KEGG   Xiphophorus hellerii (green swordtail): 116726038
Entry
116726038         CDS       T07363                                 
Symbol
kdm4a
Name
(RefSeq) lysine-specific demethylase 4A isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
xhe  Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xhe03036]
    116726038 (kdm4a)
Enzymes [BR:xhe01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     116726038 (kdm4a)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     116726038 (kdm4a)
Chromosome and associated proteins [BR:xhe03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    116726038 (kdm4a)
SSDB
Motif
Pfam: JmjC Tudor_2 zf-HC5HC2H_2 PHD_2 zf-HC5HC2H JmjN PHD Tudor_5 PHD_5 DUF4537
Other DBs
NCBI-GeneID: 116726038
NCBI-ProteinID: XP_032428407
LinkDB
Position
9:complement(29450603..29478189)
AA seq 1031 aa
MTTDTPDQTPNFRVMTFTPSKEEFKDFVRYVAFMESQGAHRAGIAKIIPPKGWKPRHTYD
DNDDLLIPAPIQQVVTGQSGLFTQYNIQKKPMTVVEFQKTSNLAKFCSPRYVDFDELERK
FWKNLTFNPPLYGADVSGTLFDPDVSEWNMAHLNTILDTVESESAVKIKGLTTPCLYFGM
WKSAFPWHTEDMNLYSICYLHYGEPKSWYVVPPEHGRRLERLAKGFFPGNAQSCEAFLRH
KMTLISPSILKKYGIPYEKVTQEAGQFIVTFPFAYHAGFNHGFNCAESTNFATQRWIDYG
KQAKLCSCRQDMVKISMDAFVRKFQPDRYKLWKAGKDDTPIDHVKPTPEAAEFLKKEKAS
PCKKVSSEASSEEPTSPAQKDKSSDLQSGKKRPLEPVQTSEGDNCDVRVKEAVEPESPKL
SMKSSPNKVPAPSAQPKSERQLEKHMKPPPKCISKANKKTSNRLISARKDKSGGRAADMS
PLLPVEGNAEGSVEPRVETSNIPVHKLFQRTLSPADVLHVHSYAKGDYGEEILVQEEEQA
IRSDKKEDTKHQVAEVLPPDAELESNPDQLPRPPHIKDNSSEKDVLEELPPVEAGTFEGD
NWAKPLTHLWQSSPPNLKKEREYNQRMGSKPPYCSICMLFQTYQQAECARSVDSHVAGAG
GRMQTKPLIPEMCFTITTEEDAESEEQPVAHYLEEDGTSLLISCSQCSVWVHASCYGVNP
ASVITEWKCARCKANAMNESCCLCLLRGGALHKTTNDKWVHVLCAVAVMEARFVNIAERS
PVDLSGIPLQRFKLKCYYCKKRVKKASGCCVQCSHGRCPTAYHPTCAQAAGVLMQPDDWP
FVVHVTCCRHKGPAQIERNKAAMHELTVGQKVICKHKNGRYYQCDVVQLSKETFYEVNFD
DGSFSDNLFPEDIVNQDCAQLGPPPQGEVVQVRWTDGLVYGAKFVAAHVIQMYLVEFEDG
SQLTAKRDDVYTLDEELPKRVKSRLSKASDMRFDGIFEDNEIIQESKRQRVINSRYRGDY
IEPVIYRAIME
NT seq 3096 nt   +upstreamnt  +downstreamnt
atgactacggacactccagaccaaactcctaatttcagggtaatgacattcaccccctcc
aaagaagagttcaaggactttgttcggtatgttgccttcatggagtcacaaggagctcac
agagctggaattgccaaaatcattccacctaaaggctggaaaccaagacatacatatgat
gacaacgatgatctgctgattcctgctccaatacagcaggtggtcactggccagtcagga
ttgttcacgcagtacaacatccagaagaaaccaatgactgtcgttgagtttcagaagacc
tctaatttggccaagttttgcagtcccagatatgtggattttgatgagctggaaaggaag
ttttggaagaacctgacctttaaccccccactgtatggagctgatgtcagtggaacactg
tttgatccagatgtgtctgaatggaacatggcccatcttaacacaatcctggacactgtg
gagagtgagagtgcagtgaagataaaaggacttaccaccccttgcctttattttgggatg
tggaagagtgcttttccttggcacacagaggacatgaatctttacagcatttgctacctg
cactacggcgagcccaagtcatggtatgttgtcccaccagagcatggcagaagactggag
cggcttgctaaaggtttctttcctgggaatgctcagagctgtgaagccttcttgcggcac
aagatgactttaatttcaccctcaatcctcaaaaaatatggtataccatatgagaaggtc
actcaggaagctgggcagttcattgtgacttttccatttgcttatcatgctggtttcaac
cacggtttcaattgtgctgagtccaccaactttgctacacagcgatggattgattatgga
aaacaagctaaattgtgttcttgccgtcaagatatggtgaagatatctatggatgcattt
gtacgcaagtttcagcctgaccgttacaaactgtggaaagcagggaaagatgatactccc
attgaccatgtgaaaccaactccagaggctgctgagtttctcaaaaaagaaaaggccagt
ccctgtaagaaggtttccagtgaagcatcgtctgaggagccaacgtctcctgcacagaag
gacaaaagctcagatcttcaaagtgggaaaaaacgtccgcttgaacctgtccagacctct
gaaggagacaattgtgatgtaagagtcaaggaggcggtggagcctgagagtcccaagcta
tcaatgaagagttctcccaacaaagtcccagctccctcagcacaacccaagtcagaacgt
cagttggagaagcacatgaaaccaccacctaaatgcatttctaaagccaacaagaaaact
tcaaacagactaatttctgcaagaaaggacaagagcggtggacgggctgcagacatgagt
cctctgctgccagtagaaggaaatgcagagggcagtgtggagcctcgggtggaaaccagt
aacatccctgtgcacaagctgtttcagagaacactcagccctgctgacgtcctgcatgtt
catagctatgccaaaggagactatggagaagaaatcctggtgcaggaggaagaacaggcc
atacgcagtgataagaaagaagacaccaaacatcaagtggcagaagtgttgcctcctgat
gcagagctggaaagtaatccagatcagctgccacggcccccacacatcaaagataacagc
agtgaaaaagacgtcttagaggagcttcccccagtggaggcaggtacttttgaaggggac
aactgggccaaacctctgacccatttgtggcagagtagccctcccaatctgaagaaagaa
agggagtacaaccagcgcatgggctctaagcctccatactgctccatctgtatgctcttc
caaacatatcaacaggcagagtgtgccagaagcgtggacagtcatgtcgctggtgcaggt
gggaggatgcagaccaagcctcttatcccagaaatgtgtttcaccatcaccacagaagaa
gacgcagagagtgaagaacaacccgttgcacattatttagaggaagatggaaccagcctc
ctcatcagctgctcacagtgcagtgtttgggttcacgccagctgctacggtgtgaaccca
gccagtgtgatcaccgagtggaaatgtgcacgatgtaaggccaatgctatgaatgagagt
tgctgtctgtgtttgctaagaggtggagccctacataaaaccaccaatgataagtgggta
catgtgttgtgtgctgtggcagtaatggaggcgcgctttgtcaacattgctgaaagaagt
cctgtggatctgagtggaatccctctacagagatttaaactgaaatgttactactgcaag
aaacgcgtgaaaaaggcatctggctgctgtgtgcagtgctctcatggccgctgtcccact
gcataccaccctacctgcgcccaggctgctggggtactgatgcagccagatgattggccc
tttgtggtccatgtgacctgctgtcggcacaaaggtcctgctcagattgagcgcaataag
gcagcaatgcatgagcttactgtgggtcagaaagtcatctgtaagcacaagaatggccgt
tactatcagtgtgatgtagttcagctctcaaaagagaccttttatgaagtcaactttgat
gacggctccttcagtgataacctgttcccggaggacattgtgaatcaagactgcgctcaa
cttggccccccaccgcagggtgaagtggttcaggtgcgctggacagatggactggtctac
ggggccaagtttgtggcagctcatgttattcaaatgtacttggtggaatttgaagatggc
tcacagctaacagccaagagagatgatgtctacactctggacgaagaacttcccaagaga
gtcaaatccagactgtctaaggcatcagatatgaggtttgatggaatttttgaagacaat
gagattatccaagaatccaagagacaaagagtgatcaactcccggtacaggggcgactac
attgagcctgtgatttacagagccatcatggagtag

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