Xiphophorus hellerii (green swordtail): 116726021
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Entry
116726021 CDS
T07363
Symbol
clock
Name
(RefSeq) circadian locomoter output cycles protein kaput isoform X1
KO
K02223
circadian locomoter output cycles kaput protein [EC:
2.3.1.48
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116726021 (clock)
03036 Chromosome and associated proteins [BR:
xhe03036
]
116726021 (clock)
Enzymes [BR:
xhe01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
116726021 (clock)
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
116726021 (clock)
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
116726021 (clock)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
HLH
PAS
PAS_9
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
116726021
NCBI-ProteinID:
XP_032428376
LinkDB
All DBs
Position
9:22199709..22232028
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AA seq
832 aa
AA seq
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MTSSINRDDSSIFDGLMEEDEKDKAKRESRNKSEKKRRDQFNVLIKELGTMLPGNTRKMD
KSTILQKSIDFLHKHKEIAAQSESTEIRQDWKPPFLSNEEFTQLMLEALDGFFLAIMTDG
NIIYVSENVTSLLEHLPSDLVDQNLLNFLPSGEHSDVYKALSSHVTEGETLTPEYLKTKN
QLEFCCHMLRGTIDPKEPPVYEFVKFIGNFKSLNNVPNCNRNGFDGVIQRSLHSTFEDRV
CLIATVRLAKPQFLKEMCTVEEPNEEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSG
YDYYHVDDLETLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFI
VCTHTVVSYAEVRAEQRRELGIEDCPPEVAADKSQDSGSESQLNASSLKEALERFNHSRT
PSASSRSSRKSSHTAVSDPASSQMKMQGDRSTPGRQSVSAVEMTSQRRSSVSSQQSMSSQ
NTGQNGAPSMTSQQSQQLPQQQLQNNQSVQYSNQLEAMQHLKDQLEKKTRIIEDNIQRQL
DELRQIQVELERVHGQSLQMFQQKGDEGLNLSSAHTPHGTAGQQGATMSMQGQVVPPAAL
QNNMQQQQAVQTQTQSQQQTLLRDQSTVMSQSHRSTLTLQPQQNPLSGSLYNTMMIPQQS
QANMVQISTSLAQNTGPSNTAVATFAQDRSAQIRFPTAPQLLTKLVTGQIPMGAVMVPTS
MFMGQVVTAFAPQQGQTQTISISQQQEQQQQIQVQNQVSALQAGQASLATQQPQFLQAPR
LLHGNQSTQLILQAAFPLQQHSTFSAAAQQQQHQLAAHRSDSLSDRPSTQPQ
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgacctcaagcattaaccgagatgacagcagcatttttgatgggttaatggaagaagat
gaaaaggacaaagccaaacgtgagtcccgtaacaagtccgagaagaagcgcagagaccag
ttcaatgtcctcattaaggagctgggcaccatgttgccaggaaacacccgcaagatggac
aagtccactattttgcagaaaagcatcgacttcctgcacaaacacaaagaaattgctgct
cagtcagaatcaacagagatcagacaagactggaagcctccgtttcttagtaatgaagag
ttcactcagctgatgctggaggccctggatgggtttttcctcgccataatgaccgacggg
aacataatctacgtttcggagaacgtgacgtctcttctcgaacacttaccatctgatctt
gtggatcagaaccttttaaactttctgccctcgggggagcactctgacgtgtacaaagct
ctgtcctcacatgtcacagagggagagactctaacgccagagtatctgaaaacaaagaat
cagcttgagttctgttgccatatgcttcgagggacaattgatcccaaggagccccccgtg
tatgaatttgtcaaattcataggaaacttcaaatctctgaataatgtgcctaactgtaac
agaaacggttttgacggggtgatccagcgatcgcttcactctacgtttgaggacagagtg
tgcctgattgcgactgtaaggctggccaagccgcagttcctcaaggagatgtgcactgtt
gaggagcctaatgaggaattcacctccaggcatagcttagagtggaaatttctcttcttg
gaccacagagccccgcccatcatcgggtacctcccattcgaagtcctgggtacctcaggt
tacgactactaccatgtagacgacctggagacactggccaaatgccacgaacacttgatg
caatatgggaaaggcaagtcgtgctactacaggttcctcaccaaagggcagcagtggatt
tggctgcagacccactactacatcacataccatcagtggaactccaggcctgagtttatc
gtctgcacacacactgttgtcagctacgctgaagtacgagcagaacaacggcgagagctc
ggaatcgaagactgcccccccgaggtcgcagctgacaagtcccaggattcaggctccgaa
tcgcagctcaacgcctccagcctgaaagaagctctggagcgttttaaccacagccggacc
ccgtcagcctcatcgcgcagctcgcgcaaatcctcccacactgccgtctctgacccggcc
tcttcacagatgaagatgcagggagacagaagtacaccaggccgacagtctgtctctgcc
gtggaaatgacatcgcagcggagatcatcagtcagcagtcagcagtcgatgagctcccag
aacacgggccagaacggggcgccttccatgacttcacagcagtctcaacagctgcctcag
caacagcttcaaaacaaccaatcggtgcagtactccaaccagctggaagccatgcagcac
ctgaaggaccagctggagaagaagaccaggataatcgaggacaacattcagcggcagctg
gatgagctgcggcagatccaggtggagctggagagggtccacgggcagagtctgcagatg
ttccaacagaaaggggatgaaggactgaacctcagctcagctcatacgcctcatggcact
gctggccagcagggggcgacaatgagcatgcaaggccaggtggtccctccagcagctcta
cagaacaacatgcaacagcagcaggcggttcaaacccaaacccagtcccagcagcaaaca
cttctgagggaccagagcacagtgatgtcacagtctcaccgctcaacactaactctgcag
cctcaacagaatcctctctccggctccctctacaacactatgatgataccacagcagagc
caagctaacatggttcagatttccacaagcctggcgcaaaataccggacccagcaacact
gccgtggcaacatttgcacaggatcgttctgctcagataaggtttcctacagctcctcag
ctgctgactaagctggtcacaggacagatcccaatgggggcggtcatggtccccacatcc
atgttcatgggtcaggtggtgacggcctttgctccccagcagggccagactcagaccatc
agcatttctcagcagcaggagcagcagcagcagattcaggtgcagaaccaggtttcagcg
ctgcaggcaggtcaagcttctctggccactcagcagccacagtttctgcaggctcctcgg
ctccttcatggaaatcagtcgacccagctaatcctccaggcggcgttccctctgcagcag
cacagcaccttctctgccgcagcgcaacagcagcagcatcagctggctgctcaccggtca
gacagtctgtctgaccgcccgtccactcagcctcagtag
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