Xiphophorus hellerii (green swordtail): 116726190
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Entry
116726190 CDS
T07363
Name
(RefSeq) LOW QUALITY PROTEIN: desmoglein-2-like
KO
K07597
desmoglein 2
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04382
Cornified envelope formation
xhe04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116726190
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
116726190
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xhe04515
]
116726190
Cell adhesion molecules [BR:
xhe04515
]
Cadherins
Major cadherins
116726190
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
Cadherin_2
Fibulin_C
OMP_b-brl
Motif
Other DBs
NCBI-GeneID:
116726190
NCBI-ProteinID:
XP_032428685
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Position
9:33070558..33099838
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AA seq
802 aa
AA seq
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MAALFSPEVRLILFTVLFLMISADAKEKGLKTLKRAKREWILPPAKLKENHNYTHLEFIA
KIRSDRDKQWKVEYSLTGAGADKPPFNLFVVDHNTGFIRITDILDREKYPSYNLTGIAKF
KDGNSAEENIPLTVTVLDENDNSPYFVLHKGNVTEASTEGTFVMQIEGKDDDEAGTINSE
IAYTIISQEPAGKGHMFTIDKKTGKLFVKEPTLDRETYDFYKLVVKGTDMGGAPSGKTGT
GTVEIKVTDINDNIPTLEKSEYAGSVDENVADVVVMRIKALDKDLPHTKNWLTVFTIAQG
NEDNLFSIETDKETNEGILKLIKPVDFEEVQNLELGLIIENVAPFVEGGPIKMDVDVQVG
EGGPLAAGAAAGAGAGAGAGAGVGVGAGVDLGVDLGLDVGLDADLGVDAGLDAGLDVGLD
VGLDAGLDAGLDAGLDAGLKPQGGAGPGVGLKPAVGPGVGVGLKPGIKPGLKPGPRPGSK
PKPKAPGKSYPIKIAVNNVPEGPAFRPDTKKVPVSEDPNEAPADGVITSFPAVDPDTGKV
ADDVSYAKAYDPDNWFTVDEQTAEIKLNKQPDRESPFLVNGTYIAKILAISKDMPAKTAT
GTIAIQVTDSNDHCPTLTTTYTNLCSDKKTVYVTAFDEDVSPNAAPFTFQIIPEGTRGNW
EIEVINDTTAALHSAKALWPGRYELQVEVKDAQGLSCKEERVFTVDVCTCVGKEDCRSKA
SXGEARSSDFXRRAIGPIVTALFLLMLIPLLLVFCQCGGANTIFSEQFSDLPFDTKEHLI
NYQTECIGEDKVCWNHLLIHVK
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggctgcactgttttctccagaagtgaggctgatcctcttcacagtgctgttcttgatg
atcagtgctgatgcaaaagagaaaggcttaaaaacactgaaaagagcaaaaagagaatgg
atccttcctcctgccaagctgaaggagaaccataactacacccatctggaattcattgca
aagatccgctctgacagagataaacagtggaaggtggaatactccctgacaggagcagga
gctgacaaaccccctttcaatctgtttgtggtggatcacaacacgggatttatacgaata
actgatattctggacagggaaaaatatccttcatacaatctaacaggcattgctaaattc
aaggatggaaattcagcggaggaaaacattcccctgactgttactgtactggatgaaaat
gataattccccttattttgttctccacaaaggcaatgtcacagaggcaagcacagaagga
acatttgttatgcaaatcgaaggtaaggatgatgatgaggctggaacaataaattcagag
atcgcctacaccattatcagtcaagaaccggctggcaaaggtcacatgttcactatagac
aaaaagacagggaaattatttgttaaagagcccactctggacagagagacatatgatttc
tacaagctcgttgttaaaggaactgatatgggaggtgcaccatcagggaaaacagggaca
ggaactgtggaaatcaaagtcacagatatcaatgacaacatccccactctagaaaaatca
gagtacgccggctctgtggatgaaaatgttgctgatgttgttgtgatgagaatcaaagct
ttggacaaagaccttccacacacaaagaactggctgactgtatttaccattgcccaagga
aatgaggataacctgttttccattgaaacggacaaagaaaccaacgagggtatcctaaag
ctgatcaagccagtggattttgaagaagtacagaatcttgagctgggccttatcattgaa
aatgtagctccttttgtagaaggtggcccaataaaaatggatgtggatgttcaggttgga
gaggggggtcctctggctgctggagcagctgctggagccggagccggagccggagccgga
gctggagtcggagttggagctggtgtggatttaggagtagacctcgggctagatgtgggc
ttggatgctgatctaggtgtagatgcaggtctggatgcaggactggatgtaggtctggat
gtaggtctggatgcaggtctggatgcaggactggatgcaggactggatgcaggacttaaa
ccacagggaggagctgggcctggagttggacttaagcctgctgttggacctggagttggt
gtggggcttaagccaggtattaaacccggtctcaagccagggccaagaccaggatccaag
cctaagccaaaagcaccaggaaaaagctatcctataaaaatagctgtaaataatgtgcca
gagggtccagcatttagacccgacaccaagaaagtacctgtatctgaggatccaaatgag
gcaccagcagacggtgtgattacttcgttcccagcagttgatccagatactggaaaagta
gctgatgatgtcagctatgccaaagcttatgatccagataactggtttactgttgatgaa
cagacagcggaaattaaactcaacaaacaaccagaccgagagtcacccttcttagtgaat
ggtacctatattgccaaaattttggcaatatcaaaagacatgccagcaaagacagccact
ggaacaatagccattcaagtcactgactccaatgaccactgtcccactttgaccactact
tacaccaatctatgctctgataagaagactgtgtatgttactgcatttgatgaagatgtc
agtccaaatgctgctccattcacttttcaaattataccagaaggtactcgaggcaattgg
gaaatagaagtcatcaatgatacaacagctgctcttcattcagccaaagcactgtggcct
ggcagatatgaactgcaagtagaggtgaaagatgctcagggtctgtcctgcaaagaggaa
cgggtgtttactgtggatgtctgtacctgtgtgggaaaagaagactgcagatcaaaggca
tcgnagggagaagcccgttcatctgactttnctagacgtgccattggtccaatcgtaaca
gctttgttcttattgatgttgatccctctgctgctggtgttttgtcagtgtggaggggca
aacaccatcttctcagaacagtttagtgatctgccatttgacactaaagagcacctaata
aactaccaaactgaatgcataggagaggataaggtgtgttggaaccatttactaatccat
gtaaagtga
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