Xiphophorus hellerii (green swordtail): 116725890
Help
Entry
116725890 CDS
T07363
Symbol
rnf13
Name
(RefSeq) E3 ubiquitin-protein ligase RNF13
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xhe04121
]
116725890 (rnf13)
Enzymes [BR:
xhe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116725890 (rnf13)
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116725890 (rnf13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-RING_UBOX
zf-rbx1
zf-C3HC4_3
zf-ANAPC11
zf_RING_Vps8
zf-RING_16
Prok-RING_4
FeoB_associated
Hemotin
zf_RING_Vps8_fungal
Glucos_trans_II
zf-RING_4
DUF7027
PHDvar_NSD
PHD
RINGv
Neur_chan_memb
LapA_dom
zf-RING-like
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
116725890
NCBI-ProteinID:
XP_032428187
LinkDB
All DBs
Position
9:complement(11260560..11295978)
Genome browser
AA seq
377 aa
AA seq
DB search
MLLSLGMLMLSATQVYTIFTVQLFAFLNLLPVEADITAYSFDNKTETFDDMPARFGYRLP
SDGLKGFLIGARPENACEPLEPPPRENLTGAFIVLIKRYDCNFDMKVLNAQKAGYKAAIV
HNVDSDDLISMGSNDLDVLKQIVIPSVFVSELTANALKDDYMYDKGGHLVLIPDFSLPLE
YYLIPFLIIVGICLILIVVFMITKFVQDRRRARRSRLRKDQLKKLPIHKFKKGDNYDVCA
ICLDEYEDGDKLRVLPCSHAYHSKCVDPWLTKTKKTCPVCKQKVVPSHGDSDSDSEEGDS
GPDENEVSESTPLLRSQASTSAHSFGTMSGASRSEQDSSEYDDDELDSSDSEEEVTVETV
VVQMQQPSSDEHDLPRA
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgtctctgggaatgctgatgctctccgccacccaggtttacaccatcttcacc
gtccagcttttcgccttcctcaacctgctgccagtggaggccgacatcactgcttactcc
tttgataacaaaaccgaaaccttcgacgacatgcctgctcggttcggctaccggctcccc
agcgatggacttaagggtttcctgatcggtgcccgacctgaaaatgcgtgtgagcccctc
gaaccgcctcccagggaaaacttgacgggcgccttcatcgtcctcatcaagcgatacgac
tgcaacttcgacatgaaggtcctcaatgcacaaaaagctggatataaggcagccattgtt
cacaatgtggactctgatgacttaatcagcatgggatccaacgatttggatgttctgaag
cagatagttattccctctgtatttgtgagtgagctgaccgccaatgctctcaaagacgac
tacatgtatgacaaaggaggacacctggtcctgatcccagacttcagcctgcctctggag
tactacctgatccccttcctcatcatagtggggatctgcctcatcctcatcgttgttttc
atgatcacaaagttcgtccaggatcgacgcagagctcggagaagtcgtctgaggaaggat
cagctgaagaaacttcccatccacaagttcaagaaaggggataactatgatgtctgtgcc
atctgcctggatgaatatgaggatggagataaactcagagtcctgccgtgctctcatgcc
tatcacagcaagtgtgtggacccctggctgaccaaaaccaagaagacgtgtcctgtgtgc
aagcagaaggtggtcccctctcatggcgactcggattcggattcagaggagggggacagc
ggccccgacgagaacgaggtgtccgagagcacgcccctgctgcgctcccaggcctcgacc
agcgcccactccttcggcaccatgtcgggagcgtcgcgctcggagcaggactcctccgag
tacgacgacgacgagctggacagcagcgacagcgaggaggaggttaccgtggagacggtt
gtggtgcagatgcagcagccgagctccgacgagcacgacttaccgcgagcttga
DBGET
integrated database retrieval system
