Xiphophorus hellerii (green swordtail): 116725497
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Entry
116725497 CDS
T07363
Symbol
hdgfl2
Name
(RefSeq) hepatoma-derived growth factor-related protein 2
KO
K25065
hepatoma-derived growth factor-related protein 2
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xhe03400
]
116725497 (hdgfl2)
DNA repair and recombination proteins [BR:
xhe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
116725497 (hdgfl2)
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Gene cluster
GFIT
Motif
Pfam:
LEDGF
PWWP
Motif
Other DBs
NCBI-GeneID:
116725497
NCBI-ProteinID:
XP_032427469
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Position
9:15824590..15831661
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AA seq
661 aa
AA seq
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MPHNFQAGDLVFAKMKGYPHWPARIEDVADGAVKPPPNKIPIFFFGTHETAFLAAKDLFP
YEKYRERYGKPNKRKGFNEGLWEIQNNPHASYSAPPAQASSSDSEGNEAAGGEGGGSDEE
EDEEDAPVPQKADSGSEDESDSGSDDRGRGGGIKRKPQAPKRPPPPKKARGSSSDRDEEE
SRSPSESEPTASESDSGKNSDKDFTPEKKSGGRGGKKAGGRGKKKKGSSDSDSESGSGSE
KKVADSDSEDEKPRPALSGSESQSGSKSESESDPPPRKGPQPRKKEKAAPKPRARKPKPA
PAKRAPSSSSDSDSDSEPDRISEWKKRDEERRRELEERRKKEEAEELRRLREREKEEEEK
KKKDKEKVKKESESDSSSSSDEGIDDHPLKKSKKPPPPPIPAPSDSDSPPPAEVKRTSKK
VDKQKARIKKEKERKERKEKELKEKKARRAEDKSRARSKPEKPKRRSERPPEKKVEKKKE
PSPEERLQKLHTDIKFALKVDNPDIERCLKALEELEAVPVTSQILHKNAEVIATLKKIRR
YKASTAVMEKASDVYNKLKLRFVGKPELPAKPQIENKETENDEKQSQNTESTPVNGESEE
KKENAEEDEKPKSPLKEENNDGQSSSPNRPSSDSPAPQQTPTYEEADGTVSAEPEPAAVE
T
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgccacacaacttccaggccggagacctggtcttcgctaaaatgaagggatacccccac
tggccagctaggattgaagatgtggctgatggagctgtgaaaccaccacctaataaaatc
cctattttcttctttgggactcatgaaacagcattccttgcagcaaaagaccttttccca
tatgaaaagtaccgagagcgctacggcaagcccaacaaaaggaagggattcaatgaaggt
ttatgggagatccagaacaatccacatgcctcctacagtgctccacctgcacaggctagc
tcatctgatagtgagggcaatgaagcagcaggaggagaaggagggggaagtgacgaagag
gaggacgaagaagacgctccagttcctcaaaaagccgactccggcagcgaggacgagtca
gattctgggagtgacgacagagggaggggaggtgggataaagcgaaagccacaggctccc
aagcggcctcctcctccaaaaaaagcgcgaggctcctccagcgacagagacgaagaggag
agcaggtctccgtctgaatcagaaccgacggcttcagagtctgactctggcaaaaacagc
gacaaggattttactccagagaagaaatccggtggacgaggaggaaagaaagccggtggc
agagggaagaagaagaaaggttcttctgactcagattcagagtcgggatcagggtcagag
aagaaagtcgcagacagcgactctgaggacgagaagccacggccggctctgtccggctcc
gagtcccagtctggctcaaagtcagagtcagagtctgatccgcctccccgcaagggcccg
cagcctcgcaagaaagagaaagccgctccaaagcctcgagcaagaaaacccaaacctgcc
ccagctaaacgagcaccgtcatcatcctccgacagcgacagtgacagtgaaccggaccgc
atcagtgaatggaagaaacgagatgaggagcgcagacgagagcttgaggagcggcggaaa
aaggaggaggctgaggagctccgccggctacgtgagagagagaaggaggaggaggagaaa
aagaaaaaagacaaagaaaaggtcaaaaaagagagtgaaagtgacagcagtagcagctcg
gatgaaggtatagacgatcatccgctgaagaagtccaagaaaccgcctccgcccccgatc
cccgcaccctctgactctgattctccacctccagcagaggtgaaaagaacatcaaagaaa
gtagacaaacagaaggcaagaataaagaaggagaaggaaagaaaagaaagaaaggagaag
gagctgaaagagaagaaagccagacgggcggaggacaagtccagagcgaggtctaagcct
gaaaagcccaaacgccgatcagagaggccacctgagaagaaagtggaaaagaaaaaagag
ccatcaccagaggaaaggctacagaaactccacacagacattaaatttgcacttaaagtg
gacaacccagacattgagcgttgtctaaaagcgctcgaagagcttgaagctgtacctgtc
accagccagattctccataaaaatgctgaagttattgccacactaaaaaagattcggcgg
tataaagccagcactgcagtcatggagaaggccagcgatgtctataacaagttaaaactt
cgcttcgtgggaaaaccagagctgccagctaagcctcaaatagagaacaaagaaacggag
aatgatgaaaagcagtcacaaaacactgaatccacacctgtgaatggggaatcggaggag
aaaaaagagaatgcagaggaagacgaaaagcccaaatcgcctctgaaagaggagaacaac
gacggccaaagttcaagtccaaacaggcccagttcagacagcccagctccacaacagaca
cccacatatgaggaagcagacggtaccgtctcagcagagccagaaccggccgctgtagaa
acctaa
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