Xiphophorus hellerii (green swordtail): 116726020
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Entry
116726020 CDS
T07363
Name
(RefSeq) capping protein, Arp2/3 and myosin-I linker protein 3-like isoform X1
KO
K20493
leucine-rich repeat-containing protein 16
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116726020
Membrane trafficking [BR:
xhe04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
116726020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
Myosin_TH1
Motif
Other DBs
NCBI-GeneID:
116726020
NCBI-ProteinID:
XP_032428371
LinkDB
All DBs
Position
9:22008794..22050348
Genome browser
AA seq
1506 aa
AA seq
DB search
MASKEISAFGFVSVTKDMTESIRKIIDKSSIKFICSIKLDTKNGKTEDRILVLTTWRLYF
LAPKIPAKVETTFNFLEIRALNSHPDHQVIIDTDKSGYTLRFESREHLNHVVSHINFALS
RIFNNSIFAPSICHSDSDLSEGSRKYSPSSETSVETQRACGGFSETYAALCDYNGISCKE
EVQWDVDTIYHSQDSREFNLLDFSHLESRDLAVIVASMAYNTWFTKLYCRDLRIGSEVTE
QVLHTVSKSSSLEEITLENAGLKSDFPQKMATALSENPASVIHSVNLAHNSLDNQGVSSL
IQQVSRLSKGLRLLNLSKTSLTSKGVVSLSQALCSSDEYSNSLLHLDLSKNPGVLSGEDA
SNFYLFLSQPNCLVHLDLSATDCSVDSLFGALLRGCCADLSFLNLSKNTFSHRKVKDTLP
LFRQFFSSAFSLTHVSFASMKLPPDVLRAVLSGLTTNPHITDLHLDISGCELRSAGAAVI
QELFPRVFSVATLDISDNGLDADLLTVLPALSRHPSLKHLHLGKNFNIKNRVLDEVLQKL
VSLMQEEECALQSLSLVDSRLRSRGTVLVNALGSNTCLRKVDLSGNNMDDIGAKMLSKAL
QINTTLRSVTWDRNNTSAAGFLDVARALEHNFTLQYMPLPLSDISQAYRSAPEKTEQALT
KIQRALVRNNQTQRFSQRQALRLHQGLVTSTAEQVMERLCVRVQQQLCLLRGAGELEEIQ
AAKQVLKEARNSRALYPSLCELAHVLSVDGPVRQRLDSLAGELAKAADKELQVIVDSMVS
LCRELCPLSSSAAERLSPPLSSVSERVSIPRSAIRTALMERAAQDIHRALEEVKLSVVSY
LTNSIVDQILQELYATHKTLTRQVSHLKCWDGTCEDGTAWSFNRHRDSLDITDEELGTSI
DTIAIKKRSSRTRRIRPVSTRLSLCDDSSSSPPPSGPSYSSPLSHSASWEGLSELPTQGL
PLRHVTRVRPRPPRRHRGGHITAETHCSENGGISPLDDGLPDFYTKRVLPDSQLSSLHKA
HSLRRKKRRNMLAIFGFRKNRSQTLSNQGPESEVEVYGDGCHTVATAPTGTAMENVYTLL
QAPRPAAKSPSDGADGKMNDQQGKGALILSPPPVPGIPHPGMGGGKHPFYSPQEISEMDA
VFEQPVETDKYWVDDKQRTEVLEAEADWMIESRPGETPAERQRFDERTPGEPRTSDRQSD
RYWAESRPVERQWTVDRHTQRQIDRKIERQWMGGRQIERSWSESRPVDLQVDSQWTGRKQ
DRQVQPLHLAQRPLPPYPSERTPSPKQEGGDLLKSNAEAAAIEWHPQDPQGDGGGPADGW
RSGGEAGGGRKPEPPPQSSKPNVTRLRPRHRRESSDALPEEEGDEERDAGKTERRERRRD
SEGQPPPIPEKPKTSSYVTFSKESANERNLPPPPVPPPAIKPIHGLPDRAASQGDEGLRP
QAPAKPQRNRKAMSCDAGSERESPNNIEKPPNRKPPVKKPRLPQNRNKSLDLSDSFNAAP
GHSELV
NT seq
4521 nt
NT seq
+upstream
nt +downstream
nt
atggcttctaaagagatctcagcctttggtttcgtcagtgtgaccaaggatatgacagaa
agcatccggaagattattgataaatcatccatcaagttcatttgtagcattaagcttgac
accaaaaacggcaaaacagaggacaggattctggttctcacaacatggcgtctctatttc
ctggctccaaagattccggctaaggtcgaaaccacgttcaacttcttggagattcgagct
ttgaattctcaccctgatcaccaggttattatcgacaccgacaagtccggttacaccctg
aggttcgagtcccgcgaacacctcaatcatgtggtcagccatattaatttcgccctgtcc
cgaatattcaacaattccatctttgccccgtccatctgtcactcagacagcgacctttcg
gagggcagcaggaagtattcgcccagctcggagacttcagtggaaacccagagggcctgt
ggaggcttctcagagacctacgctgctctgtgcgactataatggcatcagctgcaaggag
gaagtgcagtgggatgtggacactatctatcactcccaggacagccgagagtttaacctg
ctggacttcagccacttggagagcagggatttggcggtgattgttgcatcaatggcatat
aacacctggttcaccaaactgtactgcagagaccttcgcatagggtcagaggtcactgag
caggtcctgcacacggtcagcaaatcttccagccttgaggagatcactctggagaacgcc
gggttgaaatcagacttccctcaaaagatggccactgctctttcagagaacccagcttct
gttatccactctgttaatttggcccacaattcactggacaaccaaggtgtgtccagctta
atccagcaggtgagtcgccttagcaagggacttcgtctcctcaatctgtccaagacttca
cttacgtcaaagggcgtcgtgtctctctctcaggctctgtgctccagcgatgaatactcc
aactccctcctgcacctggacctgagcaagaaccccggggtcctctcaggggaggacgcc
tcgaacttttatctcttcttgtctcagccaaactgcctggtccacttggatctgtcggcc
acggactgctccgtcgactctctatttggggctcttctgagggggtgttgcgctgatctt
tcctttctcaatctgtccaaaaataccttctcgcacaggaaagtgaaggatacgctgccg
ttgttccgtcagttcttcagctcggccttcagcctcactcatgtcagcttcgcgtctatg
aagctgcccccggacgttctgagagcggtgctgtcggggctgaccaccaatcctcacatc
accgaccttcatctggacatcagcggctgtgagctgaggtctgcgggagccgccgtaatc
caggagctcttcccccgggtcttctctgtcgccacgctggacatctccgacaacggtctc
gatgcagacttgctcacagtgctgcctgccctttcgagacacccttccctaaaacacctt
catctgggcaagaacttcaacatcaaaaacagggttctggacgaagtcttgcagaagctg
gtttcactcatgcaggaggaggaatgcgccctgcagtctctgtccctggtggactcgcgc
ctgcgctcccgggggaccgtgctggtcaacgcgttgggcagcaacacctgcctgagaaaa
gtggacctcagcggaaacaacatggacgacatcggggccaagatgctcagcaaagccctg
cagatcaacacgacgctcaggagtgtgacatgggatcgcaacaacacctctgccgcagga
tttctcgacgtggcccgagccctggaacataatttcaccttgcagtacatgcctctgccc
ctaagtgacatcagccaggcgtaccgcagcgctccggagaagacagagcaagccctcact
aagatccagcgcgctctggtcaggaacaaccagacgcagcgcttctcccagaggcaggct
ctgcggctgcaccagggcttggtcaccagcaccgccgaacaggtgatggagcgcctctgc
gtgcgggtccagcagcagctttgcttgttgcgaggcgccggagagctggaggagattcaa
gccgccaaacaagtcctaaaagaggccaggaactctcgagctctctacccgtcgctgtgc
gagctggcccacgtgctgtctgtggacgggcccgtgcggcagagattggactccctggcc
ggcgaactcgccaaagccgccgataaggagctgcaggtgatcgtcgactccatggtgtca
ctctgccgcgagctctgtcctttatcatcgtctgcggcagagagattaagccctccgctc
tcgtccgtctccgagcgggtgtccatccctcgctccgccatccgcaccgccctcatggaa
agagcggcgcaggacattcacagggctttggaagaagtgaagctgtccgtggtttcctat
ctcaccaactccatcgtggaccaaatcctgcaggagctctacgccacccacaagactctg
acccggcaggtgtctcatctaaaatgctgggatgggacgtgtgaagatgggacagcgtgg
agttttaacagacacagagactccctggacatcacagatgaagagctcggcaccagcata
gacacgattgccataaagaagcgcagctccagaacgaggagaatacgacccgtctccacc
aggctgagcttgtgtgacgactccagctcctctccgcctccctctgggccgtcgtactcc
tcgccgctgtcccactcggcgtcctgggaaggcctgtcggagctgcccacgcagggtctg
ccgctgcgccacgtgacgcgcgttcggccgaggcctccccggaggcacaggggaggacac
atcaccgcggaaacacactgcagtgaaaatggaggaataagccctctggatgacggactc
ccagatttttatacaaaacgagttttacctgacagtcagctttcctccctgcataaagca
cactctctgaggaggaagaaaaggaggaacatgctggccatctttggcttccgtaagaac
cgcagccagaccctgtccaatcaggggccggagtcggaggtggaggtctacggagatggg
tgtcacacggttgctacggcgcccacggggacagcaatggagaatgtatacacactcctc
caagctccgcggccagccgccaagtctcccagcgacggggccgacgggaaaatgaatgat
caacagggaaaaggcgctcttatcctgagtccgccaccggtgccggggatccctcaccca
ggcatgggaggaggaaaacaccccttctactctccccaagagatatctgaaatggacgcc
gtgttcgagcaaccagtggagacggataagtactgggtggacgacaaacagcggacagaa
gtgctggaggcggaagcggactggatgatcgagagccggccaggcgagacgccggcagag
aggcagcgctttgacgagaggacccccggagagccgaggacgtccgacagacagagcgac
aggtactgggccgagagcaggcccgtggagaggcagtggaccgtcgacaggcacacccag
cgccagatcgacaggaagatagagaggcagtggatgggcggcaggcagattgaaaggtcg
tggtctgagagcagacccgtggacttacaggtggacagtcagtggacggggcgaaagcag
gacagacaagtccagccgcttcatttggctcaaaggccgctgcctccgtacccgtcggaa
aggacgccgtcgcccaaacaggaggggggcgacctgttgaagagcaacgcagaggcagca
gccatagagtggcatccccaggacccgcagggagacggagggggtccagcagatgggtgg
aggagcggcggagaggcagggggaggccggaaaccagaacccccaccacagagcagcaaa
cccaacgtgacccgactgcggccgagacacaggagggagagttcagacgccctgccagag
gaggaaggcgatgaagagagggatgctgggaagacagagaggagagagagaagacgagat
tccgagggtcagcctccgcccattcccgaaaagccaaagacctcctcctacgtgaccttt
tctaaagaatcggcgaatgaaaggaacttgcctcctcctccggtgccgcctcccgccatc
aagccgatccacgggctcccagacagagcggcgagtcaaggcgacgaaggactgagacct
caggctcctgcgaagccgcagaggaacagaaaggcaatgtcctgtgatgcaggctctgaa
agagaaagccccaataacattgagaagcccccaaatcgcaaaccccctgtgaaaaaacct
agactaccacaaaacagaaacaagtctctggacttgtctgacagcttcaacgccgcacct
ggtcacagcgagctggtgtga
DBGET
integrated database retrieval system
