Xiphophorus hellerii (green swordtail): 116725715
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Entry
116725715 CDS
T07363
Name
(RefSeq) fibrillin-2-like
KO
K23342
fibrillin 2/3
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116725715
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
xhe00536
]
116725715
Glycosaminoglycan binding proteins [BR:
xhe00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
116725715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
EGF
FXa_inhibition
TB
hEGF
EGF_3
Plasmod_Pvs28
Fibrillin_U_N
EGF_FBN_1st
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
116725715
NCBI-ProteinID:
XP_032427895
LinkDB
All DBs
Position
9:complement(13715403..13790369)
Genome browser
AA seq
2888 aa
AA seq
DB search
MGSGKLAQMLLGWAAVCLSAMQVTCAQTGSGPYQANRFTGSVDQREAQRVRRRGQDTLKG
PNVCGSRFHSYCCPGWKTLSGGNQCIVPICRNSCGDGFCSRPNMCTCSNGQLSPSCGGGG
VQSCNIRCMNGGSCMEDSCSCAKGYTGNHCGQPVCDSGCQNGGRCIGPNRCACVYGFTGP
QCERDYRTGPCFTQVSNQMCQGQLSGIVCTKTLCCATIGRAWGHPCEQCPAQPHPCRRGF
IPNIRTGACQDVDECQAVPGLCSGGNCINTVGSYECKCPAGHRQSETSHKCEDIDECSTI
PGVCDGGECTNTAGSYVCTCPRGYISSTDGSRCVDQRVGTCFSALANGRCAAELNGQYTK
MQCCCETGRCWALGQIPEMCPVRGSDEFRRLCIVGVPQGLPHTFPNGYFPSNNGNYGFKL
PSIPNGNGNGRPHTNGGGDSFGENGGTFGGNGGTFGGNGGGLNHLNIGTVSVNESLDFCQ
HFTHLCLNGRCIPTRGSYRCECNMGYKQDVRGECIDVDECLNNPCINGDCVNTPGAYHCK
CHEGYQGTPTKQACIDIDECIVNGVMCRNGRCVNTEGSFQCICNAGFELTPDGKNCIDHD
ECATTNMCLNGMCINEDGSFKCICKPGFTLAPSGRYCIDTDECLTPGICMNGRCINSEGS
FRCECPPGLAVDVDGRVCVDTHMRTTCYGTIKMGTCSRPFPGAVTKSECCCANPEHGFGE
PCQPCPSRNSAEFQAVCSGGIGITTDGRDINECALDPEICQNGMCENLRGSYRCICNIGY
ESDTSGKNCADINECLVNRLLCDNGLCRNTPGSYTCSCPKGFVFKPDSETCEDINECDSS
PCINGLCRNVAGSFNCECAHGSKLDSTNTICVDSMKSTCWLTIQDNRCEVNINGATLKSE
CCSTLGAAWGSPCEPCEIDTACSRGFARMKGLVCEDINECEVFPGVCTNGRCVNTQGSFR
CECAAGLTLDSSGRTCVDMRSEQCYKKWHEDECGEPLPGRYRVDMCCCSVGAAWGIDCEE
CPKEGTSEFNTICPRGRGFANRGDILTGRSFYKDVNECKVFQGLCTYGTCRNTIGSFKCR
CNSGFALTAEERNCTDIDECRISPDLCGHGTCVNTPGSFECECFEGYESGFMMMKNCMDI
DECERNPLLCHGGTCLNTEGSFECECPAGYVLSNDASVCEDMNECQLSDNLCRNGQCVNM
PGTYQCSCNTGYQATPDRQGCVDIDECTIMNGGCETHCTNSEGSYECSCSEGYALMPDLR
TCSDIDECEETPEVCDGGQCTNIPGEYRCLCFDGFMASMDMRTCIDVNECDLNPNICLHG
DCENTKGSFICHCQLGYFVKKGSTGCTDIDECEIGAHNCDIHSACINVPGSFKCRCRDGW
VGDGIKCVDYDECASEDHSCHLNADCVNTPGSHRCTCKEGFNGDGFSCSDMDECADNVNL
CENGQCLNAPGGYRCECEMGFTPTEDSKACKDIDECNFQNICVFGTCENLPGMFRCVCDD
GYELDRSGGNCTDINECAVHVNCLNGLCVNIPGSYICNCPPDFTLNPTGVGCVDTRVGNC
FLDILPRGDGGISCSVEIGVGVTRASCCCSDGRAWGNPCELCPTSNSSEYKTLCPGGEGF
RPNPITVLLEDIDECMELPGLCQGGNCINTFGSFQCECPPGYYLNEETRICEDIDECTAH
IGICGPGTCYNTLGNYTCVCPPEYMQVNGGNNCMDMRKSVCYRNFNDTCENELSFNMTKK
MCCCAYNVGKAWNKPCEPCPTPATNAYRTLCGNLAPGFIIDIHTGKPVDIDECREIPGIC
ANGVCINQIGSFRCECPMGFSYNNILLICEDIDECNSGDNLCQRNANCINIPGSYRCECS
QGFKLSPSGACLDRNECQEIPNACSHGQCIDTQGSYRCLCHNGFKATADQTMCMDIDECE
RQPCGNGTCKNTVGSYNCLCFPGFELTHNNDCMDVDECFALQGQVCRNGQCINGLGSFQC
LCYEGYENTPDGKNCIDINECTSLPGTCSPGTCQNLDGSFRCICAAGYQVQNDQCLDINE
CEVEPNLCQFGTCTNTPGSFQCSCQPGFVLSDNKRRCYDTRESFCFTKFEAGKCSVPKAF
NTTKAKCCCSKMPGEGWGIPCELCPRETDAAFNTLCPYGLGALPGLGDTREDMNECLDNP
GICQNGICINTDGSFRCECPFGYNLDYTGVNCVDTDECSIGNPCGNGTCTNVVGGFECSC
QEGFEPGPMMTCEDINECSQNPLLCAFRCVNTFGSYECMCPAGYVLRDDQRMCRDQDECS
EGLDDCDSKGMTCKNLIGTFMCICPPGMQRRPDGEGCMDLNECRAKPGICKNGRCINTVG
SYRCECNDGFEPSSTGTECIDNRKGFCFTEVLQTMCQQSSTNRNTVTKSECCCNAGRGWG
SQCELCPLPGTVQYKKMCPLGPGYTTDGRDINECQVLPDLCKNGQCINSIGSFRCHCNVG
YKADFTSTSCVDVDECSLSPKPCNFLCKNTEGSYLCSCPRGYNLQPDGKTCKDLDECSTK
QHNCQFLCVNTIGGFNCKCPNGFTQHQTACIDNNECTGQNSVCGSRASCVNTPGSFNCEC
SKGFSLDSTGIECEDVDECNNNHRCQHGCQNMLGGYRCGCPQGYVQHYQWNQCVDENECQ
SGTVCGSASCYNTLGSFKCVCPSGFDFEQNAGGCQDVNECSTGTSPCIYGCSNTDGGYLC
GCPGGFFRAGQGHCVSGSGFPGQLVDGDEDDSLSPEACYECKINGGGKNGRHRRSTDENE
LNQEPVVSMASVDTQASIPMNLSLTSLLNKEPLLELLPALEPLEHHVRYIITHGNTDEHF
RLVERRDGKSVLRLGKRPPQPGSYRLEITSLPLYGPRRLHQLEEQHDYDYLQGEIGDALR
IKLHIHLH
NT seq
8667 nt
NT seq
+upstream
nt +downstream
nt
atgggatcagggaagctggctcagatgctgctgggatgggcggcagtgtgtctcagcgcc
atgcaggtgacctgtgctcaaactggaagtggaccttatcaagctaaccgcttcaccggg
agcgtggaccagagggaagcacagcgagtccggcgccgtgggcaggacaccttgaaagga
cccaatgtgtgtggctctcgcttccattcgtactgctgcccaggctggaagacgctctcg
ggaggcaaccagtgtattgttccaatttgcaggaactcatgtggcgatgggttctgctcc
agacccaacatgtgcacctgttccaacggccagctctctcccagctgtggaggtggagga
gttcaatcctgtaatatcaggtgtatgaatggaggcagctgcatggaggattcctgctcc
tgtgcaaagggatacactgggaaccactgtggacagcctgtgtgtgacagcggctgccag
aatggtggacgctgcatcgggcccaacagatgtgcctgcgtctacggtttcaccggtcct
cagtgtgagagagactacaggacaggaccatgtttcacccaggtgagcaaccagatgtgc
cagggtcagctcagtggaatcgtctgcaccaaaactctttgctgcgccacaattggccga
gcatggggccacccctgtgagcagtgccccgcccagccgcacccctgcagacgaggcttc
atccccaacatccgcaccggggcctgccaagatgtggacgagtgccaggcagtgccaggt
ctgtgttctggaggcaactgtatcaacactgtcggatcatacgaatgtaaatgccccgct
ggtcaccgtcaaagtgaaaccagtcacaaatgtgaagatattgatgagtgcagcaccatt
cctggagtgtgtgatggaggagagtgcaccaacactgctggtagctacgtctgcacctgt
ccacgaggctacatctccagcacagatggctccagatgtgtggatcagcgtgtgggcacc
tgtttctctgctcttgctaatggtcgctgtgctgctgagctgaatggccagtacacgaaa
atgcaatgctgctgtgaaacaggacgctgctgggctttgggccagatcccagagatgtgt
cctgtcagagggtccgatgagttcaggcgtctgtgtattgtgggtgtcccacaaggactc
cctcacaccttccccaacggatacttccccagcaacaacggaaactatggattcaagctc
cccagtataccaaacggtaacgggaatggaaggccacataccaatggcggaggggacagc
tttggagaaaatggagggacttttgggggcaatggagggacatttggagggaatggagga
ggcctgaatcacctgaacataggcactgtttctgtgaatgaaagccttgacttttgccaa
cattttacccacctgtgtttaaatggacgatgcatcccaacacgtgggagctatcgctgc
gagtgtaacatgggatacaagcaggatgtccgcggggagtgcattgatgtggatgagtgt
ttgaataacccatgtatcaatggcgattgtgtcaacacacctggggcgtaccactgcaaa
tgtcacgaaggataccaggggacccctaccaaacaggcctgcattgatattgatgagtgt
atcgtgaatggagtgatgtgtcgtaacggccgctgcgtcaacacagagggcagcttccag
tgtatctgcaatgctggctttgagcttactccggatgggaagaactgcattgatcacgat
gagtgcgccactaccaacatgtgtctcaatggcatgtgcatcaacgaggacggcagcttt
aaatgcatctgcaagccgggcttcactttagcacccagtggccggtattgcatcgacacc
gatgagtgtctcacacctggcatctgcatgaacggccgctgcatcaacagcgagggctcc
ttccgctgcgagtgtccaccgggtctggccgttgatgttgatggaagagtgtgtgtagac
acacacatgaggaccacctgctacggcaccataaaaatgggaacgtgctcacgtccgttt
ccaggagcagtgaccaagtccgagtgctgctgtgctaaccctgagcatggctttggagag
ccctgccaaccctgcccatccagaaactcagctgagttccaggctgtatgcagcggtggt
attggtatcacaactgatggaagagacatcaatgagtgtgccttggacccagaaatctgc
cagaatggcatgtgtgagaacctcagaggaagttaccgctgcatttgcaacattggctac
gagtctgacacgagtggaaagaactgcgccgatatcaacgaatgtctggtgaaccgactg
ctctgtgacaatggactgtgcagaaacaccccgggctcctacacgtgctcctgtcccaaa
gggttcgtcttcaaacccgactctgagacatgcgaggatatcaatgagtgtgattccagc
ccatgcatcaacggactatgtcgcaatgtggccggttcctttaactgcgagtgcgcccat
ggcagcaagttggactccacgaataccatctgcgttgacagcatgaagagcacttgctgg
ctcactatacaagacaaccgctgtgaggtgaacatcaacggagccacgctgaagtctgag
tgctgctccacgctgggagccgcctggggcagcccttgcgaaccctgcgagatcgacacg
gcttgctctcgaggatttgctcgcatgaagggcctcgtctgtgaagacatcaatgagtgt
gaagtgttccctggagtgtgtaccaatgggcggtgtgtgaacacccagggatcgttccgc
tgcgaatgcgctgcaggcctgactttggacagcagtggtcgcacatgtgtggacatgcgc
agtgagcagtgctataagaaatggcacgaggatgagtgcggtgagcctcttccaggaagg
taccgtgtggacatgtgctgctgctctgtgggtgctgcttgggggatcgattgtgaggag
tgtcctaaagaaggaacatctgagttcaataccatctgtcccagaggtcgcggctttgca
aacagaggagatattctcaccggcaggtccttctataaagatgtgaatgaatgtaaggtc
ttccagggtctgtgtacttatggaacctgcagaaacacaatcggcagtttcaaatgtcgg
tgcaacagcggttttgctctcacagccgaggagagaaactgcacagatatcgatgagtgt
cgaatctcccctgacctctgtggccacggtacgtgtgtcaacacacccggcagctttgag
tgtgaatgcttcgaaggctacgaaagtggcttcatgatgatgaaaaactgcatggacatt
gatgaatgtgagagaaaccccttgctgtgccatggaggaacctgcctgaacacagaggga
agttttgagtgtgaatgtcctgcaggatatgtgctcagcaacgatgcatctgtctgcgaa
gatatgaatgaatgccagctgagtgacaacttgtgcagaaacggacagtgtgtcaacatg
cccgggacctaccagtgctcctgtaacaccgggtaccaggccacacctgacagacagggc
tgcgtcgatattgacgagtgcaccatcatgaacggaggttgtgagactcactgtaccaac
tctgagggcagctatgagtgtagctgtagtgagggctatgctctgatgcctgacctcagg
acttgttcagatattgatgagtgtgaagagactccagaagtctgtgatggaggccagtgc
accaatattcctggggaatatcgttgtctgtgttttgatggatttatggcttccatggac
atgaggacctgtatcgatgtgaacgaatgtgatttgaacccaaacatctgtctccacggt
gactgtgagaacaccaaaggctcgttcatctgccactgtcagctgggatactttgtcaag
aagggatccacaggctgcacagatattgatgagtgtgagattggagctcacaactgtgac
atccactctgcttgcattaatgtgccggggagctttaagtgtcgctgtagagatggctgg
gtgggagacggcatcaagtgtgtggattatgatgaatgtgcctcagaggaccacagttgc
cacctcaatgcagattgcgtcaacacaccagggtcacataggtgtacatgcaaagaaggc
tttaatggagacggcttttcatgctcagacatggatgaatgcgcagacaacgtcaacctg
tgtgagaacgggcagtgtctgaacgctcctggaggctaccgctgcgagtgcgagatgggc
ttcacgcccactgaggacagcaaggcctgtaaagatattgatgagtgtaatttccagaac
atctgtgtgtttggaacctgtgagaaccttccaggcatgttccggtgtgtttgtgacgat
ggctacgaactggaccgcagtggaggaaactgcactgatatcaacgaatgtgctgtccat
gtgaactgtctcaacggactctgtgtgaacataccagggagctacatatgtaactgtcca
cctgattttacactcaaccccactggcgtgggctgtgtggatacccgtgttggtaactgt
ttcttggacatccttcctcggggtgacggaggaatctcctgcagtgtggagatcggtgtg
ggtgttacacgagcttcctgctgctgctccgatggaagagcttggggaaacccttgtgaa
ctttgcccaacatccaactcctccgaatacaagacactctgtccaggaggggagggcttc
agaccgaatcccatcactgttcttctggaagacattgatgagtgcatggagttaccgggt
ctctgccagggtgggaactgcattaacacatttggtagcttccagtgtgagtgtccgcca
ggctactacctgaatgaagagactcgcatctgtgaagatattgatgaatgcactgctcat
attgggatctgtgggcctggaacttgctacaatacattgggcaactacacttgtgtgtgc
ccccctgaatacatgcaggtcaatggaggaaacaactgcatggacatgaggaaaagtgtt
tgctaccgcaacttcaatgacacgtgtgagaatgagctgtcattcaacatgaccaagaag
atgtgctgctgcgcctacaatgtgggcaaagcctggaacaagccgtgcgagccgtgtcct
actcctgctaccaatgcgtaccggacactgtgcggtaacctggctcctggcttcatcatt
gacatccacaccggcaaaccagttgatattgatgagtgcagagaaatcccgggtatttgt
gctaacggagtgtgcatcaaccagattggaagcttccgctgtgaatgtccaatgggcttc
agctacaacaacatactactgatttgtgaagatattgatgagtgcaacagtggtgacaac
ctgtgccagcgcaacgcaaactgcatcaacatcccaggcagctaccgctgcgagtgctcc
cagggcttcaaactgtcccccagcggggcctgtctggatcgcaatgagtgccaggagatt
cctaacgcttgcagccatggacagtgtatcgacacgcagggcagttatcgctgcctctgc
cacaatggcttcaaggccactgctgatcaaaccatgtgcatggacattgatgaatgtgaa
aggcagccgtgcggcaatggtacctgtaaaaacacggtgggatcgtacaactgcctctgc
tttcctggatttgagctcacacataacaatgactgcatggacgtagatgagtgctttgct
ctgcagggccaagtgtgcaggaatggacaatgcatcaatgggcttggttcctttcaatgt
ctatgctatgaaggttacgaaaacacccctgatggaaagaattgcattgatatcaatgag
tgtactagtctgcctggaacatgctctccgggaacctgccagaacctggatggatctttc
agatgtatttgcgctgcaggttaccaggtgcaaaatgaccagtgtttagatattaatgaa
tgtgaagtagagcccaacctctgccagttcggcacctgcaccaacaccccaggcagcttc
cagtgctcttgccagccgggcttcgtactctctgacaacaaacggcgttgctacgacacc
agagagagcttctgtttcaccaagtttgaggcgggcaaatgctcagtccctaaagcattc
aacaccactaaggccaagtgctgctgcagcaagatgcctggagagggctggggaattccc
tgtgagctgtgcccacgagaaactgatgctgctttcaacactctatgcccctacggcctt
ggagctctgcctggactgggtgacactcgagaggatatgaacgagtgtctggataatcct
ggaatttgccagaatggaatatgcatcaacacagatggctctttccgatgcgaatgcccc
tttggatacaacctggattacactggagtcaactgtgttgacacggatgaatgctccatt
gggaacccttgtggaaacggaacctgcaccaatgtagtgggaggctttgagtgttcgtgc
caggagggctttgaaccgggacccatgatgacttgtgaagacattaacgagtgctcccag
aatccccttctttgtgctttccgttgtgtcaacacatttgggtcctacgagtgcatgtgt
cctgccggctatgtgctgcgagatgaccagcgcatgtgcagagatcaggatgagtgttca
gagggactagatgactgcgactctaaaggcatgacctgcaagaacctgattggaaccttc
atgtgtatctgccctcctggcatgcagcggcgaccagatggagagggatgcatggacttg
aacgagtgtcgtgccaaacctggaatctgcaagaacggtcgctgcatcaacacggtggga
agctatcgctgcgagtgtaacgacggatttgagccgagctcaactggaactgaatgcatt
gacaacagaaagggcttctgtttcacagaggtcctgcagactatgtgccagcaatcgtca
accaacaggaacactgtgactaagtctgagtgctgctgcaatgcgggtcgaggctggggg
tcacagtgtgagttgtgccctctacctggcactgtgcaatacaagaagatgtgccctctt
ggacctggatacaccacagatggtagagatatcaatgaatgccaggtgttgccagatctg
tgcaagaacggtcagtgcatcaactctataggatccttccgctgccactgtaatgtaggg
tacaaagctgacttcaccagcacttcctgtgtcgatgtggatgaatgctccttgtctcca
aaaccctgtaacttcctgtgtaaaaacactgaaggcagctacctgtgctcctgccccaga
ggatacaacctacaaccagatggaaagacctgcaaagatctggatgagtgctcaacaaag
cagcacaactgccagttcctctgtgttaacaccatcggaggcttcaactgcaagtgtcca
aatggcttcactcagcatcagaccgcctgcattgacaacaatgagtgcacaggccaaaac
agtgtctgtggttctcgagcttcctgtgtaaacactcctggtagcttcaactgtgaatgc
tctaaaggtttctccctggatagcactggcatagagtgtgaagatgtggatgagtgtaac
aataaccatcgctgtcagcatggctgtcagaacatgctaggaggttaccgctgtggctgt
cctcagggatacgtgcagcactaccagtggaaccagtgtgtggatgaaaacgagtgtcag
agcgggactgtttgtggctccgcttcctgctacaacaccctgggcagcttcaagtgcgtc
tgtccttctggttttgactttgagcagaatgctggtggctgccaggatgtgaatgaatgt
agcacaggcacaagcccctgcatctacggctgctccaacactgacggaggctacttgtgt
ggctgtcctggaggtttcttcagagctggacagggtcactgtgtttcaggctcaggcttc
ccaggccaactcgtggatggtgatgaggatgacagtctgtctcctgaagcttgctatgag
tgcaagatcaatggaggaggaaagaatggacgacacaggcgcagtaccgatgaaaatgaa
ctgaatcaggaaccagttgtgagcatggccagtgtggacacacaggcctccatccccatg
aacctctcactgacctcactgctcaataaggagcctctgcttgagctcctccccgccctc
gagccactggagcatcatgtacgttacatcataacccatggcaacaccgacgaacacttc
cgccttgtggagcgccgggacggaaagagcgtgctccggcttgggaagagaccgcctcag
cctgggtcctaccggctggagatcaccagcctgcctctgtatggaccccgcagactacat
cagctggaggagcagcacgactatgactacctacagggggagataggggacgctctgcgg
atcaagctccacattcacctgcactga
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