Xiphophorus hellerii (green swordtail): 116725739 Help Entry 116725739         CDS       T07363                                  Symbol patj Name (RefSeq) inaD-like protein isoform X1   KO K06092   InaD-like protein Organism xhe  Xiphophorus hellerii (green swordtail) Pathway xhe04530   Tight junction Brite KEGG Orthology (KO) [BR:xhe00001]  09140 Cellular Processes   09144 Cellular community - eukaryotes    04530 Tight junction     116725739 (patj) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  PDZ PDZ_6 PDZ_2 L27_2 Motif Other DBs NCBI-GeneID:  116725739 NCBI-ProteinID:  XP_032427963 LinkDB All DBs Position 9:complement(32230377..32280204) Genome browser AA seq 1873 aa AA seqDB search MLDNVPVVSSAERQQVLAALDRLQNRLVQREEWSLSAALGSLKGALQSPLFGRVLTLQHS VRQLQQQIDSLPPDARSDFSFSRRGQLIMSSAPSSVLTNGSSPLSLQAPPPTERLQQWIQ EAAKGRRIEPIVLTRPASGGLGFSVVGLNPAGSGGHGVFVKHIQPGGIADRDGRLQEQDQ ILVINGSRLEPGRNHQAVLSLLQQPGETVELVVARDRVAPGVPAEGPVGTDLWGHVEEIQ LSNDGSGLGFGIVGGKTSGVVVRTLIPDSVADRDGRLRTGDHILRIGSTPTNGLTSDQVV KVLQACGGHVTMLIARDPRGQATAAPAAPPDSAPFVNVPPPLPDSAPVTSLPPGSPVLPP QRRPSKTPNLEGYEIHEVPLTKKNGQSLGISIIGFNPMTSQDAVGVFVKHVVPGSAADQS GNIRVHDRLLALDNVSLHGMTNQEVLEVMKQTGQTVVLTLVRKKAQGPERSLDNVERAST RGSQRRNLEVKGRLSASGSIVMMKQEVTYPNVAQLNRASDAELRAKWEAALGPQYLVLVV NLDPVIQDDAELQKSSKLLPIHILRLGVELDSFDGHHYVSSVAPGGPVDRHGVLRPEDEL LEVNGVQLYGKSRREAVSFLKEVPPPFTLVCCRLLIPDQEPEPEPEPEPSVPPQPAAEHR SIEEMEMKLSSMLRREEEEEEEEQQQGSPVEELTRSEDSSLEEEEEDEGELALWGPEVSE VELQKETDRGLGFSLLDYQDPLDPGRCVMVIRSLVPGGSAERHGGLLPGDQLVSVNHTQL DLLTLTEAVEVLKSVPPGTVRLGICKPLVEAADPSRENMIQDSAGGDQLPEGPSENSELP DDSCQEEPELILDGGLPRYTSSLTSDLLPAEEGLEMAVDEEEDEEERSSLPRKPPPSWED WTLWSAGRAGGPQELQVRRDSQDDEELQKSDLESISSVGKLILGLPDSRDGEAESDLTLT DTDTESVRMVAAGSRKRRSQGRRNLPEREEGEGEETPAFSHWGAPRRVEVWPEDGQSLGL SIVGGRHVIKRLKNGEELKGIFIKQVLAGSPAARTRCLKTGDKILEVSGVDLQAASHEEA VSVIKSAPSPVVFIVQSLSATPRPVSLTASSYSKHKAKRTDPLVPEAALPPLREPPPYRP PSQSEQELTAHLQKVKERCCERYGDLQGELLCVDLEKDRQGLGLSLAGNRNRSRLSIFVV GLHPGGPASRDGRIRVGDELLEINNQILYGRSHQNASAIIKTAAAKVKLILLRNNDAVNQ MAVSPLTAPAAAPPAAPPAAPPPAAPPTPVGLEVGGSAPPERLCPSPDLPVRTDPCSAEQ DQNPTSGFVRSDDAPERPEVETQRTVQRSSASFGRSQRLSDAADSDPQAARAPLELQSRS SSRQTAASPPLVGAEVQSASRGTAHDSGPPSSDPSGCAVVPGQETVLEICKGRSGLGLSI VGGTDTQLNAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRGASHEEAIAALRQTPAK VRLTVLRDETRFRDEENLDRFRVELQKKSGRGLGFSIVGKRSGSGVFISEVVRGGAAELD GRLMQGDQILSVDGEDTRRVSQEGVAAMLKCARGPVQLELGRLKAASWMCSRLTTGGSQM SDISSSGVEAPPPPPASPDPPMTPEEISAKTSSDITSCSESSSGVRTVQITRGSGDSLGV SVAGGQGSPLGDVPVFIAMIRANGVAAKTHRLKVGDRIVSVGGQPVDGLSHSEVVAMLKN SYGNINLQVVADTNISAIATQVESLSGSCSLTASSDTHTPSESEGPRSRSITLEKGCEGL GFSIVGGFGSPHGDLPIYVKTVFSKGAAAVDGRLKRGDQILSVNGESLQAVTHEQAVTIL KKQRGTVTLDVLS NT seq 5622 nt NT seq  +upstreamnt  +downstreamnt atgttggacaacgtccccgtagtgtcgtcggcggagcgccagcaggttctggctgctctg gaccggctccagaaccggctggtccagagggaggagtggagcctgagcgccgccctgggc agcctgaagggggcgctgcagagcccgctgttcggccgcgtcctgacgctgcagcactcc gttcgccagctgcagcagcagatcgacagcttgcctcctgacgctcgcagtgacttcagt ttctccagacgcggtcagctgattatgagctccgccccctcctccgtcctgaccaatggc tcgtcgcctctctcccttcaggctccgcccccgacggagcgcctgcagcagtggatccag gaggctgcgaagggccgccggatcgagccgatcgttctgacccggcccgcttcagggggc ctggggttcagcgtggtcgggctgaacccggcaggaagcggcggccacggcgtgttcgtc aaacacatccagccgggaggaatcgccgaccgggacgggcgtcttcaggagcaggaccag atcctggtgatcaacggcagtcgtctggaaccgggccggaaccaccaggcggtcctgagc ttgctgcagcagccaggcgagaccgtggagctagtggtggcccgggaccgggtcgcacca ggagttccagctgaagggccggtcggcacggacctctggggtcatgtggaggagatccag ctctccaatgatggatccggtttgggctttgggattgttggcgggaagacgagcggagtg gtcgtccgaactctgatccccgacagcgtagccgacagggacgggcgcctccgcacaggt gaccacatcctccgcatcgggtcgacgcccaccaacggcctcaccagcgaccaggtcgtc aaggttctgcaagcctgcggcggtcatgtgaccatgctgatcgccagggacccccgagga caggcgaccgccgccccggctgcgcctcctgactccgcccccttcgttaatgtacctcct ccacttcctgactccgcccccgttacgtccttacctccaggttctcctgtactcccgccg cagcgccggcccagcaagacgcccaacctggagggatacgagattcatgaagttcctctc accaagaagaacggccagagcctcggcatctccatcatcggcttcaatccaatgaccagc caagatgcagtgggtgtgtttgtgaaacacgtggttcctggcagcgccgcggaccagagc ggaaacatccgggtccatgaccgcctcctggctctggacaacgtcagtctccatggaatg accaaccaggaggttctggaggtgatgaagcagacgggtcagactgtggttctgactctg gtccggaagaaagcccaaggcccggaaagatccctggataatgtggagcgggcctcgacc agggggtctcagaggaggaacctggaggtcaaaggtcgtttgtcagcatctggatccatc gtgatgatgaaacaggaagtgacatatcccaacgtggcccaactgaacagagcgtctgat gcagaactacgggccaagtgggaggcggctctgggacctcagtacctcgtcctggtggtg aacctggatcccgtgatccaagacgatgcagagctgcagaaatcctccaagctgctgccc attcacatcctgcgtctgggcgtggagctggactccttcgacggccaccactacgtctcc tctgtggcccctgggggccccgtggacagacacggcgtgctgaggcctgaggatgaactg ctggaggtcaacggcgtccagctgtacgggaagtcccggcgggaagccgtgtccttcctc aaagaggttccccctccgttcactctggtttgctgccgactcctgatcccagaccaggaa ccggaaccagaaccagaaccagaaccgtccgttccaccacaaccagcagcagaacatcgg agcatcgaagagatggagatgaagctgtcgtcgatgctgcgcagagaggaagaggaggaa gaggaggagcagcagcagggttctcctgtggaggagctgacgaggagcgaggactccagc ctggaggaagaggaggaggatgaaggcgagctggccctgtggggtccggaggtcagcgag gtggagctgcagaaggagacggaccgaggcctgggcttcagcctgctggactaccaggac ccgttggatcctggtcgctgtgtgatggtgatccgctctctggttcctggtgggtccgcg gagcgtcatggaggtctgcttcctggagaccagctggtatcagttaatcacacccagttg gaccttctcaccctgaccgaggcagtggaggtgctgaagtcggtaccacctggtaccgtc cgcctgggaatctgcaaacccctggtggaagcagccgatcccagcagagagaacatgatc caagattctgctggaggcgaccagcttccagagggtcccagtgaaaactcggagcttcca gatgattcctgtcaggaggaaccggagctgatcctggacggaggtctgcctcgctacacc tcctctctgacctctgacctcctgccagcggaggagggcctggagatggctgtggatgaa gaggaggatgaagaggagaggagctcgctgcccaggaagcctcctccatcctgggaggac tggacgctgtggtctgctggccgagcaggaggtccacaggagctgcaggtgaggagagac tctcaggatgacgaagagctgcagaagtccgacctggagagcatctcatctgttgggaaa ctgatcctgggtctgcccgactccagggacggcgaggccgagtccgatctcactctgact gacaccgacaccgagtccgtcaggatggtcgccgccggcagcaggaagaggcggagccaa ggccgcagaaacctgccggagagggaggagggggagggggaggagacgcctgccttcagc cactggggggcgccacgcagagtggaggtgtggcctgaggacggccagtctctgggcctc agcatcgtgggcgggcgccacgtcatcaagcgtctgaagaacggcgaggagctgaaggga atcttcatcaagcaggttctggctggcagcccggccgcccggacccgctgcctgaagacc ggagacaagatcctggaggtgtccggtgtggacctgcaagcggcgagtcatgaggaggcg gtgagcgtcatcaagtccgctccgagtccggtcgtcttcatcgtccagagcctgtcggcg acgccgcggccggtgtcgctaacagcttccagctacagcaaacacaaagccaagcggacc gatcctctggtacctgaggcagccctgccccccctcagagagcccccaccctacagacct cccagccaatcagagcaggagctgactgctcacctgcagaaggtcaaagagcgctgctgt gagcgttatggcgacctgcagggggagctgctgtgtgtggacctggagaaggaccggcag ggtttgggtctcagcctggcgggaaaccggaaccggtccaggctcagtatcttcgtggtg ggtctccatcccggtgggccggcctccagagacggacggatccgtgtgggagacgagctg ctggagatcaacaaccagatcctgtatgggcggagccaccagaacgcgtcggccatcatt aagaccgccgccgccaaggtgaagctcatcctgctcagaaacaacgacgctgtaaaccag atggccgtttctcctttaacggctcctgctgctgctcctcctgctgctcctcctgctgct cctcctcctgctgctcctcccaccccggttggcttggaggtcggaggctccgccccccct gagcggctctgcccctcaccggacctgccggtcagaaccgacccatgttctgctgaacag gaccagaacccgaccagcgggtttgttcggagcgacgacgcccccgagaggccagaggtg gagacgcagaggacggtccagagaagctccgcctccttcggccgctcccagaggctcagc gacgccgcagacagcgatccccaggctgccagggcgccgctggagctccagtccaggagc tccagccgacagacggcagcttctcctcctctggtcggcgccgaggtccagtctgctagt cgaggtaccgcccacgattctgggccaccctcgtcggacccgtctggctgcgccgtggtt ccgggtcaggaaacggttctggagatctgcaagggtcggtccggacttgggctcagcatc gtgggaggaaccgacacccagctgaacgccatcgtgatccatgaggtgtacgaggaagga gcggcggcccgggacggacggctctgggccggagaccagatcctggaggtgaacggcgtg gatctgcgcggggcgtcccatgaggaggccatcgccgccctgcgtcagacgccggcgaag gtccggctgacggttctgagggacgaaacccggttccgggacgaggagaacctggaccgg ttccgggtggagctgcagaagaagagcggcagaggactgggcttcagcatcgtcggcaag aggagcggcagcggcgtgttcatctcggaggtggtcagagggggcgccgctgagctggat ggacggctgatgcagggagaccagatcctgtcggtggacggagaggacacgagacgcgtg tcccaggagggcgtggccgccatgctgaagtgtgcccgtggacccgtccagctggagctc ggccgcctgaaagccgcttcctggatgtgctccagactgaccaccggggggagccagatg agcgacatcagcagctcaggtgttgaggctccgccccccccacctgcctcacctgacccc ccgatgacacctgaggaaatcagcgccaagaccagcagtgacatcacttcctgctccgag agcagctcaggcgtccggacggtgcagatcaccaggggcagcggcgactccctgggggtg agcgtggcgggggggcagggcagcccgctgggggacgtccccgtcttcatcgccatgatc cgggccaacggcgtcgccgccaagacgcaccggctgaaggtgggggaccggatcgtcagc gtggggggacagccggtggacggactgtcccacagcgaggtggtggccatgctgaagaac agctacgggaacatcaacctgcaggtggtggccgacaccaacatcagcgccatcgctact caggtggagagtctgagcggcagctgcagtctgacggcgagcagcgacacacacacaccg tctgagtcagagggtcctcggtcccgcagcatcactctggagaaaggctgtgagggtttg ggcttcagcatcgtcggcggtttcggcagtccgcacggagaccttcccatctacgtgaag accgtcttcagtaagggcgcggcggcggtggacgggcgtctgaagcgtggcgatcagatt ctgtcggtgaacggcgagagtctgcaggcggtgacccatgagcaagcagtgaccatcctg aagaagcagagggggacggtcaccctggatgtcctgtcctga

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