Xiphophorus hellerii (green swordtail): 116726054
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Entry
116726054 CDS
T07363
Symbol
hes4
Name
(RefSeq) transcription factor HES-4 isoform X1
KO
K06054
hairy and enhancer of split 1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03460
Fanconi anemia pathway
xhe04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
116726054 (hes4)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
116726054 (hes4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116726054 (hes4)
03400 DNA repair and recombination proteins [BR:
xhe03400
]
116726054 (hes4)
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
116726054 (hes4)
DNA repair and recombination proteins [BR:
xhe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
116726054 (hes4)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
Spectrin_1st_PEPL
Motif
Other DBs
NCBI-GeneID:
116726054
NCBI-ProteinID:
XP_032428450
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All DBs
Position
1:13571309..13573251
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AA seq
288 aa
AA seq
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MPADTMEKQTASPIAGAPANGSHTPDKPKNASEHRKSSKPIMEKRRRARINESLSQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNLQRMQMSAALSADATVMSKYRAGFNECMNE
VTRFLSTSEGVNAEVRSRLLGHLSSCMGQMMSVTYPQQAPSQPAHLAQPLHVQLPPTLPI
SSKLNPAEPASPKVFGGFQLVPATDGQFAFLIPNPPFASAATTSPVIPLFSNAGVPIAVN
ASPVHGSSAPTAASPVHGMTSFSGVSQVVSPVGVNAGAESSEAVWRPW
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgacactatggaaaagcagacggcgtctcccatcgccggagctcctgccaac
ggatcacacacaccggacaagccaaaaaatgccagcgagcacagaaagtcatctaaaccc
attatggaaaaacgacggagggcgagaataaacgaaagcctttcgcagctaaagactctc
atcctggacgcacttaagaaagatagctccaggcactccaaactggaaaaggcagacatc
ctggagatgacggtgaagcacttgaggaacctgcagcgcatgcagatgagcgcagcgctc
tcagcagatgcgacagtgatgagcaaatacagagccggattcaacgagtgcatgaacgag
gtgacccgcttcctgtccacttcagagggggtgaacgccgaggtgaggtcgcggctcctc
ggccatctgtccagctgcatgggtcagatgatgtccgtcacgtacccgcagcaggctccg
tcccagccggcgcacctggcccagcccctccatgtgcagctcccgcccaccctgcccatc
agctccaagctcaatcccgcagagcccgcctctcccaaggtgttcggcgggttccagctg
gttcccgcaacagacggacagttcgcctttctgatccccaacccgcccttcgcctccgcc
gccaccacctctcctgttatccccctcttctccaacgccggggtgcctatcgcggtgaac
gccagtccggtgcacggcagctccgcgcccacggcagcgtctccagtgcacgggatgacg
tccttctccggggtgtcccaggtggtcagcccggtgggggtgaacgccggcgcggagagc
agtgaagcggtgtggcggccttggtag
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