Xiphophorus hellerii (green swordtail): 116725483
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Entry
116725483 CDS
T07363
Symbol
usp24
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 24 isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xhe01002
]
116725483 (usp24)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xhe04121
]
116725483 (usp24)
Enzymes [BR:
xhe01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
116725483 (usp24)
Peptidases and inhibitors [BR:
xhe01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
116725483 (usp24)
Ubiquitin system [BR:
xhe04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
116725483 (usp24)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
UCH
UCH_1
UCH_UBL1
UBA
DUF3517
UBA_RAD5A
UBA_7
Motif
Other DBs
NCBI-GeneID:
116725483
NCBI-ProteinID:
XP_032427452
LinkDB
All DBs
Position
9:21649404..21689499
Genome browser
AA seq
2627 aa
AA seq
DB search
METEEEQHITTLLCMGFPDPDVIRKALRLAKNDINEAVALLTNESPGLGYGYEPMESGPS
TGLGSSGDGENSGRTGTSGFDPPPAYHDVVDGERSNDENGNCSGGSMEFPTTNLYELESR
VFTDHWSIPYKREESLGKCLIASTCLARHGLADADENCKRFVERCMPEAFKKLLTSSAVH
KWGTEIHEGIYNMLMLLVELVAERVKQDPVPVNLMGVLTMALNPDNEYHFKNRMKSCQRN
WAEVFGDEANIFGVSPSNTYQKEPHGWLVDLVNRFGELGGFAAIQTKLSSEEIEIACVSA
LVQPLGVCAEYLNSSLVQPMLDPVIHKTITYVQNLEEKDLKDKRLVSIPDLLSAIKLLCM
RFQRELVAVVDDLRLDTLLRMLKTPHFSTKMNSLKEVTKLIEESTVSKTVKNAIDTDKLL
DWLVENSVLSIALEGNIDQAQYCERIKGIIELLGSKLSLDELTKIWRIQAGQSSTVIENI
HTIIAAAAVKFSFDQLTHLFVLIQKSWEVESDRVRQKLLSLIGRIGREARSETTTGKVLE
VLWELAHLPTLPTSLVQQALEEHLGILSDAYAVKETVKRSYIIKCIEDIKKHHTQEDNKG
SITQSSFHIGTWQKKKSNSLAKASQQSTPQTVWVVPALRQLHEITRSFIKQTYQKQDKSI
IQDLKKNFEIVKLITGSLVCCHRLAVSASGNNGLSASTLVDGRYTYQEYLDSHLRFLAFF
LQEASLYLVWNRAKELWECLVSGPDVCELDRELCFEWFTKGQHDLESDVQQQLFKEKILK
LEPYEITMNGFGLFKTFFENVNLCDHRLKRQGTQLCVERLDLAGMDFIWRIAMETPDEEI
ANEAIQLIITYSYTNLNPKMKKDSVSLHKKFIADCYKRLEAASSALGGPTLTHAVTKATK
MLTATAMPTVATSVQSPSRYRGGFGSTKLVIIERLLLLAERYVITIEDLYSFPRTILPHG
ASFNGHPVTLHITYESTKDTFTLETHSNETIGSIRWKISEHLSCPVDNVQIFANDSVLTM
NRDQKLLSQLGFSDEQSLTVKSSGTGTPSGSSESSASASSSSSSAVFNSAYALEQEKSLP
GVVMALVCNVFEMLYQLANLDEPRIILRVRKLLLLIPTDPEVQDALDNFVPKESSVWSHQ
KTLFTLGQGSGSRSPSVTPKQQHQPSAASILESLFRSSAPGMSTFRVLYNLEVLSSKLMP
TSDDEMAKTSSKSFCENFLKAGGLSLVVNVMQRDSIPSEVDYETRQGVNSICLQLARFLL
VGQSMPMALDDDVIRDGDALSSRPFRNAGRTGRQLSLCGTPEKSSYRQMSLSERSSIRVE
EIIPAARVAIQTMEVGDFTSTVACFMRLTWAAAAGRLDLVGSQQPIRETHSALLPQGVRT
RVSSTGSNCSSSSEGEATPTALHAGICVRQQSVSIKDAIIAREALSLLVTCLQLRCQQMS
SFYTLPSVSDFIIDILLGSPSAEIRRVACDQLYTLSQSDTSAFPEVQKPNLFLLSVILTA
QLPLWSPTSVMRGVNQRLLSQCTEYFDLRCQLLDDLTSSEMEVLKVSAANMLEDEISWLD
NFEPSWSSEMETSEADNILLAGHLRLIKTLLSLCGNEKEHLGPSLIQQLLDDFLFRASRI
IINSSNPTPSPAPSHDFHPKCSTASSRLAAYEVLVMLADSSLSNLRLITRELLSMHHQSD
PSLCKEFDHLPPVESRSVSGFVGLKNGGATCYMNAVFQQLYMQPGLPEAFLSIEDDTDQP
EESVFYQVQSLFGHLMESKLQYYVPENFWKIFKMWNKELYVREQQDAYEFFTSLVDQLDE
HLKKMGREQIFKNTFQGIYSDQKICKDCPHRYEREETFMALNLGVTSCQSLEISLDQFVR
GEVLEGSNAYYCEKCKEKRTTVKRTCIKSLPSVLCIHLMRFGFDWESGRSIKYDEQIRFP
WVLNMEPYTVSGMARQDCSGDGAEGRGDGSSGGSPRKKVTISENYELVGVVVHSGQAHAG
HYYSFIKDRRGNARGRWYKFNDNVVEEFDMNDETLEYECFGGEYRPKVYDQSNPYPDVRR
RYWNAYMLFYQKISDQNSPALPKKSRVSIMRQEAEDLSLSAPSSPDVSPQSSPRPLRANN
DRLTLLTRLVRKGEKKGLFVEKMPASIFQMVRDENLRFMRNRDVYNSDYFSFILSLASVN
ATKLKHQNYQPMAKESLQLAVHFLFHTYLHTKKKLRVDTEEWMAAVEVLLSKSSEACQWM
VQFLVGSEGREIIRVCLLECSVREVRTVVASVLEKTLESALHFGDPGLDSLTDALLSLLD
KDIPENVKNCAQYFNLFSNFTQRGCGPCQLLLKHSAYRRMLIFLLGPNRQNNQNRRWSPA
QAREFLHLHSSLALMTLHSDLSPQRTLAPGGSKLPASSVHSSGPLLPLHSDILASLFTPE
GQPYLLEVMFAMRELSGPLSLLIEMVTYCSYCNEGFSLGVLQLLKSQMETAPPHELKNVF
QMLQEILVVEDPLQSQRLKYAFESDKGLLALMHQSNNVDSRRCYQCVKFLVTLAQKCPPA
KDYFKDLSGHWSWAVQWLQKKMTEHYWTPQSNVSNETSTNKTFQRTISAQDTLAYATALL
NEKEQSGSSNGSDGSPANENAERSLRQGSESPMMLGDSKSDLEDVDS
NT seq
7884 nt
NT seq
+upstream
nt +downstream
nt
atggagaccgaagaggagcagcacataacgacgctcctctgcatgggtttcccagaccct
gacgtgatacggaaagcgctccggctggcaaagaatgacatcaacgaggcagtggcgctt
ctaacgaacgagagccccggactcggctatggatacgagccgatggagagtgggccttcc
accggcttgggctccagtggggacggggaaaacagcgggaggactgggactagtgggttc
gatccccctccagcataccacgacgtcgtggacggcgagcgaagcaacgacgagaacggg
aactgctcaggaggcagcatggagttccccaccaccaacctgtacgagctggagagccgg
gtcttcaccgatcactggtccataccctacaagagagaggagtccctgggcaagtgcctc
atcgcctccacctgccttgcacggcacggtctggcggacgccgatgagaactgcaagcgt
tttgtggagcggtgcatgccggaggccttcaaaaagctgttgaccagcagcgccgtacac
aagtggggcacggagatccacgaggggatctacaacatgctgatgctgctggtggagctg
gtggccgagagggtgaagcaggaccccgtccccgtcaacctgatgggggtcctgaccatg
gcccttaaccccgacaacgagtaccactttaagaaccgaatgaagtcatgtcagaggaac
tgggccgaagtttttggagacgaggccaacatatttggagtctctcccagcaacacctac
cagaaagagccccacggttggctggttgatttagtgaatcgatttggagagttgggagga
ttcgctgccatccagactaaactcagctcagaggagatcgagatcgcttgtgtatcagcc
ctggtccagccccttggtgtttgtgcagaatatttaaactccagcctcgtccagcccatg
ctcgatcccgtcatccacaagaccatcacatatgtgcagaacctggaggaaaaggacctg
aaggacaagcgtctggtgagcatccccgacctgctgtcggccatcaagctgctgtgcatg
aggttccagagggaactggtcgccgtggtggacgacctgcggctggacacgctgctgaga
atgctcaaaactccccacttctccaccaaaatgaactccttaaaagaagtgaccaaatta
atagaagaaagtacagtgtcaaaaacggtaaaaaacgccatcgatacagataaacttctc
gactggctcgtggagaactcggtcctgtcgatagcgctggaaggtaacattgatcaggct
cagtactgtgagaggataaagggaatcattgagctgctcgggagtaagctgtcactggac
gaactcaccaagatctggagaatacaggccggtcagtcctcaacggtgatagagaacatc
cacacaataattgctgctgctgcagtgaagttcagcttcgatcagctcacccacctcttt
gtcctcatacaaaagagctgggaggtggagagcgaccgcgttcggcaaaagctgcttagt
ttgatcgggagaataggcagagaagctcgctcggaaacgactacaggaaaggtgctagag
gtgctgtgggagctggctcacctccccaccctgcccaccagtctggttcagcaggccctg
gaggaacacctggggatcctcagcgacgcctacgccgtcaaggagaccgtgaaacgcagc
tacatcattaaatgtatcgaagacatcaagaagcatcacactcaggaggacaataaaggc
agcatcactcaaagctcatttcatattggcacttggcagaagaagaaatctaactctttg
gctaaagcttctcagcagagcactcctcagacggtctgggtcgtccccgctctgcggcag
ctgcacgaaatcacccgctccttcatcaaacagacgtaccagaaacaagacaagagcatc
atccaggacctgaagaagaacttcgagattgttaagctgatcacgggatctctcgtgtgc
tgccaccgactcgcggtgagcgcgtcagggaacaacggcctgtccgcttcgaccctggtg
gacggcagatacacctaccaggagtatctagacagccacctgcggttcctggcgttcttc
cttcaggaggccagcctgtacctggtctggaacagagccaaggagctctgggagtgtctg
gtctcgggtccggatgtctgtgagcttgaccgcgagttgtgttttgagtggttcaccaag
ggccagcatgacctggagagcgatgttcagcagcagctcttcaaggagaagattttgaaa
ctggagccctatgagatcaccatgaacgggttcggcctgtttaagaccttctttgagaac
gtgaatctgtgtgaccatcgtctgaagcgccagggaacccagctgtgtgtggagcgcctc
gacctggcagggatggattttatttggcgcatcgccatggaaacgcctgacgaagagata
gccaacgaagcgatccaactgataatcacttacagctataccaacctcaatccaaaaatg
aagaaggattctgtctctttgcacaagaagtttattgctgattgttacaagcggctggag
gccgcaagctcggccctgggcgggcccactctaactcatgctgttaccaaggcaacaaag
atgctgacggccactgccatgccaacggtagccacgtctgtacaatcaccttccaggtac
agaggggggtttggatccacaaagctggtgataattgaaagactgctgttattggctgaa
cgctacgtcatcactatagaggacttgtactcgtttcctcgcaccattctacctcacggg
gcgtctttcaacggacaccccgtcacgcttcacatcacctacgagtcaaccaaagacact
ttcactctagagactcacagtaacgagacgataggaagcatccgctggaagatctccgaa
cacttgagctgtccggtggataacgtccagatttttgccaatgatagcgtgctgaccatg
aatcgagaccagaagctgctctcgcagctcggcttcagcgacgagcagagtctgacggtg
aagagctccggcaccgggactccttctggcagctcggagtcgtcggcctcggcctccagc
agttccagctctgccgtcttcaattcagcctacgccttggagcaggagaagtccctccct
ggggtggtgatggctttagtgtgcaatgtgtttgagatgctttaccagctggctaacctt
gatgagccaaggatcatcctccgtgtgaggaagctgctgctgctaattccaacagacccc
gaagtgcaggacgcactcgacaacttcgttcccaaagaatccagcgtctggagccaccag
aaaaccctattcaccctcggccagggttcaggctcccgctctccgtccgtgacgcccaag
cagcagcatcagcccagcgccgcgtccatcttggagtcgctttttcgatcctctgcgccc
ggcatgtccaccttcagagtgctttacaatctggaggtgttgagttcgaagctgatgccg
acgtcagacgatgagatggccaaaaccagcagcaagtccttctgtgaaaacttcctcaaa
gcaggaggcctgagtctggtggtgaatgtcatgcagagagactccatcccgtccgaagtg
gactacgagacccgacaaggtgtcaactccatctgccttcagctggccaggttcctcctg
gttggtcagagtatgcctatggccctggacgatgacgtcatcagggacggcgacgcgctg
tcgtcccggccgttccgtaacgcggggcggacgggtcggcagctgtcgctctgcgggacc
ccagagaagtcctcctaccggcagatgtctctgtccgagcgctcgtccatacgggtggag
gagatcattcctgccgctcgcgttgccattcagaccatggaagtcggggacttcacctcc
accgtagcctgtttcatgcgtctcacctgggctgccgccgcgggccgactggacctcgtt
ggcagccagcagccaatcagagaaacccacagcgcgctgctgccacagggagtccgcacc
agagtcagcagcactggaagcaactgcagctccagcagcgaaggcgaggccaccccaacc
gcgctgcatgctgggatatgcgtccgacagcagagcgtctccatcaaggacgccatcatc
gcccgcgaggctctgtcactactggttacctgtctgcagctacgttgccagcagatgtct
tccttttacacccttccttccgtcagcgatttcattatcgatattctgctgggctctccc
agtgcagagatccgccgcgtggcctgcgatcagctgtacacgctgagtcagtccgacact
tcggccttcccggaagtccagaaacccaacctgttcctgctctcggtcatcctgaccgcc
cagctgccgctatggagccccacgtctgtcatgagaggcgtcaaccagaggttactctcc
cagtgcactgaatattttgacctgagatgccagcttctggatgaccttacctcctcagag
atggaggtgttgaaagtgagcgcggccaacatgctggaggacgagatttcttggctcgac
aactttgagcccagctggagctcagagatggagaccagcgaggcagacaacatcctgctg
gcaggacacctccgactcatcaagaccttgttgtctctgtgcggaaatgagaaagaacac
ctcggtccatcgctgatccagcagctgctcgatgacttcctgtttcgagcgtctcgcatc
atcatcaacagctccaacccgacgccctctccagccccgagccacgacttccaccccaag
tgcagcacggccagcagcagactggcagcctacgaggtcctggtgatgctggcggacagc
tcgctctccaacctgcggctcatcaccagagagctcctgtccatgcaccaccagtcagat
ccgtcactctgtaaggagtttgaccatttacctcccgtggagagccggtcggtctcgggt
tttgtcgggctgaaaaacggcggcgccacgtgttacatgaacgccgtgttccagcagctc
tacatgcagcccggcctgcctgaggccttcctgtccattgaggatgacacagaccagcct
gaggaaagcgtcttctaccaggtccagtcgctgtttggccacctgatggagagcaagctg
cagtactacgtgccagagaacttctggaagatcttcaagatgtggaacaaggagctgtac
gtcagagagcagcaggacgcttacgagtttttcaccagcctggtggaccagctcgacgaa
catctcaagaaaatggggcgggagcaaatcttcaaaaacacatttcagggaatttattcc
gaccagaagatttgtaaagattgtccgcacagatatgagcgtgaggaaacattcatggcc
ttgaacctcggcgtgacttcatgtcagagtttggagatttcgttagaccagtttgtcaga
ggagaggtgcttgagggcagcaacgcatactactgtgaaaagtgcaaggagaagagaacc
acagtgaagaggacatgcatcaaatctctacccagcgttctctgtatccacctcatgcga
ttcggcttcgactgggaaagcgggcgatccataaaatacgacgagcagattaggttcccc
tgggtgctgaacatggagccgtacaccgtgtccggaatggcccggcaggactgcagcggg
gacggggccgagggacgaggcgacggctcctcgggaggatcccccaggaagaaagttaca
atttcagagaactacgaactcgtgggcgttgtggtccacagtggccaggcgcacgcagga
cactactactccttcataaaagacagacgcggaaacgctcgtgggcgctggtacaagttc
aacgacaacgtagtggaggagtttgatatgaacgacgagactctggagtacgagtgtttt
ggcggagagtatcgccccaaggtttacgaccagtccaacccgtaccccgatgtgcgaagg
aggtactggaacgcctacatgctgttttaccagaagatcagcgaccagaactcgcctgcc
ctgccgaagaaaagccgagtcagcatcatgaggcaggaggcggaggatctttccctgtct
gccccatcctcccccgacgtctccccccagtcctctcctcggcccctgagggccaacaac
gaccgcctcaccctgctgacacgcctggtccgcaagggtgagaagaagggcctcttcgtg
gagaagatgcccgccagcatctttcagatggtcagagacgagaatctgaggttcatgaga
aacagggacgtctacaacagcgactacttcagcttcatcctctccctggcttcagtcaac
gcaacaaaactgaagcaccaaaactaccagcctatggccaaagaaagcctccagctggcc
gtccactttctcttccacacctacttgcacaccaaaaagaaactcagggtggacacggag
gaatggatggcggcggtggaggtgctgctgtctaagagcagcgaggcgtgtcagtggatg
gtgcagttcctggtcggatcagagggacgagaaatcatcagggtttgtctgctggagtgc
agcgttcgggaggtgaggacggtggtggcgtccgtcctggagaaaactctggagagcgcg
ctgcacttcggagacccgggcctggacagcctgaccgacgccttgctgtcgctgctggac
aaagacattcctgagaacgtgaaaaactgtgcccagtacttcaacctcttcagtaacttt
acccagaggggttgcggtccctgccagctgctgttgaagcactcagcctaccgtcggatg
ctcatcttcctgttaggacccaacaggcaaaacaaccagaaccggcggtggagtccggct
caggcccgggagttcctccacctccacagcagcctggcgctcatgacgctgcactctgac
ctcagcccccagcggaccctcgctcctgggggatccaagctgcccgcgagtagcgtccac
tcctccggcccgctcctcccgctgcactcggacattctcgcatctctcttcactccggag
ggacagccttaccttctcgaggtgatgtttgcgatgcgcgagctgtcggggcctctgtct
cttctgatagaaatggtcacctactgctcatactgcaacgagggcttttcgctgggagtg
ctgcagctactcaagagtcagatggagacggctccgcctcacgagctgaagaacgttttc
cagatgctgcaggagatactggttgttgaagaccctctgcagtcccagaggctcaagtac
gcctttgagtcggacaaaggcttgttagctttgatgcaccagagcaacaatgtggacagc
aggcgctgctaccagtgtgtgaagttcctggtcacattagctcagaagtgtcctccagcc
aaagattacttcaaagatttgtctggccactggagctgggccgtgcagtggctgcagaaa
aagatgactgaacattactggactccccagagtaacgtctccaatgagacgtccaccaat
aaaaccttccagcgcaccatttctgcacaggacaccttggcctatgccacggcattgtta
aacgagaaggagcagtctggcagcagcaacggctccgacggcagcccggcgaatgaaaac
gcagagcgcagcctccgacagggctcggagtctcccatgatgctcggcgattcaaagagc
gatctagaagacgtggactcttaa
DBGET
integrated database retrieval system
