KEGG   Xiphophorus hellerii (green swordtail): 116725534
Entry
116725534         CDS       T07363                                 
Symbol
polr2e
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
xhe  Xiphophorus hellerii (green swordtail)
Pathway
xhe03020  RNA polymerase
xhe03420  Nucleotide excision repair
xhe04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    116725534 (polr2e)
  09124 Replication and repair
   03420 Nucleotide excision repair
    116725534 (polr2e)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    116725534 (polr2e)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:xhe03021]
    116725534 (polr2e)
   03400 DNA repair and recombination proteins [BR:xhe03400]
    116725534 (polr2e)
Transcription machinery [BR:xhe03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     116725534 (polr2e)
  RNA polymerase III system
   RNA polymerase III
     116725534 (polr2e)
  RNA polymerase I system
   RNA polymerase I
     116725534 (polr2e)
DNA repair and recombination proteins [BR:xhe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      116725534 (polr2e)
SSDB
Motif
Pfam: RNA_pol_Rpb5_N RNA_pol_Rpb5_C NA-iREase1 NYD-SP12_N
Other DBs
NCBI-GeneID: 116725534
NCBI-ProteinID: XP_032427536
LinkDB
Position
9:complement(20041868..20044874)
AA seq 210 aa
MDDEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKSQFGDKPSEGRPRRTDLTV
LVAHNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRAIIVVQMGMTPSAKQSLVD
MAPKYILEQFLQQELLINITEHELVPEHIVMTKEEVTELLARYKLKESQLPRIQAGDPVA
RYFGLKRGQVVKIIRPSETAGRYITYRLVQ
NT seq 633 nt   +upstreamnt  +downstreamnt
atggatgacgaggaggaaacttacaggctgtggaaaatccgcaaaaccatcatgcagctc
tgccatgacagaggctatttggtgacgcaagacgagttggatcagactctggaggagttc
aagagtcagttcggagacaaacccagcgaaggtcgacccagacgtacagaccttacagtg
ctggtggcacataatgatgatcccacagaccagatgtttgttttctttcctgaggagccc
aaagtggggataaagaccatcaagatgtactgccagcggatgcaggaggagaacatcact
agagccatcattgtggttcagatgggcatgacgccctcggccaagcagtctctagtggac
atggcacccaagtacatactggagcagtttctgcagcaggagctgcttattaacatcaca
gagcatgagcttgttcctgagcacatcgtcatgacaaaagaggaagtgactgaacttcta
gccagatataagttaaaggaaagccagttaccaaggatacaggccggagaccccgtggct
cgctactttggattgaagagaggacaggttgtgaaaatcatccgacccagtgaaactgct
ggcaggtacatcacctacaggctggtccagtga

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