Xiphophorus hellerii (green swordtail): 116726035
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Entry
116726035 CDS
T07363
Name
(RefSeq) guanine nucleotide exchange factor DBS-like isoform X1
KO
K20685
guanine nucleotide exchange factor MCF2
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116726035
Membrane trafficking [BR:
xhe04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
116726035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
Spectrin_5
CRAL_TRIO_2
PH
Spectrin
CRAL_TRIO
PH_10
Phage_cement_3
Motif
Other DBs
NCBI-GeneID:
116726035
NCBI-ProteinID:
XP_032428397
LinkDB
All DBs
Position
9:complement(28482684..28593459)
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AA seq
1236 aa
AA seq
DB search
MSALFLYFQMNSNKTCATENGTNIISCDTSTWRFDEIMQQEIRPLLAVDIIEQLHRQFAL
LSGGRGKDGAPIITFPECSGFNEVPEEDFLNVVTYLTSIPSLDAASIGFIIIIDRRKDKW
SSVKASLSRIAGAFPGNLQLVLVLRPSRFFQRTIADIGIKLHKDDFKMKIVMLNSLSDLH
GYVDKSQLTQEFGGSLEYSHSQWIHHRTAIENFALTVKTTAQMLQRFGSELAETELPNDV
QSTKDLLTAHTDKHNNLKEELRLALRQGSTLFTCIKDQTAKSESHKLKPDEMENQTTVER
LLAQLDETENAFEQFWCKHHLKLEQCLQLRHFEQDFREVKVTLDTRMDSLKSLSDAGDCV
ARVEHLLKELKTLEEKVQPTLEKAQLHAMHGDQLIQSDHYAVDSIRPKCVELRRVCDDFS
NGAKKKSDVLSKSLHVHMGIEKVNQWCESGIYLLASQAVDKCQSQEGAESALTDIENFLE
LAEKNHVTELRNLHNQYEVILSEDVKGRVLKALRRLEDVQEMFEKRRVSLKRLSAKQTRP
IQPVAPRPESSPKRPAPKNPARTPGGQQPLARKLSDNSNSGKQPAEADPNKKKNIRKTKG
IKIEVMHEESQGGSTHVAVSNESEESLSNRRRHIMTELIESERIYVEELQSIMEGYVAEL
NNSGLCHLIPPTLENKQDVLFGNLPEIYDFHNKTFLMELENCAENPELVGTCFLKRKEEL
QVYEKYCQNKPRSEVVWRQCGDSLFFQECQKKLDHKLSLDAYLLKPVQRITKYQLMLKEM
LKCSKGEEMAELEEALATMLDIVKSVNDSMHQIAITGFEGNLSELGKLLMQGSFNVWTDH
KKGHTKVKDLARFKPMQRHLFLYDKMLLFCKKREESTEGHEKTPSYGFKHSLKMSSVGIT
ENVKGDNKKFEVWYNGREEVYIIQAPSMDVKNMWVSEIRKVLTGQLEACREASQNNNYGV
PMRNVRRMGLRQSDSSSPESGFRRANPSPNMRQKKADASAHSAVNARKHFTLQGLSNRRS
LPAEPTVKEAEVTRRFSLTSSLASSSSAMRRTKGPLSASIKSKRHEIKSDPTPFGYEDTL
CGAMAAHGKQQSMTSSIAGGTGSKAAVPRSTSQPGWTQRRLLSMDTEDFETIPSSGEESS
NSSEDEVNNKNGGSSRYRVQLTYASCEAKDLQFLEEGENGNWLIKNLLTEGPRLVLFSTL
QTPSKGDIFSDLCTAALSESEENNVSTWEDVSQDCK
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccttgtttctctacttccagatgaattctaataagacctgtgctactgaaaac
ggaacaaacattatatcatgtgatacatctacctggagatttgatgaaatcatgcaacag
gagatcaggcccctgctggctgtggacatcatagagcagcttcatcggcagtttgcctta
ctttcaggagggcgaggaaaggacggtgcccccatcatcactttcccagagtgctcaggc
ttcaatgaagtgccagaggaagatttccttaatgtagtcacctatctgaccagcataccc
agcttggatgctgccagtatcggctttatcatcatcatcgatcgacgtaaggataaatgg
agttcagtgaaggcctctctatcccggattgctggagcatttccaggaaacctccagttg
gtgttggtgctgagaccttccagattctttcagaggacaatagctgatattggaataaag
ctccacaaggatgactttaaaatgaagattgttatgctgaactctctgtcagatcttcat
gggtatgtggataaaagccagctgacccaggagtttggaggaagtcttgagtactctcac
agtcagtggatacaccacagaactgccatagaaaactttgccttgacagtgaaaactaca
gcgcagatgctacagaggtttgggtcggagctggcagagacggagcttcccaatgacgtc
cagagcaccaaagacctgctcacagcgcacactgacaaacacaataacctcaaggaggag
ctgaggctagctttaagacaaggcagcaccttgtttacctgcatcaaggaccagacagcc
aaatcggagagccacaaactcaaacctgacgagatggagaaccagacaacggtagaaaga
ctcctggcccagcttgatgagacagagaatgctttcgaacagttctggtgtaagcatcat
ctgaagctggagcagtgcctgcagctgcgccattttgaacaggatttcagagaggttaaa
gtgactctggacacacggatggactcccttaaaagcctttctgatgctggagattgtgtg
gccagagtggaacatctgctaaaggagctcaaaacacttgaggaaaaggttcagcccaca
ctagaaaaggcccagctccatgccatgcacggtgaccagctcatccaaagtgaccactac
gccgtggactccatccggccaaagtgtgtggagctccggcgggtctgcgatgatttcagc
aacggagccaagaagaagtctgatgtcttgtctaagtctttgcatgtacacatgggtatt
gagaaggttaaccagtggtgtgagtctggcatctacctactggcttcccaagctgtggat
aagtgtcagtcacaggaaggggcagaatcagctttaacagacattgaaaacttcttggag
ttggcagaaaagaaccacgtgacagaactgaggaacctccacaaccagtatgaggttatc
ctgtcagaggatgtaaagggcagggtcctgaaagcactcaggcgactggaggatgttcaa
gagatgtttgagaagcgacgtgttagcctgaagaggctgtcagccaaacagaccagaccc
attcagccggtggccccacggcctgagtcgtctcctaaacgccccgcaccaaagaaccct
gccaggactcctgggggccaacagcccttggctagaaagctctctgataactcaaacagt
ggcaagcagccagctgaagcagatcctaacaagaagaagaacatacgcaagaccaagggc
atcaagattgaggtgatgcatgaggaaagccagggaggctccacccatgttgctgtatca
aacgagagtgaggagagcctgtccaatagacgcagacacataatgacagagctgattgaa
tcagaaagaatttatgtggaggaattacagagcatcatggagggctatgttgctgagctg
aataactcggggctctgccatctcatcccccccacgctagagaataagcaagatgtgctg
tttggcaacctgccagaaatatatgattttcataacaaaacattcctcatggagctggag
aactgtgcagagaatccagaactggttggaacctgttttctgaagaggaaagaagagctt
caggtgtatgagaagtactgccagaataaaccccgctctgaggtggtgtggcggcagtgt
ggagacagcctcttctttcaggagtgtcagaagaaactggaccataaactgtccctggat
gcctacctgctgaagcctgtacagaggatcaccaaataccagcttatgcttaaggaaatg
ttaaaatgcagtaagggagaggagatggctgagctggaggaggccttagctaccatgctg
gacattgtcaagtctgtcaatgactccatgcatcaaatagccatcactggatttgagggc
aacctgagtgaactggggaagctgctgatgcagggatcctttaatgtgtggacagaccat
aaaaaaggccataccaaggtgaaggacctggccaggtttaagcccatgcagaggcacctc
ttcctgtatgataaaatgctactgttctgtaagaaacgggaggagagcactgagggacat
gagaagaccccatcctacggctttaagcactcgctaaagatgagctcggtggggataaca
gaaaatgtcaaaggggacaacaaaaagtttgaggtgtggtacaatggcagagaagaagtt
tacataatccaggctccctccatggatgtgaagaatatgtgggtgtcagagatccgtaaa
gttcttacaggccagctagaagcatgcagagaggccagccagaacaataactatggagtc
ccaatgaggaatgtccggaggatgggcctgagacagtcagattcatctagtccagagtca
ggattcaggagagctaacccgagtcccaacatgaggcagaaaaaagctgatgcttcagcc
cactcagctgttaacgctcggaagcatttcaccttgcagggactttccaacagaaggtct
cttccagcagaacccacagtaaaagaggcagaggtcacgcgacgcttctctctcacttcc
tctcttgcctcctcttcctctgccatgcgacgcaccaaaggtcccctctctgctagcatt
aagagcaagagacacgagataaagagtgatcccactccatttggctatgaagatacgcta
tgtggtgcaatggctgcacacgggaaacagcaaagcatgaccagcagcatcgctggtggt
actggtagcaaagcagccgtccccagatcaacctcacagccaggctggacccagagacgt
ctcctctccatggacacagaggactttgagacaattccgtccagtggagaggagtcctcc
aactcttctgaggatgaagtcaacaataaaaatggtggcagcagccggtaccgggtgcag
ctgacatatgcgtcatgtgaagcaaaagacctccagtttctggaggaaggagaaaatgga
aactggctaatcaagaaccttttaacagaggggccaaggctggtccttttctctacactt
caaacaccatctaaaggagatatcttcagtgatctgtgtacagcagcactctctgagtct
gaagaaaacaacgtcagtacttgggaagatgtatctcaggactgcaaataa
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