Xiphophorus hellerii (green swordtail): 116726189
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Entry
116726189 CDS
T07363
Name
(RefSeq) desmoglein-2-like
KO
K07597
desmoglein 2
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116726189
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xhe04515
]
116726189
Cell adhesion molecules [BR:
xhe04515
]
Cadherins
Major cadherins
116726189
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Fibulin_C
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
116726189
NCBI-ProteinID:
XP_032428684
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Position
9:33037081..33060026
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AA seq
1154 aa
AA seq
DB search
MIRLARSSLVLFLFGIQAIVVVRTHLLRHKREWVLPPVPLTENQDYTQKEFIAKIRSDRQ
IGTNVIYSLEGVGANQYPFHVFVVDPLNGNVRVTRKLDREDIPLYKLAGFAKFPNGTEAE
AKIDLQIKVVDENDNTPTFESSVLTAEVDELTPKGTSVITISATDKDDNTTDHAKIAYFI
KHQEPRDYFTMTKDGIISVNNVLDREKEKTVLLTVTGQDMYGASGGHIATATVTINIRDV
NDNPPTLEKEAYEGDIEENTSGVEVMRIKAQDLDIDIDNWEAVFEIIQGNEDGYFSIKTD
PVTNEGILFLEKPVDFEDVKDMNLALAVRNKAPLVDGSGSAGGANIGFGGGAGGAGGAGG
AGGSSGASGSSGASGSGATGASGASGASGASGASGAGGAWGSKFKTYPIKINVKNQPEGP
HFEPKVKSIPIKEGTPIDVNKVIARYPAIDKDTGKPAEDVKYLKGSDPQNWLSIDPKTAE
IKLNKVPDRESPFLVNGMYMAEILCITEGMPSKTATGTVAIQVEDLNDHCPELTSNFMPV
CKSNKRIIVNAKDEDAFPNGPPFKFSILPGSTTVDWKMMPYNDTAVVLTTSDDVRPAHSD
LMLVVEDQQKLSCPKPQKLTVFFCDCTEIDDCSNKEAIKRIGSKPALGPAGIGLLFLGVL
AILLIPFLMILVQCGNPSAYSDMFAKMPYETKQHLIAYDIEGQGELMESAFKNRPLQSQK
SDVDFVQMVQSSGFGMEQSVASMYQGASSEYRDGLLGMSHWEKSGSHFESEGGQSRGGAA
TECFNGMSLPDSYLRGYYNNKLASGDEKIVQKDHMLVFDYEGTGSSAGSVGCCSNFQQDY
DLEFLDNLGPSFKTLAEICGGKKVQTETTKVDTPLPNPSVNNIQVSVPKLVTRQEMSLPS
KVQPAKSTTEQTLISKTSKTTEHAKIRESKATVREGMTSVQTGKAQNQMLVLNQQQPVYF
TTAPMLQPIQYVVQQPLQNAMILAETPGPNIQHMVMVNGTDFGSSQGVIVQGQTMMPSAQ
PQSLGAVLVDSNGIQGTTGNMVHSGNFSGAQNMMVVEGQVPVGTVKVLNGNEARLIQGGT
MLNDLSGYQTMLKIGESSSIGQQLQDGRGVFQTAEVAGVQNLHDLSAGESSCSKSRTSSN
TLSTTRTIHKTVVQ
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgattcgactggcccggtcatcattggtgttatttttgtttgggattcaggctattgtt
gtggtaagaactcatctgttgcgacataaaagagagtgggttctccctccagtacctttg
acggaaaatcaagactacactcaaaaggaatttattgccaagatccgatcagaccgacag
attggaacaaatgttatttactccttagagggtgtcggggcaaaccagtatccttttcat
gtgttcgtggttgaccctcttaatggaaatgttcgagtgaccagaaagcttgacagggag
gacattcccctatacaaacttgctggttttgctaaattcccaaatggcactgaagcagag
gcaaaaattgacctgcaaattaaggtcgtagatgagaatgacaacactccgacatttgag
tcatcggtgctgacagctgaggtggatgagcttactcctaaagggacttcagttatcaca
attagtgccactgataaagatgataacacgacggatcatgctaagatcgcctacttcatc
aaacaccaggaacctcgtgattatttcaccatgaccaaagatggcataatctctgtcaac
aatgtcttggacagagaaaaagaaaaaacagtcctgctgacagtgactggccaagatatg
tatggtgcatcagggggacacattgcaacagccactgtcactatcaacattcgggatgtg
aatgacaaccccccaactttggaaaaagaagcatatgaaggagacattgaagagaacaca
tcaggtgttgaagtgatgaggatcaaagcacaggatctggacattgatattgacaactgg
gaagctgtttttgaaatcatccaaggcaatgaagatggatatttcagcataaaaactgat
cccgtcaccaacgagggcatcctgtttcttgaaaagcctgttgactttgaggatgtaaaa
gacatgaatctggcactagcagtgaggaacaaagctccactggttgatggatctggttca
gctggtggagctaatataggttttggaggaggagccggtggtgccggcggtgccggtggt
gccggtgggtccagcggtgccagtgggtccagcggtgccagtggcagtggtgccactggt
gccagtggtgccagtggtgccagtggtgccagtggtgctagcggggctggtggtgcctgg
ggtagcaaatttaaaacctatccaataaaaatcaatgtaaaaaaccaaccagaaggacca
cattttgaacccaaagtcaaatctatccccatcaaggagggaacacccatcgacgtgaat
aaagtgattgccagatatcctgcaatcgataaagatactgggaaaccagcagaggatgtc
aaatatttaaaaggctcagaccctcagaactggctcagcattgaccccaagacagctgaa
atcaaactgaacaaggtgcctgacagggaatccccattcctggtcaatgggatgtacatg
gctgaaatactctgcatcaccgaaggaatgccaagtaaaacagcgactggcacggtagcc
atccaggtggaggatctcaatgaccactgccctgagctgaccagtaacttcatgcctgtg
tgcaaatccaacaagaggatcattgttaatgccaaagatgaagatgcatttcctaatggc
ccaccttttaagttttccattctccctgggagcacaacagtagattggaaaatgatgcct
tataatgatactgcagtagttctgacgacatctgatgatgtgcggcctgcccacagcgat
ctgatgcttgtggtggaagaccaacagaaactctcctgtccaaaaccacaaaaactgaca
gtctttttctgtgactgtacggaaatagatgactgttcaaacaaagaagccattaaacgg
atcgggtcaaaaccagcattaggacctgcaggcattggacttctttttctgggagttttg
gccatactacttattccctttttgatgatactggtccagtgtgggaatccgtcagcctat
agcgacatgtttgctaagatgccttatgaaacaaaacaacatctcattgcatacgacatt
gagggccaaggagaactaatggaaagtgcgttcaaaaatcgtcctttacaaagtcaaaaa
tctgacgttgactttgtacaaatggtacaaagttcaggttttggaatggagcagtctgtt
gcttccatgtaccaaggtgcttcaagtgagtacagagacggactgttggggatgtctcat
tgggagaaaagtggctctcactttgagtctgaaggcggacagtcaagaggaggagctgca
acagaatgtttcaatggcatgtcgttgccagacagctacctgagaggatactacaacaac
aagcttgctagtggagatgagaagattgtgcaaaaagatcacatgttggtgtttgactat
gaaggcactggctcctctgctggctccgttggctgctgcagcaattttcaacaagactat
gacctggagttccttgataatcttggaccaagctttaaaacacttgctgagatatgtgga
ggtaaaaaagtccaaactgagacaacaaaggtggacactcctctacctaatccttctgta
aataacattcaagtgtcagtaccaaagttggtgacaagacaagagatgtccttgccatcc
aaagtgcagccagctaagtccacaactgagcagactttaatcagtaaaactagtaaaaca
actgagcatgctaaaataagggagagcaaggccacagtgagggaagggatgacctcagtg
caaacagggaaggcacagaaccagatgctagttttaaaccaacaacaacctgtctatttc
accactgcgcccatgttgcagcccatacaatatgttgttcagcagccacttcagaatgcc
atgatactagctgaaacacctggccctaacattcagcacatggtaatggttaatggcact
gactttggctcttcccagggagttattgttcaaggccaaacaatgatgcctagtgcccaa
ccccagagccttggggcagttctggtggacagcaatgggatccaaggaaccactggcaac
atggtccactcaggaaacttctctggcgcccaaaatatgatggttgttgaaggccaggtc
cccgtaggaacagtgaaagtattaaatgggaatgaggctaggctcattcaaggtggtaca
atgctaaatgacctgtcaggatatcagacaatgctgaagattggggagtcaagcagcata
gggcagcagcttcaggatggaagaggtgtcttccaaacagctgaagtcgctggggttcaa
aaccttcatgacctcagtgctggggagtccagttgctctaagagtcgcacctcttccaac
acactcagtacaacccgtactattcataaaactgttgtgcaatag
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