Xiphophorus hellerii (green swordtail): 116725660
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Entry
116725660 CDS
T07363
Name
(RefSeq) neurogenic locus notch homolog protein 2-like
KO
K20994
Notch 2
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
116725660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
EGF_2
Ank_2
Ank
Notch
EGF_3
NOD
NODP
Ank_3
Ank_5
Ank_4
EGF_Teneurin
EGF_DL_JAG
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
116725660
NCBI-ProteinID:
XP_032427760
LinkDB
All DBs
Position
9:17754715..17806801
Genome browser
AA seq
2493 aa
AA seq
DB search
MEHIPGFCLGKALVLVFYFTRLTLGLQCVDEKAPCINNATCLTFNNGTEYCRCAPGYLGE
YCQHKDPCQPGYCLNGGNCSVSMSAGVPVPGSASCTCPLGYTGQRCQTPQNSTCYPNNPC
ANKGVCTLLSLVKYKCECTRGWTGPRCEHEDSCLSSPCANGGRCSSLPGGSYTCSCLTGY
HGPRCLNDTNECADTPSPCQNEGECVNTPGSYKCVCKPGFTGLHCESSYIPCSPSPCLNG
GTCHQTSETTYSCHCLPGFNGTNCENNIDDCPGHQCANGGTCIDGVNTYNCQCPPEWTGQ
HCTEDVDECRLQPNTCQNGGTCSNLIGGYVCVCVNGWSGLDCSENIDDCSTAACSQGSTC
IDRVASFICVCPPGKTGLLCHRDDACISNPCREGSHCDTNPITGMFNCNCPPGYIGNTCN
RDRDECSIGPNPCEHGGQCVNTDGSFTCNCVKGYSGPRCEQDVNECASNPCLNDGTCLDR
IGEYTCICMPGFEGSHCEIDVNECLSSPCLNQGKCVDQVSRFICQCPAGFSGDMCQIDID
ECSSTPCLNGAKCIDRPNQYDCECAEGFTGRLCGENINDCHPPPCHHGVCKDGIATYSCE
CYPGYTGSICNIQVQECLSNPCQNRGRCIDLVDAYQCNCPSGTSGVNCEINENDCASNPC
KHGECQDGINEYKCVCSPGYTGDQCDVNINECNSNPCMSGGTCVDIVNGFQCLCPPGTYG
PLCLSGTDHCASQPCVQGDCIEQQHGYRCECKPGWVGQHCEQQKNECLPNPCLNGAICQD
LLNGYTCHCKPGFRGVNCEKNIDECASGPCLNHGFCRDGINSYTCQCNPPFTGKHCEVEQ
VPCASHPCERGGVCLPSQDYTSYACRCRPGWQGKRCNEDVNECMKNPCMNGGLCINTPGS
YVCQCQRGYSGHNCQINVDDCSPNPCLNGGHCVDKVASFSCDCRAGFEGDRCETDVNECA
SEPCRNGGVCRDYVNSFVCRCLPGFSGIQCEHNILECTESSCLNNGTCIDDINTFSCRCR
HGFYGTFCEFEHNECDSQPCKNGGTCTDGLGTYRCTCPVGYSGQNCQNYVNLCNQVKCKN
GGTCSQTATSWTCRCQMGWTGLYCDVPNMSCQDYAARSGLAVEHVCKNAGHCVNVGNSHQ
CKCQSGYTGSYCEEMVDECQSNPCRNGATCKDYQGTYECVCKSGFQGVNCEYDVDECHSK
PCLNGGRCINLINRFTCICPPGTHGVQCEVNQDDCAPSPGSSEPRCRNGGQCVDGVGRYT
CSCPPGFVGEHCEGDVNECQSGPCSPAGTLDCIELVNDYQCLCRLGYTGRHCESMVDLCV
SQPCRNGGVCTMNMSSVHGYTCTCPPGFSGFSCGEIEDFNCARLSCQNGGRCMKSPVGQL
YCQCQPGFSGSHCEKEQMCSVPCQNGGVCVKDPSNPFQHSCRCPDNFFGRFCENKVPGPL
RCPYVQCEVRLGDNVCDEQCNNHECQWDGGDCSLSWLQPWINCTASVPCWDLFKNGQCDK
ECDNLGCLFDSFECMEVHTSPCKYDMYCKDHFGNGICDNSCYTEACGWDGLDCSNNVPAD
LAEGKLVIVVLLQPKELLGDLRGFLRSLGALLHTNVRVMLDENKEPMVYPYYGEQRQTDQ
SRRKRELAREVIGSVVHLNIDNRECSKSSTSNCFSNTSIAASFIAAAHIKADLPYPLVSV
KSAPIEKPPPPLLYLIGVAALIVLLILVLGMLAAKKKHKHGVLWLPDGFLATKNDKRREP
VGQDDFDMKNFKTHDGSMVDGGQSQRWLDDETPSKKPRTEDKPLLSIPMDGGIDRREWTL
QHHKAADITLTPPQADLDADCLDVNVKGPDGFTPLMVASLRNGGGPDCSLHGDEEEESGG
DEPGPSVISDLIAQGANLMAQTDRTGETALHLAARYARADAAKRLLDAGADPNAHDNMGR
TPLHAAVAADAQGVFQILIRNRATELDARMNDGTTPLVLAARLAVEGMVEELIHCHADIN
AVDDHGKSALHWAAAVNNVEATLVLLKNGANRDMQDNKEETPLFLAAREGSFEAAQVLLD
HYSNRDITDHLDRLPRDTAQERMHHDIVRLLDQYNLVHSPHNGPNHMGGGGNSVMCGANG
GGFIGMRPGPQGKKSRSRGAGAKAGGVGGGPKELKDMKVKRRKKPTGGEGPGLVAAGGGG
GGGAGGGSTNGVKAAGGLPSESSVTMSPVDSLESPHSYAGDVSAAGSNTANSPPLLSSPT
SRAMLPPVSHMLGQQQGWGGVAKHGYNGHMFGLLPHTMRGAHPGMSHGQGAMMTPMNVTM
IREPLPPIVTFQMVPTGTGQAMLKQPQSGQVQVNQSQGQNQSLCHTQPVPGHVRCSPGMI
YPDQMNVAVPSQNLQHPHNIRHSNGIEGQSRPLPPYTPMQSPVDKYPTPPSQHSHVPAGS
EGTTPGRSTHPQNEHPYLTPSPESPDPWSSSSPHSNSDWSDVTTSPTPLGNSHHALPSSR
HTHIPEQAQMQPPSQQMQPPAQQPQLGNMQVFA
NT seq
7482 nt
NT seq
+upstream
nt +downstream
nt
atggaacacatacccggtttctgccttggcaaggccctagtcttggtcttctacttcact
cggctaactcttggtctgcagtgtgtggatgaaaaggcaccttgtattaacaacgcaaca
tgcctgacctttaacaatggcacagaatactgcaggtgtgctccaggttatttgggagag
tactgtcagcacaaggacccttgtcaaccaggatactgcctgaatggggggaactgttct
gtgtccatgtcagctggggttcctgttcctggtagcgcctcctgcacctgccctcttggc
tacaccggacagcgctgccaaactccccaaaactccacgtgttatccaaacaacccatgc
gccaacaagggggtctgtacactgctgtcccttgtcaagtacaagtgtgagtgcaccaga
ggatggacaggtccacgctgtgagcatgaggacagctgtctctccagtccctgtgccaat
ggaggaaggtgcagctctctgcctggtggcagctacacctgttcatgtctcaccggctac
catggtccgcgctgccttaatgacacaaatgaatgtgcagacacaccctctccctgccag
aatgaaggcgagtgtgtcaacacccctggctcttacaagtgtgtctgtaagccaggcttc
acgggtcttcactgtgagagttcatacatcccctgctcaccttcgccatgtctaaacgga
ggcacctgccaccaaacctctgaaaccacctactcatgccactgccttccaggttttaat
ggaactaactgtgagaacaacattgacgactgtcctggccatcagtgtgccaatggagga
acatgcatagatggagtcaatacctacaactgtcagtgtcctccagagtggactggtcag
cattgcacagaggatgtggacgagtgtcggctgcagccaaatacttgccaaaatggcggc
acatgtagcaacttgatcggtggctacgtctgcgtgtgcgtcaacggctggagcggcctc
gactgctctgagaacatcgatgactgctcgacagccgcatgcagccagggctccacttgt
atcgaccgtgttgcgtcttttatctgtgtctgtcccccaggaaagacaggtttgctctgc
catagagacgatgcctgcatcagtaacccctgcagagagggctcacattgcgacaccaac
cccatcactgggatgtttaactgtaactgtccaccgggatatataggcaatacctgcaac
agagacagagatgaatgcagcattggtcctaacccatgtgagcatggcggtcagtgtgtg
aacactgacggctccttcacttgtaactgtgtcaaaggttactcagggcctcggtgtgaa
caagatgtcaatgaatgtgcctccaacccctgcctgaatgatggcacatgtctggatcgc
atcggggaatacacctgtatctgcatgcccggatttgaggggagtcattgtgagattgac
gtgaatgagtgtttgagctctccctgtctgaaccagggtaaatgtgtggaccaggtcagc
cgtttcatttgccaatgcccagcaggtttcagcggagatatgtgccaaatagacatagat
gagtgctccagtacgccttgtttaaatggagccaagtgtatcgatcgacccaatcaatat
gattgtgaatgtgcagaaggcttcactggtcggctttgtggggagaacatcaatgactgc
catccaccaccttgtcatcacggtgtgtgtaaggacggcattgccacctactcttgtgag
tgctaccctggctacaccggctccatctgcaacatccaggtccaggagtgcctcagcaac
ccgtgccaaaatcgagggcgctgcattgacttggttgatgcgtaccagtgtaactgtcca
tcaggaacctcaggtgtgaactgtgagatcaatgagaacgactgtgccagcaacccttgt
aagcacggagagtgccaagatggcatcaatgagtacaaatgtgtgtgttcccctggatac
acaggagatcagtgtgatgtcaacatcaatgagtgtaactcaaacccatgcatgagtggg
ggaacctgtgtggacatagtgaatgggttccagtgcctgtgcccacccggcacctacggc
ccgctgtgcctttcaggaactgatcactgtgcttcccagccttgtgtacaaggagattgc
atcgagcagcaacacgggtaccgatgtgagtgtaagcccggttgggtcgggcaacactgt
gaacagcagaagaacgagtgtctgccgaatccatgcttaaatggggccatctgccaggat
ctgctcaatggctacacctgtcattgcaaaccaggattcagaggggtcaactgtgagaag
aacatagatgagtgtgcatcagggccgtgtctgaaccacggcttttgtagagatggaatc
aacagttacacgtgtcagtgtaatcctccattcacaggaaaacactgtgaggtggagcag
gttccctgtgcctctcatccatgtgagaggggaggggtttgccttccgtctcaagattac
acctcttatgcctgccgatgtcgccctggctggcaagggaaacgctgcaatgaagacgtg
aacgaatgcatgaagaacccctgcatgaacggtggcctctgcattaacaccccaggaagc
tacgtgtgtcaatgtcaacgtggatacagcggacacaactgtcagataaatgtagatgac
tgctcaccaaacccctgcctgaatggaggccattgtgtggacaaagtggcgagtttctcc
tgtgattgccgcgcgggttttgaaggtgatcgctgtgagactgatgtaaatgaatgcgcc
agcgagccctgcaggaatggaggcgtctgccgtgactacgtgaacagcttcgtgtgcagg
tgcctaccgggcttcagtggaatccagtgtgaacacaacattcttgaatgcacagagagc
tcctgcctcaataacggaacttgcattgatgacattaataccttttcctgccgttgccgg
catggtttttacggaacgttctgtgagtttgagcacaacgaatgtgattctcagccctgt
aaaaacggaggcacttgcacagacggcctggggacttaccgctgcacctgtcctgtggga
tacagcggacagaactgtcagaactatgtaaacttgtgcaaccaggtgaaatgtaagaac
ggtggcacctgctctcagacagctacatcctggacctgccgctgtcagatggggtggaca
ggactttactgtgatgtccccaacatgtcctgtcaggactatgctgccaggagcggtttg
gcagtggagcatgtatgtaagaatgcgggtcactgtgttaatgtggggaactcccatcag
tgcaagtgccagtcaggatacactggcagctactgtgaggagatggtggacgagtgccag
tcgaatccctgtagaaatggcgctacgtgcaaggattatcagggcacatacgaatgtgta
tgtaaatcaggcttccaaggagtgaactgtgagtatgacgttgacgaatgtcactctaag
ccctgcctcaacggaggaagatgtatcaacctcatcaaccgctttacatgcatctgccca
ccaggaacacatggagtccaatgtgaggtgaaccaggatgactgcgcccccagcccaggc
tcttctgagccgcgctgcagaaacggaggacagtgtgttgacggcgtgggccgttacacc
tgctcctgtcctccagggttcgttggggaacactgcgagggcgacgtcaatgaatgccag
tctggaccctgcagtcctgctggcaccctcgactgcatcgagctggtcaatgattatcag
tgtctctgtcgccttggatacacaggtcgccattgtgaatcgatggtggatctgtgtgtg
tcgcagccgtgccgtaacggcggcgtttgcaccatgaacatgagctcagtacacggctac
acctgcacatgtccccctggcttttctggattcagctgtggtgaaatagaggatttcaac
tgtgcaagactgagctgccaaaacggcggccgctgcatgaagtcaccagtaggacaactt
tattgccagtgccagccgggcttcagcgggtcacactgtgagaaggagcagatgtgctca
gtgccctgccagaacggaggagtctgtgtcaaagacccgtccaacccgtttcagcacagc
tgccggtgtcccgacaacttcttcggacgattctgtgagaacaaagtgcctgggcctctg
agatgcccttacgtacagtgtgaggtacgactaggggataacgtgtgtgacgagcaatgc
aacaaccatgaatgccagtgggatggaggcgattgctcgctcagctggctgcagccgtgg
atcaactgcacagccagtgttccctgctgggatctctttaagaacggacagtgtgacaag
gagtgtgacaaccttggttgtctctttgacagctttgaatgcatggaggtccacacaagc
ccatgcaagtatgacatgtactgcaaagaccactttggaaatgggatctgtgacaatagc
tgctacacagaggcctgtggatgggacggactggactgctctaacaacgtaccggctgat
ttggcggaaggcaagctggttattgtggtcctactgcagccaaaggagctgctgggagat
ctgaggggttttctgcgctcgctgggagccctgctccacaccaacgtgcgggtgatgctg
gacgagaacaaggagccgatggtgtacccttactatggagagcagagacagactgaccaa
agcagaaggaagcgggagctggccagagaggttattggctctgtggtgcacctgaacatc
gataaccgtgaatgctccaagagctccacctccaactgcttctccaacacttctatagcc
gcctcctttattgcagcggctcacatcaaggccgacctgccttacccactagtgtctgtt
aagagtgctccaatagaaaagccccccccaccattactgtacctgattggagttgctgct
ctcatcgttctgctgattctggtgctggggatgctggcagccaagaagaaacataaacat
ggagttctgtggctccccgatggcttcctggccactaaaaatgacaagaggagagagcct
gttggacaggacgactttgacatgaagaatttcaagacccatgatggaagcatggttgat
ggaggtcagagtcagagatggctcgatgatgaaactccatccaaaaagccaagaactgaa
gacaagcctctgctttccatcccaatggatggaggtatcgaccgtagagaatggaccctg
cagcatcacaaagctgcagacatcactctcactcctccccaggctgacttagatgctgac
tgtctggacgttaatgtcaagggacctgatggcttcacccctctgatggtggcgtccctg
cgtaacggtggaggtccggactgcagcctgcatggagacgaggaagaagagagcggagga
gatgaaccgggaccgagtgtcatttcagatctgatcgctcagggcgcgaatctgatggct
cagactgaccgcacaggcgaaaccgctctccacctggccgcccgctacgctcgggccgac
gctgccaagagactgctggacgccggagcggatcccaacgctcatgacaacatgggcaga
acgccacttcacgccgccgtggcagccgacgcacaaggagtctttcagattctgatccgt
aaccgcgctacagaattggacgccaggatgaacgacggtacgacgccgctggtcctggca
gcacggctcgctgtggagggcatggtagaagagctgatccactgccacgccgacatcaat
gctgtagatgaccacggtaaatctgctttgcactgggcagctgcagttaacaatgtggag
gctactcttgtgcttctgaagaatggagccaaccgcgacatgcaagacaataaggaggag
acccccttgttcctcgcagcacgagaaggcagctttgaggcggctcaagttcttctcgat
cactactccaaccgcgacatcaccgatcacctggaccggctgccccgcgacacagctcaa
gagcgcatgcaccatgacatagtccgcctgctggaccagtacaacctggttcacagccca
cacaacggtcccaaccacatgggtggaggtggaaactctgtgatgtgtggggcaaacggt
ggaggcttcatcggcatgcggcccggaccccaaggtaagaagagcagaagcagaggagct
ggggcgaaggccgggggagtcggcggggggccaaaggagcttaaagacatgaaagtaaag
agaaggaagaaacctactggaggagagggtccgggtctggttgcggcaggtggaggaggc
ggaggaggtgcaggtggaggcagcactaacggtgtaaaggcagcaggaggacttccttcg
gagagctcagtcaccatgtcgcctgtcgactccctggagtcgcctcactcctacgcaggc
gacgtttccgccgcaggctccaacaccgccaactctcctcccctcctgagcagtcccacc
tccagagcaatgctgcccccggtcagccacatgctggggcagcagcagggctggggggga
gtggccaagcacggctacaacggtcacatgttcggtctcctcccgcacaccatgagagga
gctcaccccggcatgagccacggccagggcgccatgatgacccccatgaacgtcaccatg
atcagggagccgctgccccccatcgtcacctttcagatggttcccacgggaacgggccag
gccatgctgaagcagccccaatcagggcaggtacaagtcaaccagagccagggccagaac
cagagtctgtgtcacacccagccggtaccgggacatgtccgctgcagcccggggatgatc
tacccggaccagatgaatgtggcggtgccctcccaaaacctgcagcatcctcacaacatc
agacactccaacgggatagagggccagtctcgaccgctgccgccttacacgcccatgcaa
agcccggtggataaataccctacccctccctcccagcacagccatgtccccgctgggtca
gagggcaccaccccgggccgctccacccacccgcagaacgagcacccatacctcaccccc
tcccccgaatccccggacccctggtcctcctcctctccacactctaactcggactggtcc
gacgtcaccaccagccccaccccgctggggaactcccaccacgcactgccatcgtcacgc
cacacacacattccagagcaggcgcagatgcagccgccgtcgcagcagatgcagccgcct
gcgcagcaacctcagctcggaaacatgcaggtgttcgcatga
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integrated database retrieval system
