Xiphophorus hellerii (green swordtail): 116725834
Help
Entry
116725834 CDS
T07363
Name
(RefSeq) LOW QUALITY PROTEIN: neural cell adhesion molecule L1-like protein
KO
K06758
L1 cell adhesion molecule like protein
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xhe04515
]
116725834
Cell adhesion molecules [BR:
xhe04515
]
Immunoglobulin superfamily
L1 family
116725834
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
Bravo_FIGEY
Ig_5
V-set
C2-set_2
Ig_4
Ig_6
C2-set_3
Fn3-III_PB4
Motif
Other DBs
NCBI-GeneID:
116725834
NCBI-ProteinID:
XP_032428103
LinkDB
All DBs
Position
1:complement(12619260..12659835)
Genome browser
AA seq
1168 aa
AA seq
DB search
MRRPGDLLLVLLWTFTSRARSLNVPFEVEQPPTITNHTAGPIIALPFDNTLTIRCEARGN
PPPAYTWTKDGQELNLPNIPTVKTDNRNGTFMFHNKHFAQFRGKYRCFASNKLGTAMTEE
IEIVLSTSPKFPKETFDTIVVKEGYPITLHCNPPEGVAPRQIYWMTHSLQHIKQDERVSM
GTDGNLYFAYALPQDSRKDYGCVAAFQRIRTIVQKTPLSVKVERLEPQNNSSESVSATLP
VRAPSLLLPSGVQTEKLLLKGQDLNLECIPAGYPTPKITWMKMGETLTDRIKLDNFKKLL
TISAVDEKDQGKYMCMAENSAGKADHYFDVIVEEPPSWRTKPPQNQLSVIGSDVFIKCSV
DGKPTPVITWRKNGKILQDDRENNRRVLDETVMLHKAGPEDSGVYQCEASNPHGSVLANI
NVLVMNMAPLMLTKDFQEYAVIEGGDIVINCSVFSSPPSSISWTKEGTVVEGERFHVLEN
GQFLKIVRSEKGDTGKYACMASNREGMSNLTALLDVKDPTKIVAPPQDVQISSGKLARLM
CRSEYDRSLQGTFEVIWRKDGEEIFRSSENSFRYNMEGDHLQIRDLNMSDQGRYTCIART
SLDEDTATAFLTVLDTPDAPMSLKISDQESRNVTLSWIPGSDHNSSVREFVVEYEESHWE
PGRWKELQKVAGNQATAELFLHGDLNYQFRVYAVNAIGPGPPSEPTERLKTPPAAPDRNP
ENIRIHGHFPHEMDISWDPLLPIEFNGPGLEYKISYRKLEVEDKWQEHLVTRSSFIVRNT
STFAPYEIKIQSRNSLGWGPEPRPITGYSGEDIVFWHCLQENVSVPTAAPHNVAVEVINT
TVLRVSWSPVLPATVRGHLGGYNVNWERMKSFLSPDKILEEHNSKSFPGNRTHVIVPGFE
PFSEYRLTVNVFNKKGKGPKSDPVNFYTPEGVPEKVPVLIPRIQDDDTVLLEWGPPSVTN
GILTGYLLKYHLLNKTSLEVIDSFELNLTLPDVTQHHIVRSDRGNLFRFYLSACTRAGCG
PAELAENHSPPAEKVGTEASTSTLRWFIGTLCAVALLTLLAVIVCFVMKTKGGKYAVKEK
EDLFPDAESQAMNDDAYEYSGSDEKRLKKPILGSTDDTVEDRISRDSLADYSDGDGEFSE
DGSFIGEYAGARYRDSISEPSGPSTATA
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggccaggcgacctgctactcgttctgctttggacctttacatccagagccaga
agccttaatgttcctttcgaagtggagcaacctccaactataaccaaccatacagcaggt
cccattattgctcttccttttgacaatacactgactataagatgtgaagccaggggtaac
ccaccaccagcatacacatggacaaaggatggccaggagctaaaccttccaaacatccca
acagtcaaaacagacaacagaaatgggacattcatgtttcacaacaagcactttgcccag
ttcaggggtaaatacagatgctttgcttccaataagctgggaactgccatgacggaggag
attgaaatcgtactttccacttcacccaagttcccaaaggaaacatttgataccattgtc
gttaaggagggctatccaattactcttcactgtaaccctccagaaggtgtggccccacgt
cagatctactggatgactcacagtctgcagcacataaagcaggatgagagggtctccatg
ggaaccgatggcaacctgtactttgcttatgccttaccacaagacagtcgcaaggattac
ggctgtgtcgctgccttccaaaggatacgtactattgtccagaaaacccccttgtccgtc
aaggtggagagattggaaccgcagaacaactcttctgagagtgtcagtgccacgctacca
gttcgagcacccagcctactgctgccctctggtgtccaaacagagaagctgttgctgaaa
ggacaggatctgaatcttgagtgtataccagccggatatcccactcctaaaataacatgg
atgaaaatgggagaaactctaactgatcggataaaactggataactttaagaagctgttg
accatcagtgctgtggatgagaaggatcaggggaaatacatgtgtatggctgaaaattca
gccggaaaggcagaccattactttgatgtgattgtagaagagccaccatcatggcgtaca
aagcctccccagaaccagctgtctgtgatcgggtcagacgttttcattaagtgctcagtg
gatggaaaaccaaccccagtgataacgtggagaaaaaatggaaaaatactccaagatgac
agagagaacaacagacgagtgcttgatgaaactgtgatgcttcacaaggctgggccagag
gacagtggcgtctaccagtgcgaggcctccaatcctcatggcagtgttcttgccaacatt
aatgtcttagtcatgaatatggcacctcttatgctgacaaaggacttccaagagtatgca
gtgatagaaggaggggacattgtcataaactgcagtgttttcagctctcctccatccagt
atctcttggaccaaggaggggacagttgttgaaggagaacgatttcatgttttagaaaat
gggcaattcttgaaaatcgtccgttcagaaaaaggtgacacggggaaatatgcttgcatg
gctagtaacagagaaggcatgtcaaatctcacagctctgctggatgtgaaagacccaaca
aaaattgtggctcctcctcaggatgtgcagatcagcagtgggaagttggctcgattgatg
tgccggtcagaatatgacagaagtctgcagggcacctttgaggtgatctggaggaaggat
ggggaggagatctttcgctcttctgagaatagtttcaggtacaatatggaaggtgaccac
ttgcagattagggacttgaatatgagtgatcaggggaggtatacatgcattgctcgaaca
agtcttgatgaggatactgcaactgcctttctaactgtactggatactcctgatgctcct
atgagtttaaagatatcagatcaggaatcaagaaatgtaactctgtcctggataccaggg
agtgatcacaacagctccgtgagagaattcgtggtggagtatgaggagagccactgggag
cctggaaggtggaaggagctgcagaaagtcgccggtaaccaggcaacggctgagctcttt
cttcatggagaccttaactatcagttcagagtttatgctgttaatgccattggacctgga
ccacctagtgagcccacggagagactcaaaacaccccctgctgcaccagacagaaacccg
gaaaacatcagaattcatggccactttccccatgaaatggacatcagctgggacccactg
ttacctattgaattcaatggtccaggacttgagtataagatctcctacagaaaactggag
gtggaagataaatggcaggagcacctggtcacaagatcctcctttatcgtcaggaacaca
tccacctttgcaccgtacgagatcaaaatccagagcaggaacagcctcggctggggtcca
gaaccaagacccataaccggttactctggagaagatattgtcttttggcactgtctccag
gaaaatgtgtcagttccgactgcagcaccacacaatgtagcagtggaggtgatcaacacc
accgttctcagagtcagctggagcccagttctcccagccacagtgcgaggtcatttagga
ggctacaatgttaactgggagagaatgaaaagcttcctgagtcctgacaagattttagag
gagcataactccaagtctttccctggaaacaggactcatgtcattgtgccaggatttgaa
cctttctctgagtacagactcacagtgaacgtttttaacaagaagggaaaaggaccaaag
agtgatccagtcaacttttatactccagagggcgttccagagaaagtgcccgtgctgatt
cccaggattcaggatgatgacactgtgctgctggaatggggaccaccgtcagtgacgaat
ggcatcctcactggttatcttctaaagtatcacctcttaaataagacttcgctggaggtg
attgattccttcgagctgaacctcactttgcctgacgtcactcaacaccacattgtgaga
tcggacaggggcaacctcttccgcttctacctcagtgcgtgcactcgagcaggttgtggg
cctgcagaactggctgaaaatcacagtcctccagcagaaaaagtcggaacggaagccagc
acttcaactctgcgctggttcatcgggactctgtgtgcggtggcattactcacgcttctg
gcagtgatcgtgtgctttgtgatgaaaaccaagggtggcaaatatgcagtaaaagagaag
gaagatctctttcctgatgcggagtcacaggcaatgaatgacgacgcctatgaatacagt
ggcagcgacgaaaaacgactgaagaaacctatcttgggttccacagacgacacggttgag
gacagaatcagcagagatagtttggccgattactccgatggagacggagaattcagcgag
gatggctcatttatcggagaatatgccggagccaggtaccgggattccatcagtgagccc
agcggacccagcactgccacggcgtaa
DBGET
integrated database retrieval system
