Xiphophorus hellerii (green swordtail): 116725904
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Entry
116725904 CDS
T07363
Name
(RefSeq) zinc finger BED domain-containing protein 1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116725904
04121 Ubiquitin system [BR:
xhe04121
]
116725904
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
116725904
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
116725904
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
hAT-like_RNase-H
HP1454-like_C
Motif
Other DBs
NCBI-GeneID:
116725904
NCBI-ProteinID:
XP_032428200
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Position
9:29642006..29643749
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AA seq
475 aa
AA seq
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MIVKDTQPFTIVDDVGFRTFVSYLDPNYVLPTRQALKAMVEAKYESAKEHAMAKVEKVAA
VSLTSDMWTSINMDAYLAVTCHFVEENEKLSSVLLGVQAFPQSHTAENIACVKASLMEEW
GISGKVTCMVTDGAPNMVACVRELKLRHHICVAHTLNLVVKRALDQHPVLSGLRAKARKL
VDYFRSSTTVKVCSFLLFQYIMLIVCLYSYCSDLMAYSSVSLKEKLTQVQLQLGMQATKL
MQEVETRWNSTYLMLQRLVELREPVGAALAGLHTDIPFFTASEFDIVVACLSLLSPFYDA
TTELSAEEHMSASKVIPLLKMIEKALQEEDTKSAPAVAVEIGEQLIRQLREKLHMLQSMS
ILSLATLLDPRFKLIAFFSNTKAAEAVKRLTSECATVIRRNTEENTHEIPQASTSQEFTG
GSRLWQRLDTSVMEAKRTQNVSADATVEVQRYLSEANISRLENPLEYWANHRLEK
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgatagtgaaggatacccagcctttcactattgtggatgacgttggattcaggacattt
gtgtcttacctggatcccaattatgttctccctacaaggcaggctctgaaggccatggtg
gaggccaaatatgagtctgctaaggagcacgctatggctaaagtagagaaggtggctgct
gttagccttacatcagatatgtggacatccatcaacatggatgcctacctggcagtgaca
tgccactttgtggaggagaacgaaaagctgagctcagtgttgttgggagtgcaggcattc
ccccagtctcacactgctgaaaatattgcttgtgtgaaagcctccctgatggaggaatgg
ggaatctcaggcaaggtgacatgcatggtcaccgatggtgctcctaacatggtggcatgc
gtgagagagctgaagcttcgccaccacatttgtgttgctcacaccctcaatcttgttgtg
aagagggcgcttgaccagcaccctgtgctctcaggcctccgggccaaagcaaggaagctg
gttgactactttagaagcagcaccactgttaaggtatgctcttttcttttattccaatat
ataatgttaatagtttgtctgtactcctactgcagtgacttaatggcctactcttctgta
tctttaaaggagaagcttacacaagtgcagcttcagctgggcatgcaagcaaccaagctg
atgcaggaggtggaaacaagatggaacagcacctacttgatgctgcaacgtctggtggag
ttgagggagccagtaggagcggcattggctggattacacactgacattccctttttcact
gccagtgagtttgacattgttgtagcgtgcctttctttactctctcctttctatgacgcc
accacggagctctctgcagaagaacacatgtcagcatcaaaagttatccccctcctgaag
atgatagagaaagcccttcaggaggaagacaccaagtcggcacctgcagtagcagtggaa
ataggagagcagctcatcagacagctcagggagaagctgcacatgctccagtcaatgagc
atcttgtcgctggctacactcctggacccacgatttaaacttatagcatttttcagcaac
acaaaagctgctgaagcagtgaagcgcttgacttcagagtgtgccaccgtcatccgacgg
aacacagaagagaacactcacgagattccccaggcttccacctctcaagaattcactgga
ggtagcagactttggcaaagattggacactagtgtcatggaggcaaagaggactcaaaat
gtgtcagcagatgccaccgtagaggtccagcgttacctgtcagaggcaaacataagcagg
ctggagaaccccctggagtactgggctaatcatcggctggagaagtag
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