Xiphophorus hellerii (green swordtail): 116725989
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Entry
116725989 CDS
T07363
Symbol
gabra5
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-5
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04080
Neuroactive ligand-receptor interaction
xhe04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116725989 (gabra5)
04082 Neuroactive ligand signaling
116725989 (gabra5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xhe04040
]
116725989 (gabra5)
Ion channels [BR:
xhe04040
]
Ligand-gated channels
GABA-A
116725989 (gabra5)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF7205
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
116725989
NCBI-ProteinID:
XP_032428325
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Position
9:complement(24315857..24351003)
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AA seq
459 aa
AA seq
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MADGMCSSVAMRRLCFCVLLVSITCRLSLSQDLAGTPKQAEINDNITIFTRILDGLLDGY
DNRLRPGLGEKVTEIKTNIFVTSFGPVSDTEMEYTIDVFFRQSWKDERLCFKGPMEMLAL
NNLLASNIWTPDTFFLNGKKSIAHNMTTPNKLLRLKDDGTLLYTMRLTISAECPMQLEDF
PMDAHACPLKFGSYAYPVSEVIYKWTEDAAKSVVVAEEGSRLNQYHLIGQTAGTEEIYTS
RGEYTVMMAHFYLKRKIGYFVIQTYMPCFMTVILSQVSFWLNRESVPARTVFGVTTVLTM
TTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSWAWDGKKAMEAQ
QPKKKDPLALSMKPNNTCSAGVNYTANLTKDASISTISNSTTIQLKPSESKAPDPKKTYN
SVSKIDKMSRIVFPVLFGTFNLVYWATYLNREPVIKGAE
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgggatgtgctccagcgttgcaatgagacgtctatgcttctgtgtcttgctt
gtgagcatcacctgccgtctgagcctctcccaggatttagccggaacccccaaacaggcg
gagataaatgacaacatcaccatcttcacccgcatcctggacggactgctggacggttac
gacaacagactccggcccggtctgggagagaaggtgacagagatcaagaccaacatcttt
gtcacaagcttcggtccggtctctgatacggaaatggaatacaccattgacgtattcttc
cgtcaaagctggaaagatgaaaggctttgcttcaaaggcccgatggagatgctggccctg
aataacctgctggccagcaacatctggacccccgacacgttcttcctcaacgggaaaaag
tccattgcgcacaacatgaccacgcccaacaagctgctgcggctgaaagacgacgggacg
ctcctctacaccatgaggctcaccatctcagcagaatgccccatgcagctggaagatttc
cccatggatgcccacgcctgtccccttaagttcggaagctatgcctaccctgtctcagaa
gtgatctacaagtggactgaggacgcagccaagtctgtggtggtggcagaggaaggctcg
aggctcaaccagtatcacctgatcggccagacggcgggaacggaggagatctacaccagt
cggggcgagtacacagtgatgatggctcacttttacctgaagaggaagataggctacttc
gtcatccagacctacatgccgtgcttcatgactgtgatcctgtcccaggtttctttctgg
ctcaaccgagagtcggtgccagcaagaaccgtctttggtgtgaccacggtcctcaccatg
accactctcagcatcagcgctcgaaactccctacccaaagtggcctatgccaccgccatg
gactggttcattgcggtgtgctatgccttcgtcttctcagccctcattgaatttgccaca
gtgaattattttaccaaaaggagctgggcctgggacgggaaaaaagcaatggaggcccaa
cagcccaagaaaaaagacccattggcgttgtccatgaagcccaacaacacttgctccgcc
ggtgtgaactacacagccaacctcaccaaggacgcgtccatctctaccatttcaaacagc
acaactattcagctcaaaccgtctgaaagcaaggccccggaccccaaaaagacttacaac
agcgtgagcaagatcgacaagatgtccaggattgtgttccccgtgctttttgggaccttc
aacctggtgtactgggccacgtacctcaacagggagccggtgattaaaggagccgagtga
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