Xiphophorus hellerii (green swordtail): 116726386
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Entry
116726386 CDS
T07363
Symbol
tmco1
Name
(RefSeq) calcium load-activated calcium channel
KO
K21891
calcium load-activated calcium channel
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116726386 (tmco1)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xhe02000
]
116726386 (tmco1)
Membrane trafficking [BR:
xhe04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Multi-pass translocon (MPT) complex
116726386 (tmco1)
Transporters [BR:
xhe02000
]
Other transporters
Pores ion channels [TC:
1
]
116726386 (tmco1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMC3_TMCO1
DUF6809
DUF5683
DUF2368
Exonuc_VII_L
Vpu
DSHCT
DUF4257
Piezo_TM1-24
DLH
Nucleoside_tran
Myc_target_1
SLC52_ribofla_tr
Peptidase_S49_N
DivIC
ATG14
Motif
Other DBs
NCBI-GeneID:
116726386
NCBI-ProteinID:
XP_032428982
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All DBs
Position
9:complement(27179072..27182921)
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AA seq
188 aa
AA seq
DB search
MSTMFADTILIVFISVCTALLAEGITWVLVYRTEKYKRLKAEVEKQSKKLEKKKETITES
AGRQQKKKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFV
PLSYIQGLSHRNLLGEDYTDCSFIFLYILCTMSIRQNIQKMLGLAPSRAATKQAGGFLGP
PPQAAKFS
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgagtaccatgtttgcagacaccattctgatcgtctttatttctgtctgtacggcgctg
ttagcagaagggatcacctgggtcttagtatatcgaactgaaaagtacaagaggctaaag
gctgaggtggaaaaacaaagcaaaaagcttgaaaagaaaaaagaaaccatcacagagtct
gcgggacgccagcagaagaagaaaatcgaaagacaggaagagaagctgaagaacaacaac
agagacctgtccatggtgcgcatgaagtccatgttcgcaattggcttctgcttcacagct
ttgatgggcatgttcaactccatttttgatggaagggttgtggccaagctgccgtttgtg
ccgctgtcctacattcaggggctgtcgcaccgcaacctactgggagaagactacactgac
tgctcctttatcttcctctacatcctctgcaccatgtccatcagacagaatattcagaaa
atgctcggacttgccccctccagagccgccaccaagcaggcaggggggttcctgggacct
ccgccccaagcggccaagttttcttaa
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