaggccacagaaaaatcaccataataatagaggatccagtagca
gaatcagcaagcgaagactccagcatgaaggactacagtcccttctctcctcagcgcagc
aataccagcacacccagctccctttacatggagtcctatgggccccagtacagcagtgtg
ccggatgggatgttcaggaagccatcgaaggggcagagcctcatcagctatctgtcagag
caggactttggcagctgtgctgacctagaaaaggaaaatgctcatttcagtatctcagag
tccctcatcgccgccattgagctgatgaaatacaacatgctgcgccaggaggaagagggt
gaggaggagggagacagcgactccgagattcagcagctcaaacaaaagatccgtctgagg
aggcagcagatccgccgcagccgtctgccaccctacacaacctcccagcaccatttccac
tccactgacagcggaggctccaggaggagctctcaggactcctaccagggcctgtctgac
tccggctcggccgaggaggtggaggagtgtgaactgcaagatggctgtgagggtcagtcc
ctgctggcggtgtctcagagcggcctctccttgtcactcgcctccctcttctcagatgcc
gatataaagcgcagtgtaagctccagtggcaggtccttcctgagctcagagtccatctct
ccctccttcctccagtctaactcagctgagtcggtggcgatgggtttgctcaggcagttc
gagggcatgcagcttcctgcagcttcagagctcgactggctggttccagagcacgatgct
ccacagaagctgctgcctattcccgactctctgcccatctctcctgatgacggagagcac
gcagatatctacaagttgaggattcgagttcgaggcaaccttgagtgggcgccgccgaga
ccacaaatcatcttcaacattcatcctgcaccaaagaggaagatcattgttgccaagcag
aactaccgctgtgctggatgtggcaccagaattgacccagactacatcaagcgactgcga
tactgcgagtacctcggccgctacttctgccagtgctgccacgagaacgcccaggcgatc
gttcccggccgagttctcagaaagtgggacttcagcaagtactatgtcagcaactttgcc
cgagacctgttgagcaagatttcaggagaccctctgttcaacccgagtgacatcaacaac
ggcttgtacaagaagatcaagtctctggagtccgtcagggttttaagagtgcagcttttt
cacatgaaaaatctcttcaagacttgtcgctttgccagaggggttcttgaccagttggac
agcgtgccaggtcacctgaccgaggaccttcaccttttctcgctcaacgacctcactgct
gttcgcaacggagaactggctcctcggttgaaagagctgcttaagcttggtaccatgcat
gtagctggttgcgtgttgtgtcaggcgaagggctttgtctgcgagttctgcaacaacgac
aaagacatcatcttccccttccagctcagcaagtgccagcgctgcgaagagtgccacgcc
tgttaccatcagagctgcttcaggacaggtaaagactgcccccggtgtaggcggctggcg
gagcgtcgggagaggatggcgcgcagaaacatggaggagcaagaggacgaaggaggaggg
acttag
DBGET
integrated database retrieval system
