Xiphophorus hellerii (green swordtail): 116725883
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Entry
116725883 CDS
T07363
Name
(RefSeq) 5-hydroxytryptamine receptor 3C-like
KO
K04819
5-hydroxytryptamine receptor 3
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
116725883
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xhe04040
]
116725883
Ion channels [BR:
xhe04040
]
Ligand-gated channels
Serotonin (5-HT3)
116725883
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
116725883
NCBI-ProteinID:
XP_032428180
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Position
9:11127381..11132449
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AA seq
472 aa
AA seq
DB search
MALEETTAKWLLPPTMPSVVILLFLLPVFCSAVEVNCSQPDQPRLLAALSPAFDMSAIRP
VENQLTYTNVSVYFTLYGILGVDEKSQLLVTYIWLNYWWKNEFISWDPVQCGTDKISLPK
EKFWIPDIVINEFMEENKAPSVPYVYLCNDGTVRDSFPVRVVSSCNLIIYTFPFDIQNCS
LTFNSYIYYATEIRVFLGRDADLITEFSKEVMTTMGEWELVDITAKKLVNDDVTGLYTDM
LTFYIRVRRRATMYVVNLLLPSCFLITVDLFSFLLPAESTDRSSFKMTLILGYTVFLLIM
NNLLPVTGNTIPLINVFFSVCLALMVASLLETILITNLLSNSADFSPVPRWIRILVLNFL
GCLVCMPRKPEKPKNSEKRTMSVAAEMKSDEGPEGTGGSAEEEEAVTELKSLSRVLQAIR
CEVEQQQNGKQSSEEWIQVGFIIDRLLFGLYIVFISVSFITIIIVWIKSYKQ
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggcattagaggaaacaacagcaaagtggcttcttccacccacaatgccctctgtggta
atcctcctcttccttctgccagttttctgcagtgccgttgaggtgaactgctcccagccg
gaccagcccaggctcctggcggctctgtctcctgccttcgacatgagcgccatccgaccc
gtcgagaaccagctgacctacaccaacgtcagcgtgtacttcactctctacgggatatta
ggagtggatgaaaaatcccaactgctagtcacgtacatttggctgaactattggtggaag
aatgagttcatcagttgggatccagtccagtgtggcaccgacaagatttctcttcccaag
gaaaagttttggattccagatattgtaatcaatgaattcatggaggaaaataaagcgcca
tcagtcccatatgtttacctgtgtaatgatggaacggtgagggattcgtttcctgtcaga
gttgtgagctcctgtaacctcatcatctacactttccccttcgacatacagaactgctcc
ctgactttcaactcctacatctactatgcaactgagatcagagttttcctcgggcgtgac
gcagatctaatcacagagttctccaaagaggtgatgaccaccatgggtgaatgggagctg
gtggacatcaccgcaaagaaactagtgaacgatgatgtgacgggtctttatacagacatg
cttacattttatatccgagtgcggcgccgtgccaccatgtatgtggtgaatctgctgctg
cccagctgtttcctcatcacagtggacctcttcagcttcctgctgcctgctgagagcaca
gacaggtcctccttcaagatgaccctcatcctgggctacaccgtcttcctgctcatcatg
aacaacctgctgccagtcactggaaacaccatacctctgataaatgtcttcttctccgtc
tgcctggctctgatggtggccagtctgctggagaccatcctcatcaccaacctgctgagc
aactcggctgacttctctcccgtccctcgatggattcggattcttgttctcaattttctc
ggctgtctcgtttgcatgccgcgaaaacctgagaaaccaaaaaattcagaaaagaggacg
atgtcagtggctgcagaaatgaaatccgatgaaggtcctgaaggaacaggaggatcagct
gaggaagaggaggccgtgacggagctgaagagcctgagtcgcgtcctgcaggccatccgc
tgtgaggtggagcagcagcagaacgggaagcagagctctgaggaatggatccaggtgggt
ttcatcattgaccgcctgctgtttggcctctacatcgtcttcatatcagtcagcttcatc
accatcattattgtctggattaaatcatacaagcagtag
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