Xiphophorus hellerii (green swordtail): 116726022
Help
Entry
116726022 CDS
T07363
Symbol
polrmt
Name
(RefSeq) DNA-directed RNA polymerase, mitochondrial
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
xhe03029
]
116726022 (polrmt)
Enzymes [BR:
xhe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
116726022 (polrmt)
Mitochondrial biogenesis [BR:
xhe03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
116726022 (polrmt)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
PPR_2
PPR_3
Motif
Other DBs
NCBI-GeneID:
116726022
NCBI-ProteinID:
XP_032428381
LinkDB
All DBs
Position
9:19000841..19045692
Genome browser
AA seq
1321 aa
AA seq
DB search
MSLLRACSLAKCLGRRSLADARRCFAERCQLCVSVRSTAVRRISETPFCLQRRNISSVIL
KSEDAKKRVHEQSQLLDVLKARIQQLQSDVVLDVQHAKVQFVKSPSFGGGVSSGRTVKGS
SKDKSDIPKSGQVVTKGASKSQPSRWMKKLSEENINKLKKQQILQQKVQRNAKEKLPGKS
KASKSSLMPTGTTHKTMSSAAKKRRGGTKLSDEIRSSVSSAATVTAATSSKAAEAVKTSK
QKRRDSKSKVSDKDATKKTKDGDLAEIEKLEKRLDEQVQQRIRLSTTESFQESSTGSSCG
DIQLSIRSYLEACVFIGDIERSQNFLVSQHRVMSRRKHLTTDVYNIMMRVWAKKGTLNQI
GRIFILMEEADLKPNVGSYSAALECMGRNPNCPPKVISRCLNQMKKDGLCVDDLFRECVF
QQDERDMLLKAVQTVKPDYEPSLTLNASQCSSPLVQDFYTNREHHIYPKLDFTQEELQRC
FQCQLSVEQACTITIDSVEAMKPVTENMVKMRELLAEQRAQWQMVLLQALRENKMILTKT
NTRDYKLNLYPYLCLLEDKEYVDIMIQSVSNLPPSGESLKILAHDLGNRIYTKYCVRQKH
QNGIVEKLGSIYDAYTELLAKDTKVCNVLPREQWCKLEMEQSSGPTLQGAETSWPYVLML
ELGTFIVDIMVKNLKINSDILNPAYDRKRIPILYHMYTFRSTRQVGFIKPHPILTQMQQE
AMETTLTFDSSVMPMLCPPVPWTSEKFGAYLLTPAKLMRTTHGATQHEELLEKCPNLHPV
FDSLNQLSNCTWRINKPILDIIISIFNDRGSDKLDIPPPLSEAPKIPHFNPQDPAYTASE
KAHMKREVINAKKKCSEMHSLRMDALYKLSIAHHMRDKLFWFPHNMDFRGRTYPCPPYFN
HLGSDVTRATLMFAEGKPLGPKGLDWLKIHLVNLTGLKKRSSLQGRLEYADSIMEDILDS
ADDPLNGKKWWMEADEPWQALACCMEIANAVRSPDPTKFVSHFPVHQDGSCNGLQHYAAL
GRDVIGATSVNLMPCEVPQDVYSGVAQQVEELRTRDAAKGLKIAQVLEGFISRKVVKQTV
MTVVYGVTRYGGRLQIEKRLKEIEEFPKEHVWDASHYLVRLVFSGLKEMFTGTREIQDWL
TESARLISKCGHTVEWVTPLGLPIIQPYHRTRNLVLKSTMQHINLQISHDTKERPDTVKQ
KNAFPPNFIHSLDSTHMMLTSLHCYSAGLTFVSVHDCFWTHALTVDTMNKICREQFVALH
SQPILQGLSNFLLLKYCSTIQREAKNKKYQEYRRLMLLLAKVPQTGDFDLQRVKESTYFF
S
NT seq
3966 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttctccgagcttgctcgctcgccaaatgcctcggtcggcgcagtttagcggac
gctcgcaggtgttttgcggagcgctgccagctgtgtgtctcggtgagaagcaccgcagtc
agacggatatcagaaacacctttctgcctacaaagaagaaatatttcgtctgtaatcctg
aaatcagaggatgcaaagaaacgtgtgcatgaacagtctcagttgttagacgtccttaaa
gccaggatccagcaactccaatctgacgtcgttttagatgtccaacatgcaaaagtccag
tttgttaaatctccttcttttgggggaggtgtttcatctggaaggactgtcaaaggatcc
tctaaagacaaaagcgacattcctaaatctgggcaggtggttacaaaaggggcctccaag
tctcagccgagccgctggatgaaaaaattatctgaggagaacataaataaacttaagaaa
cagcagatcctccagcagaaagtacagagaaacgctaaagaaaagctaccggggaaatct
aaagctagcaaaagtagcttaatgcccacaggtacaacacataaaactatgtcttctgcc
gcaaagaagaggagaggtggcacgaagctgtcagatgaaatccgctcctcggtttcttca
gcagccactgtaacagccgccacctcatcaaaagcagccgaggcagttaaaacatctaaa
cagaagcggagggactcaaaaagtaaagtttctgacaaggacgcaacaaaaaagacaaag
gacggagacctggctgagattgagaagcttgaaaaacgacttgatgagcaagtacagcaa
cgcatacgtttgagtacgacggagagcttccaggagagcagcacaggaagttcatgcggg
gacatccagctcagcatccgctcctacctggaggcgtgcgtgtttattggggacattgag
cgctcgcaaaatttcctggtcagtcagcacagagttatgagtcgacgtaaacatcttacc
acagatgtttacaacattatgatgagggtgtgggccaaaaagggcacgttgaatcagatt
ggtcgtatctttattctgatggaagaagctgatctgaagccaaacgtgggctcctactcg
gctgcactggagtgtatgggccgaaatccaaactgccccccaaaagtaatttcgaggtgt
ctgaatcaaatgaagaaggatgggctgtgtgtggatgatctgttcagggagtgtgttttc
caacaagatgaaagggacatgctgctgaaggcagttcagactgtaaaaccagactacgag
cccagcctcaccctgaacgcaagccagtgttcctcaccacttgtacaggacttctacaca
aatagggagcatcacatttatcccaaacttgacttcactcaggaggagctccagaggtgt
tttcaatgtcagctcagtgtggagcaggcctgcaccatcaccatcgactctgttgaggcg
atgaagcccgtcactgagaacatggttaaaatgagggaactgctggcagaacagcgggca
cagtggcagatggttctcctccaggcactgagggagaacaagatgatcctgaccaaaacc
aacaccagggactacaagcttaacctttatccatatctctgtctgctggaggataaggag
tacgttgacattatgatacagagtgtttctaacctgcctcctagtggggagtccctgaag
attttagctcatgatctgggcaacaggatctataccaagtactgtgtgagacagaagcac
cagaatggcattgtagaaaagctgggaagtatttatgatgcctacacagaactgctggcc
aaagataccaaggtgtgcaatgtccttccaagggagcagtggtgtaaactggagatggag
cagagttcaggacccacgctccagggtgcagagacaagttggccatatgttctaatgctg
gagctgggaaccttcattgtggacataatggtgaagaatcttaaaattaacagtgacatc
ctgaaccccgcctatgacagaaagcgcatccccatcctctaccacatgtataccttccgc
agcaccagacaggttggcttcatcaagccgcaccccatcttgacacagatgcaacaggaa
gccatggagaccacgctgacctttgattcctcagtgatgccgatgctatgccctccggtg
ccgtggacatcggagaagtttggagcctacctgctcaccccggctaaactgatgcgcacc
acacatggggccacgcagcacgaggaactgctggaaaagtgtccgaatctccacccagtt
tttgactcgctcaaccagttgagtaattgtacctggaggatcaacaaacccattctggac
ataatcatctcgatctttaacgaccggggcagtgataagctggacatccctccgcctctg
tcagaagcccctaaaataccccacttcaaccctcaagaccccgcttacacagccagcgag
aaggcacacatgaaacgagaggtgatcaatgctaagaagaagtgtagcgagatgcacagc
ctgcgaatggacgctctttataaactctccattgcccaccacatgcgggacaagctgttc
tggtttccccacaacatggacttcagggggcgcacctacccatgtcctccgtatttcaat
cacttgggaagtgatgtgactcgggcgacgctcatgttcgctgaggggaagcctcttggt
cccaaaggtttggactggctgaagattcacttggtcaacttgacggggttgaagaagagg
agctcactgcagggacgtctggaatacgccgacagcatcatggaggacatcctggactct
gcagacgaccctctgaacggtaaaaaatggtggatggaggccgatgagccatggcaggca
ctggcctgctgcatggagatagccaacgcagtcaggtcacccgatccaactaagtttgtc
tctcactttcctgttcaccaggacggctcctgcaacggtctccagcactatgctgctctt
ggcagagatgttatcggtgcgacttcagtcaacctcatgccctgcgaggtgccccaggat
gtatacagcggcgtagcacagcaggtcgaagagctgcgaactcgggatgctgcaaaaggc
ctgaagatcgcccaggttctggagggcttcatcagcaggaaggtggtcaaacagacggtg
atgactgtggtgtacggagtcactcgttacggagggcgcctgcagatagagaagaggcta
aaggagattgaggagtttcccaaggagcacgtatgggatgcgtcacattaccttgtgcgc
ctggtgttcagtggcctgaaggagatgtttacgggaaccagagagattcaggactggctg
acagaaagtgccaggctcatctccaagtgtggccacactgtggagtgggtgacacccctg
ggtttaccgatcattcagccttatcaccgcacacgcaatttagtgctgaagagtaccatg
caacatataaacctccaaatcagccacgacactaaagagaggcccgacacagtaaaacag
aagaatgcattcccgcccaacttcatccactctctggattccacacacatgatgctgact
tcacttcactgctacagtgccggtctgacattcgtctcggttcatgactgtttctggacc
cacgccctcaccgtggacaccatgaacaagatctgccgggagcagtttgtcgccctgcac
agccagccgattctgcaagggctgtccaacttcctgctgctcaaatactgctccacaatc
cagagggaagccaagaacaagaagtaccaggagtacaggaggttgatgttgctgctggcc
aaagtgccccagacaggtgattttgatctgcagcgggtgaaagagtccacttacttcttc
agctga
DBGET
integrated database retrieval system
