Xiphophorus hellerii (green swordtail): 116725987
Help
Entry
116725987 CDS
T07363
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
116725987
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xhe04121
]
116725987
Enzymes [BR:
xhe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116725987
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116725987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
RING_XB3-XBAT31
zf-B_box
ANCHR-like_BBOX
U-box
zf-RING_10
DUF733
DHquinase_II
zf-RING_6
zf-Nse
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
116725987
NCBI-ProteinID:
XP_032428328
LinkDB
All DBs
Position
1:2345133..2351812
Genome browser
AA seq
551 aa
AA seq
DB search
MFLSKQEDQLAQELSCPICLQLYNDPVVLPCGHNFCRACISKSADPTYSDKEPLRCPECR
ETYDGVDTLQKNVKLSNIVEGFQVSSQNIYEEILDVIKPANPEADNVIFCDQCIDDKTPA
VKTCLKCEVSLCFRHLQKHNERESFKTHSLVEPQKDLGSRACPDHNLPLEYFCSNDMKSL
CITCLEGHNENHDVLTVSVAEEEMRRALESRGKVVSSRLQLTECLLQKTQEDQGASEAVG
DKMVNKAVSLMDSMASIVDRFRERLRLILEEERRQRRKSCQLGVSALEEQQQLLQEAQNS
ASEVLSETDTCAFIHRFMMIEQKVRDAATGSLPSTISSKVDLNTKRLQTDLKTIDFRTEM
VRLLDTLHILLNPLEVTFNVCTAHPCLLVSNDLHTVRCTSSKQSYVDHPERFLSAPQILC
SQGFSTGTHIWVAEMGSSCMWSLGACYKTIPRRGDHSRLGNNLVSWRLQWKNGKLTAYSS
SSNAALGETFQHPSKIEVVLDCEGGTLSFHTIQSRREHLYTFKTVFKEPVYPAFSIHSNT
SESWITLQSQM
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgtttttatcaaagcaagaggatcagcttgcccaggagctgagctgtcccatctgtctt
cagctctacaatgatccagttgttctaccctgtgggcacaacttctgtcgagcttgcatc
tccaagtctgctgaccccacatacagcgacaaagaacctctacgctgcccagagtgtcgc
gagacctatgacggcgtcgataccctgcagaaaaatgtcaaactttccaacattgttgag
ggtttccaagtctcttcccaaaacatttatgaagagatcctggatgtgatcaaacctgca
aacccagaggcagacaatgtcattttctgtgaccaatgcatagatgacaagactccggcg
gtgaagacctgcctgaagtgtgaggtgtcgctgtgcttcaggcatctccagaagcacaac
gagagggagtccttcaagactcactctctggtggaacctcagaaggatttggggagcagg
gcctgccccgaccataaccttccacttgagtacttttgttctaatgacatgaagtctctg
tgcatcacatgtttggaaggccataacgagaaccacgacgtcctcaccgtcagtgtggca
gaggaggagatgagacgagccttggagagccgtggcaaggtggtttccagccgactgcaa
ctgacagagtgcctccttcagaagacacaagaggaccagggagcctccgaggctgtcgga
gataaaatggtcaacaaggcagtctcacttatggatagtatggcttcaatagtggacagg
ttcagggagcgactgcgtttgattttggaggaggagagaaggcagcggcgcaaaagctgc
cagcttggagtgagtgcattggaggagcagcagcagctgctgcaggaggcccagaacagt
gcatccgaggtgctcagcgagacagacacatgcgccttcatacacagattcatgatgatt
gaacagaaagtgagagatgctgccacaggcagtcttcccagcacgatttcctcaaaggtt
gacctgaacaccaagcgtctccagacagacctcaaaaccatcgacttccgcacagaaatg
gtccgtctccttgacacccttcacatcctgctcaaccctctggaggtcacgttcaacgtc
tgcactgcccacccctgcttgttggtgtccaacgacctgcacacagtcagatgcaccagc
tccaagcagtcctacgtagaccacccggagcgcttcctgagtgcacctcagatcctgtgc
agccagggtttttccacaggcacgcatatctgggtggcagaaatgggcagcagctgcatg
tggtcccttggcgcgtgctacaagaccatccctcgccgtggagaccacagccgcctgggg
aacaacttggtgtcctggagactacagtggaaaaacggcaagctaactgcgtactcttca
tctagcaatgctgcgctgggggagacgttccaacatccatctaagattgaggttgtgctt
gactgtgaaggtggaaccctatctttccacactatccaatcacgcagagaacacctttac
acctttaagactgtgtttaaggagccagtttacccagcttttagtatccattcaaataca
tcagagtcttggatcactctacaaagtcagatgtga
DBGET
integrated database retrieval system
