Xiphophorus hellerii (green swordtail): 116726314
Help
Entry
116726314 CDS
T07363
Name
(RefSeq) sortilin-like
KO
K12388
sortilin
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
116726314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
116726314
NCBI-ProteinID:
XP_032428875
LinkDB
All DBs
Position
1:14336390..14354019
Genome browser
AA seq
822 aa
AA seq
DB search
MGLLLHCLLLLAVCALPAGGLDFQPGSKALGQPVFVRRSVERRAAQIAKRSLPSWLGASH
HHRIRRRSVDQGESCKKHEGYQSKLKDNTHSYTLNDLSGSVSLAWVGDGTGVILALTTFQ
VPIFLLKFGQSKLYRSEDYGKSFEDVTNLINNTFISAEFGIAIGPENSGKVILTAEISGG
DGYRIFASSDFGKTFAHLNLPFNPMMQISYNPENSNVLAVLSMRNELWLSEDFGRNWKKI
SDMVCLFKWGRKNTIFFTSSQNGSCSDRGMLQLKRTTDLGKTIKTVASKIFSFGLGGRFL
FASVMTGKGTMRMIHVSVDQGENWNMAQLPPVGHEQFYSILAANDDMVFMHVDEPGDTGF
GTIYVSDDRGTVYSKSLERHLYTTTGGDTDFTNVTSLRGVFITSVLAEDTSVQSVVSFDQ
GGEWVPLQRPANTKCDATAKDPDKCSLHIHAAYSIAMKLDVPMPPLTEPNAVGLIIAHGS
VGDAISVMKSDVYVSDDGGYTWIKALNGPHHYAMLDSGGLLVAVEDNGKPINKIKFSTDE
GQCWSIYEFTKEPISFTGLASEPGARSMNVSIWGYKDSLITQNWVSFTIDFRELLTRDCN
DDDYVQWLAHSDDISDPTDGCMLGYKETFLRLRKDSVCWNGRDYTVNTQPTPCACTLDDF
LCDFGYSRKENSSECVEQPDLQGKVLEFCLHGKEEQLQTKGYRKIPGDKCEGGQMPQRKE
IDLSKRCVSDLVSPELQTDGHSSKSVAILLAVVVVMLLSVAAGVVFVRKYVCGGRFLVHR
YSVLQQHVEDNAADGIDEPLDTNHAPNGKIEFHDDSDEDLLE
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggggctcctgctgcattgtctcctgctgctcgccgtctgcgctctcccagccggtggc
ttggatttccagccgggatccaaagctctcggacagccggtgttcgtgaggcgctccgtg
gagaggagagccgcgcaaatcgcgaagaggtccctgccgtcgtggctgggcgcatcgcac
caccacaggatacggcgaaggagcgtcgaccagggcgagtcgtgcaaaaagcacgaaggg
tatcagagcaagttaaaagacaacacccacagttatacactgaacgacctgagtggctcc
gtgtcactggcctgggttggagatggcacaggggtcatactggctttgaccacattccag
gtccctatcttcttgttgaaattcggccagtccaaactctaccgtagtgaggactacggg
aagtcgtttgaggacgtgaccaacttaatcaacaacacgttcatttcagcggagtttggc
atagcaatcggccctgagaattcaggcaaagtgatcctgacagctgaaatctctggagga
gatgggtatcggatttttgcctccagtgactttgggaagacttttgcccacctgaacttg
cctttcaatcccatgatgcagatctcatacaaccctgagaactccaatgtgctggcagtc
ctcagcatgaggaatgaactttggctttcggaagattttggacgcaactggaagaaaatc
tccgacatggtgtgcctttttaaatggggaagaaaaaataccatcttcttcacaagcagc
caaaatggatcctgcagtgacaggggaatgttgcagctaaagagaaccacagacttgggt
aaaaccatcaagactgttgccagcaagatcttctcttttggcctgggtggacgcttcctc
tttgcttcagtaatgacgggaaagggcactatgaggatgatccacgtgtctgtggatcag
ggtgagaactggaacatggctcagctccctccggttggccatgagcagttctactccatc
ctggcagcaaatgacgatatggtcttcatgcatgttgacgagcctggagatactggtttt
ggtacaatttatgtttcggacgatcgaggcacggtctactccaagtcactggagcgtcat
ctttatacgacgacggggggcgacaccgacttcaccaacgtcacttccctgagaggagtc
ttcatcaccagtgtgttggcagaagatacctctgtgcagtctgtggtgtcctttgatcag
ggaggagagtgggttcccctgcagagacctgccaacaccaagtgtgacgctacagccaag
gatccagacaagtgcagtctccacatccatgcggcttacagcattgctatgaagctggac
gtccccatgccgcccctgacggagccaaacgctgtgggtctaatcatagctcatggcagc
gtcggggacgccatctctgtgatgaagtcggatgtttatgtgtccgatgatggaggctac
acctggataaaggctcttaatgggccccatcactacgccatgctggactcaggagggctg
ctggtggctgtggaggacaatggcaaacccatcaacaaaatcaaattttccaccgatgaa
ggacagtgctggagtatttacgaattcaccaaagagccaatctcgttcacggggctggct
tcagagccgggagctcgctccatgaatgtcagcatctggggctacaaagattccctgatc
actcagaactgggtctccttcaccatcgacttcagggaactgctcaccagagactgcaac
gacgacgactatgtgcagtggttggcccactctgatgacatcagtgacccgacagacggc
tgcatgctgggttacaaagagacgttcttgcggctcagaaaggactccgtttgctggaat
ggacgtgattacactgtgaacacacagccaactccatgtgcatgcaccctggacgacttc
ttgtgtgactttggatactcgcgtaaagagaacagctctgagtgtgtggagcagccggac
ctgcagggcaaagtgttggagttctgcctgcatggcaaagaggagcaactgcagaccaaa
gggtacaggaaaatccctggagataaatgtgaaggaggacagatgcctcaacgtaaagag
attgacctcagtaagaggtgtgtcagtgatcttgtatctccagagcttcagacagacggt
cactcctccaagtctgtggccatactgttagcggtcgtagtcgtcatgctgctgagcgtc
gcagcaggagtggtctttgtcaggaagtacgtctgcggcggcaggtttttggtgcacagg
tactctgtgctgcagcaacacgttgaggacaacgctgcagacgggatagatgagccgctg
gacaccaaccacgcccccaacggcaaaatagagtttcacgatgactctgatgaggatctg
cttgaatag
DBGET
integrated database retrieval system
