Xiphophorus hellerii (green swordtail): 116725513
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Entry
116725513 CDS
T07363
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein M-like isoform X1
KO
K12887
heterogeneous nuclear ribonucleoprotein M
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116725513
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xhe03041
]
116725513
Spliceosome [BR:
xhe03041
]
Common components
Common spliceosomal components
hnRNP proteins
116725513
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_MARF1
RBD_DEAH11
DUF7552
Motif
Other DBs
NCBI-GeneID:
116725513
NCBI-ProteinID:
XP_032427502
LinkDB
All DBs
Position
9:13662590..13669378
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AA seq
695 aa
AA seq
DB search
MSSEQGENNIEATIELPQQEGINGKPKNESSSSRKERPPKRGGGGRYDPYGNVKRYRVFV
SNIPYDVKWQALKDLMKEKVGEVTYVEHLMDAEGKSRGCAVVEFRTEELMKKAVESVNKH
NLNGRPLKVKEDPDGVIAQREIGKSQQAGAHPGGMGGMGGMDRMGGMDRMGGMDRMGGMD
RMGGMDRMGPGPGGPLVSIPPSLLNNPNIPNEIIHGLQTGRIGSTVFVANLDYKVGWKKL
KEVFGMAGVVLRTDILEDRDGKSRGMGTVTFEMPIEAVQAVSMFNGQLLFNRTMHVKLDE
KSLPKDFGQPDRGSSLPRGLSGIGLGLGPGGQPIDATMLNRGSGGGGGGGGMGNMGPGGM
DGMGFGNVGGRMGGGMDNFGGMNMDRFGSSGMGRMNEMDRGIGGAFDREFGRNEMGMSRN
NFGDSFERGMGNSLGMDRMNSGMDRIGGSLDRMGGMGMDRMDRVSDLDRMGSGFDRMGSG
MDRLGPSMDRLGPGLDRMSSSMDRLGPGGFDRLGPSSLDRMGGSMDFGSSMGMDRMGNTG
LDRMGSSFDRMGSAGGLDRFSSGGLDRMSSGMDRMGSGGVGGQFDRSGDMDRGFGGNSFG
GAGAAGPGSGGANMRKGCQIFVRNLPFDFTWKMLKDTFNTCGMVQYADIKMENGKSKGCG
VVRFDNPETAERACRTMNGYRLNGREIDVRIDRNA
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtgagcagggagaaaacaacatcgaggcgacgatcgagttgccgcagcaggaa
ggaattaatgggaaacccaagaatgaatccagttcaagcaggaaggagagaccccctaag
agaggtggaggtggtcgctatgatccctatggcaacgtgaaaagatacagagtgtttgtc
agtaacatcccctacgatgtgaaatggcaagccctcaaagacctgatgaaagagaaagtg
ggtgaggtaacgtacgtggaacacttaatggacgcagaaggcaaatcgaggggttgcgct
gttgttgagttcagaacagaagaacttatgaagaaagcagtggaaagtgtcaacaagcac
aacctcaacgggcggcctcttaaagtgaaggaggatcctgatggcgtcattgctcagaga
gagattggcaagtcccaacaagctggagctcacccaggaggcatgggaggaatggggggt
atggatcgcatggggggtatggatcgcatgggagggatggatcgtatggggggcatggat
cgcatgggagggatggatcgtatggggcccggaccaggaggccccctggtcagcattcct
cccagccttttgaacaaccccaacatccccaatgagatcattcatggtcttcagactggc
aggattggaagcaccgtctttgtggccaatctggattacaaagtgggttggaagaagctg
aaagaggtgttcggcatggcaggtgtcgtgttgaggacagacattttggaggacagggat
ggcaaaagcagaggcatgggcacagtgacgtttgaaatgcccattgaagcagtccaagct
gtctctatgttcaatgggcagctcttatttaacaggaccatgcatgtcaagctggatgag
aaatccctccctaaagattttggacaaccagatagaggatcctctcttccccgtggactg
agtggtattggtttggggctgggacccggaggtcagcctattgatgctaccatgctgaac
agaggaagtggaggtggtggtggtggtggtggcatggggaacatgggccctggaggaatg
gatggtatgggatttggcaatgtgggcggtcgcatgggaggaggaatggacaactttggc
ggaatgaacatggatcgttttggttcttcaggcatgggaagaatgaacgagatggaccgt
gggattggtggtgcttttgacagggaatttgggcgaaatgaaatgggaatgtctcgcaat
aattttggagactcctttgaaagaggaatgggaaattccctcggcatggaccgcatgaac
tccggaatggaccgcataggaggcagcttggatcgcatgggaggaatgggcatggacaga
atggatcgtgtgtctgatctggacaggatgggatctggctttgaccgtatgggctctggg
atggaccgcctggggccaagtatggaccggctcggaccaggcctggaccgcatgtcatca
agcatggaccgcctcggccctggaggatttgaccgactcggcccgtctagcctggatcgc
atgggaggcagcatggactttggctcctccatgggtatggatcgcatgggcaacaccggg
ctcgatagaatgggaagcagctttgatcgcatggggtctgctggaggcctcgaccgtttc
tcctctggagggcttgaccgcatgagttctggaatggaccgaatgggatctggaggcgtc
ggtggtcagtttgatcggtctggagatatggaccgaggatttggtgggaattccttcgga
ggagccggagctgccgggcctggaagtggtggagccaacatgaggaagggatgccagatc
tttgtcagaaatctgccatttgatttcacctggaagatgctgaaggacacctttaataca
tgtggtatggtccagtatgctgatatcaagatggagaatgggaaatccaagggctgtggc
gtggtccgttttgacaaccctgaaactgctgagcgcgcctgcagaaccatgaatggctat
cgtctgaacgggagagagatcgacgttaggattgatagaaacgcataa
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