Xiphophorus hellerii (green swordtail): 116726058
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Entry
116726058 CDS
T07363
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03030
DNA replication
xhe03410
Base excision repair
xhe03420
Nucleotide excision repair
xhe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
116726058 (rfc4)
03410 Base excision repair
116726058 (rfc4)
03420 Nucleotide excision repair
116726058 (rfc4)
03430 Mismatch repair
116726058 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xhe03032
]
116726058 (rfc4)
03036 Chromosome and associated proteins [BR:
xhe03036
]
116726058 (rfc4)
03400 DNA repair and recombination proteins [BR:
xhe03400
]
116726058 (rfc4)
DNA replication proteins [BR:
xhe03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
116726058 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
116726058 (rfc4)
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
116726058 (rfc4)
DNA repair and recombination proteins [BR:
xhe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
116726058 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
116726058 (rfc4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
AAA_lid_RFC1
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_assoc_2
AAA_22
AAA_16
AAA_30
AAA_11
DUF815
Mg_chelatase
SLFN-g3_helicase
AAA_19
Gp44_lid
RuvB_N
AAA_14
Cdc6_lid
AAA_24
AAA_28
AAA_5
wHTH-PRTase_assc
ResIII
AAA_7
DNAX_ATPase_lid
Kinesin
Motif
Other DBs
NCBI-GeneID:
116726058
NCBI-ProteinID:
XP_032428453
LinkDB
All DBs
Position
9:28620565..28640236
Genome browser
AA seq
357 aa
AA seq
DB search
MQAFLKGATIQSSRPQKDKVTAGPSAEKKAKAVPWVEKYRPKCVDEVAFQDEVVAVLKKS
LEGADLPNLLFYGPPGTGKTSTILAAARELYGPELYRQRVLELNASDERGIQVIREKVKN
FAQLTVAGTRPDGKPCPPFKIIILDEADSMTAPAQAALRRTMEKESRSTRFCLICNYISR
IIEPLTSRCSKFRFKPLASQIQKERLLEICDKEKLKYTKESIAALVQLSEGDLRKAITFL
QSAARLNADKEITDQAIIEIVGVVPSKMIDNLLQICFRGTFEKLEVAVRNMVNEGYAATQ
ILSQLHDCILEKDITDKQKSAISEKMAVVGKCLADGADEYLQMLSLCSVIMQQAGQS
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccttcctgaaaggagcaactatccagagcagcagaccacagaaggataaggtg
acagcgggacccagtgctgagaagaaggcgaaggctgtaccctgggtggagaaatacaga
cccaaatgtgttgatgaggtggccttccaggacgaggtggtcgcagtgctgaagaagtca
ctggaaggagcagatcttccaaaccttctcttctatggtcctcctggaacaggaaagact
tccaccatcctagctgctgccagagaactttatgggccagagctgtatcgacagagggtg
ctggagctgaatgcttcggatgaacgaggaatccaggtcatcagggagaaagtgaagaac
ttcgctcagctcactgtggctgggactcgtccagacggaaagccatgtcctccttttaag
attatcatcctggacgaggcagattccatgacggctccagcccaagctgctctcaggcgg
accatggagaaggagtcccgctccacccgcttttgcctcatctgtaactacatcagcagg
attattgagcctcttacctccagatgttccaagtttcgtttcaaacctctggccagtcag
atccaaaaagaacgtctgctggaaatctgtgataaggagaagctcaagtacacgaaagag
agcatcgcagcgttggtgcagctttctgagggggatctgaggaaagccatcacgtttctt
cagagcgcagcacgtctcaacgctgacaaggaaatcactgaccaagctataattgagata
gtgggggtcgttccttccaaaatgattgataatttgctccaaatctgcttcagaggaacg
tttgagaaactagaggtcgcagtgaggaacatggtgaatgaaggatatgcagccacacag
atcctgagtcagctccatgactgcatcttggaaaaggacattactgacaagcaaaagtca
gccatctctgaaaagatggcggttgtaggaaagtgccttgctgatggtgcagatgaatac
ctgcagatgctgagtttgtgttcggtgatcatgcagcaggctggtcagagctaa
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