Xiphophorus hellerii (green swordtail): 116726346
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Entry
116726346 CDS
T07363
Symbol
uhrf1
Name
(RefSeq) E3 ubiquitin-protein ligase UHRF1
KO
K10638
E3 ubiquitin-protein ligase UHRF1 [EC:
2.3.2.27
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xhe04121
]
116726346 (uhrf1)
03036 Chromosome and associated proteins [BR:
xhe03036
]
116726346 (uhrf1)
Enzymes [BR:
xhe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116726346 (uhrf1)
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116726346 (uhrf1)
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
116726346 (uhrf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTD
SAD_SRA
ubiquitin
PHD
zf-C3HC4_2
zf-C3HC4
zf-RING_10
zf-RING_2
zf-RING_UBOX
zf-RING_5
Rad60-SLD
DUF3592
Motif
Other DBs
NCBI-GeneID:
116726346
NCBI-ProteinID:
XP_032428924
LinkDB
All DBs
Position
9:9176137..9186342
Genome browser
AA seq
780 aa
AA seq
DB search
MWIQVRTMDGKETHRVDNLSKLTKVDELRLKIMELFKVEPERQRLFYRGKQMEDGHTIFD
YNVGLNDIVQLLVRQKAPAADVVKSKSKNKNKDKEAELSDSDSGCGSTQSESDKNSTHGE
VEGQTAGTSAQTNAVELVYPGFGFYKINELVDARDLNMGAWFEAQIVNVTKTTKTPKEES
DDGEEEILYHVKYEDYPENGVIQLLAKDVRPRARTVYQWHQLEPGMVVMVNYNPDDPKDR
GYWYDAEIKRKRETRTIREIYATIILGEAGDSLSDCRIMFITEIYKIEEPGSSSDLPAGT
DSPLKRSNGPECKHCKDDLKKNCRWCNCHICGIKQDPDKQLLCDECDMAYHTYCLNPPLT
SIPEDEDWYCPGCRNDTSEVVLAGEKLKKSKKKARMASASSSSQRDWGKGMACVGRTKQC
TIVPSNHHGPIPGVPVGSLWKFRVQVSEAGVHRPHVAGIHGRSNDGAYSLVLAGGYEDDV
DDGNEFTYTGSGGRDLSGNKRTAEQSCDQTLTHMNRALALNCNVPVNEKNGAESKNWKQG
KPVRVVRSCKGRKHSKFCPEEGNRYDGIYKVVKYWPDKGKSGFLVWRYLLKRDDDEPAPW
TREGKERIKKLGLVMQYPAGYQKEKENKNEVEEEETPNKAKRKRKSQGSESPKTVPAKTP
KKMKVEVYKLSQQQKSLIKNDQPNKKLWDEAMESLSLGPKFLTKVEEVFLCICCQEVVFQ
PITTECQHNVCKECLQRSFRADVYTCPACRHDLGKNYSMSVNKDLQDILSQLFPGYSNGR
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgtggattcaagttcgcaccatggatgggaaggagacccatcgggtggataacctgtcc
aaactcaccaaggtggatgagctgcgtctcaaaatcatggagctcttcaaggtggagccg
gagaggcagagacttttctatcgtggaaaacagatggaagatggccacaccatatttgac
tacaacgttggcctcaacgacatagtgcagctgcttgttaggcagaaggcccctgctgct
gacgtcgtcaaaagcaaaagcaaaaacaaaaataaagacaaagaagccgagctctccgac
tcggattctggctgcggctccacccagagcgagtccgacaagaactcaacccacggcgag
gtcgagggtcaaactgctgggacctctgctcagacaaacgcagtggagctcgtctatcct
gggtttggattttacaagattaatgagttggttgatgcaagagacctaaacatgggagca
tggtttgaggcccagattgtgaatgtcacaaaaacaacaaagacgcccaaagaagagtcc
gatgatggagaagaagagatcctgtaccacgttaaatatgaagattatccagaaaatggt
gtgattcaactactggccaaagatgttcgcccgcgggcacgcaccgtctaccagtggcat
cagctggaaccaggaatggtcgttatggtcaactataatccagatgaccccaaggatcgt
ggctactggtacgatgctgagatcaagaggaagcgggagactcgcacgatccgtgaaatc
tacgccacgatcatccttggggaagcaggcgactctcttagtgactgccggatcatgttc
ataactgaaatctataagatcgaggagccaggttcttcaagtgacttgccagctggaacc
gatagcccgttaaaaagatcaaatggacctgaatgtaagcattgcaaggatgatctgaag
aaaaactgccgttggtgcaactgccacatctgtggcatcaagcaggatccagacaagcag
cttctgtgtgacgagtgtgacatggcctatcacacgtactgtctgaatcctccactcacc
tccatccctgaagacgaagattggtattgccccggttgccgtaacgacaccagtgaagtt
gttctggctggagagaagctgaagaaaagcaagaagaaggcgaggatggcttctgcaagc
tcgtccagccagagagactggggaaagggaatggcctgtgtgggtcggaccaagcagtgc
accatcgtcccatccaaccaccatggtccaattccaggtgttcctgtgggttccttgtgg
aagttcagagtgcaggtcagtgaagctggtgtccacaggcctcatgttgctgggatccat
ggcaggagcaatgacggagcctactctcttgttttggcaggaggctatgaagatgatgtg
gatgatggcaatgagtttacctatactggctcaggggggcgagatctgtctggaaacaag
aggacagctgagcagtcatgtgaccagactctgacccacatgaaccgggctttggctctc
aattgcaatgtccctgtgaatgagaaaaatggagccgagtcaaagaactggaagcaaggc
aaaccggtcagggttgtgcgcagctgcaaaggacgcaagcacagcaaattctgccctgag
gaaggaaaccggtatgatgggatttacaaggtggtgaagtactggccagacaaaggcaag
tctggtttcctggtgtggcgctacctgctgaagcgcgatgatgatgagccggcaccatgg
accagagaggggaaggagcgcataaagaaacttggcctggtcatgcagtatcctgccggt
tatcaaaaggagaaggagaacaaaaatgaagtggaggaggaagagacacccaataaggcg
aagaggaagagaaaatctcaggggagtgaatcccctaagaccgtgcctgccaagactccc
aagaagatgaaagtggaagtttacaagctttcacaacagcagaaatccctcattaagaat
gaccagccaaacaagaagctgtgggatgaagctatggagtcgctgtctcttggaccgaaa
tttctgaccaaggttgaagaggttttcctttgtatttgctgccaagaagtggtctttcag
cctataaccacagagtgccaacacaatgtttgcaaggaatgcctccagcggtctttcagg
gcagacgtttacacttgccctgcctgcagacacgacctgggcaagaactactccatgtct
gtcaacaaagatctgcaggacattctaagtcagcttttcccaggctacagcaatgggcga
tga
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