Xiphophorus hellerii (green swordtail): 116725714
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Entry
116725714 CDS
T07363
Symbol
sox2
Name
(RefSeq) transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116725714 (sox2)
Transcription factors [BR:
xhe03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
116725714 (sox2)
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
116725714
NCBI-ProteinID:
XP_032427888
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All DBs
Position
9:299545..476019
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AA seq
322 aa
AA seq
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MYNMMETELKPPAPQTNTGGTGNPNTPGNGPNQKNSPERVKRPMNAFMVWSRGQRRKMAQ
ENPKMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMK
KDKYTLPGGLLAPGGNGMGTGVGVGVGAGLGGGVNQRMDSYAAHMNGWTNGGYGMMQDQL
SYQHPGLNAHNPGQMQSMHRYDMSALQYNSMTSSQSYMNGSPTYSMSYSQQSTPGMTALG
SMGPSSVVKSESSSSSPPVVTSSSHRAAPGCQSGDLRDMISMYLPGAEVSDQSAQSRLHM
SGHYQSTVPGTTINGTLPLTHM
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggagactgaactgaagcccccagctccccagaccaacacggggggc
acgggcaaccccaacaccccggggaacggcccgaaccagaaaaacagcccggagcgggtc
aagagacccatgaacgcgttcatggtgtggtcccggggccagaggaggaagatggcgcaa
gaaaaccccaaaatgcacaactccgaaatcagcaagaggctgggcgccgagtggaaactt
ctgtcggaaagcgagaagagaccgttcatcgacgaagccaagcggctgagggccctgcac
atgaaggagcacccggattacaaataccggccccggcggaaaaccaagaccctcatgaag
aaggacaagtacaccctgcccggcgggctgctggcccctggaggaaacgggatggggact
ggggtcggcgtgggagtgggggccggactgggcggtggggtgaaccagcggatggacagc
tatgcggcgcacatgaacggctggaccaacggcggctacgggatgatgcaggaccagctg
agctaccagcacccggggctgaacgcgcacaacccgggccagatgcagtccatgcaccgc
tacgacatgagcgccctgcagtacaactccatgacgagctcccagagctacatgaacggc
tccccgacctactccatgtcctactcccagcagagcacgccggggatgaccgcgctgggc
tccatggggccttcctcggtggtcaagtccgagtccagcagctccagcccgcccgtcgtc
acctcgtcgtcccaccgggccgccccgggctgccagagcggcgacctgagggacatgatc
agcatgtacctgccgggggccgaggtgagcgaccagagcgcccagagcaggttacacatg
tccgggcactaccagagcaccgtgcccgggacgacgatcaacggcacgctgccattaaca
cacatgtaa
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