Xiphophorus hellerii (green swordtail): 116726403
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Entry
116726403 CDS
T07363
Symbol
sin3b
Name
(RefSeq) paired amphipathic helix protein Sin3b
KO
K23213
paired amphipathic helix protein Sin3b
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xhe03036
]
116726403 (sin3b)
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
116726403 (sin3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
mTOR_dom
Motif
Other DBs
NCBI-GeneID:
116726403
NCBI-ProteinID:
XP_032429003
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Position
9:14405075..14426452
Genome browser
AA seq
1277 aa
AA seq
DB search
MAKIQAHSTAKQINQIQDKPYVITQKQVQQQHFQKLKVEDALSYLDQVKIRFANDPGIYN
KFLDIMKEFKSQSIDTPGVINRVSQLFHGHPDLVLGFNAFLPPGYRIEIPKNGMAFLQSP
FTTQVSPGQPAKSLTTPAVAATSGSVPAAHSEAGPAQTSDTKAASSDNPASTSAGPSEPP
SKLSLPLMSKEGHSQATTSSISPPASETSPVEFDSAISYVNKIKNRFLDHPEIYRAFLEI
LHTYQKEQLEVKESRGGRGSSGMTEDEVFSKVASLFKGQEDLLAEFGQFLPDAKRSLFTG
SSLTGGKEQVKKSEEEDPIAKQNKKRPRPLLMHMSPLLKKKMKYPCAKDQSFASVGKHGV
LREFSFFDKVRRLFKSQEVYENFLRCIALFNQEVVSGAELLQLVTPFLGKFPELYSQFKS
FLGDKELSHAVSGLADRYMEGGGGREVDYASCKRLGSSYRALPKTYQQPKCSGRTALCKE
VLNDTWVSFPSWSEDSTFVSSKKTPYEEQLHRCEDERFELDVVLETNLATIRVLESVQKK
LSRLSPEDQERFRLDDCLGGTSEVIQRRAVYRIYGDKAPEIIEGLKKSPATAVPVVLKRL
KAKEEEWREAQQGFNKIWREQYEKAYLKSLDHQGVNFKQNDMKALRSKSLLNEIESIYDE
RQEQSTEEGGVGHQSRNGSGSASSSEPHMMFTYEDKQILEDAASLIIYHVKRQPTIHKDD
KDHIKRIIQHFVPDLFFSRRGELSDTEEWTDEEAEPEDGAERGGGASAPPTAAAGGGSGH
PNNASGGSAAAATTTTGSQPPLQPAQNQNQSQLQQQLNGESRRRRCSPSQPTDTEPSSTS
SSTNQPTVTASSTPGSTPMEASSSAVGEKVDLRDPEAEHQKELDGVYNLFFVNNNWYFFL
RLHQTLCSRLLRVYRQAERQLLEHRAEQNRERLLMADGRREKACDLAMELRLKQPSEVEL
EEYYPAFLDMVRSLLDGNLDSTQYEDTLREMFTIHAYIGFTIDKVIHNIIRQLQHLVSDE
VCLQVVDLYLAERKRGAAGGNLSSQCVRAAWETSYQWKAERIMAEENCFKVMFIQNKGQV
TMTLELLDTEEAQADDPLDVQCLSSYMEQFVGTESSLCSQAEGYFFKPVFLPRNLRRFRR
WQVRQVEAMRCRREWQRQLAVENAGSLECRFKLNTHKMVFVMNSEDYMYRRGALVKARKS
QHQVAACQHERFDKWHQSWLANHVPASAERSVQNWLMGEEEEDFIPCKTTCLSTELKGQA
VNRYQVHYSSSKAPSSP
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagattcaggcgcacagcaccgccaagcaaataaaccaaattcaagacaagcct
tatgtgataacacaaaagcaagtgcagcagcagcacttccagaagctcaaggttgaagat
gccttgtcatatctggaccaagtcaaaattcgctttgcgaacgaccctggcatatataat
aagtttttggacatcatgaaagaattcaagtcacagagcatcgacacaccgggggttata
aacagagtgtcacaactatttcatgggcacccagacctcgttttgggctttaatgccttc
ctgccaccaggctaccggatagagatccccaagaatgggatggctttccttcagtcgcca
ttcactacacaggtgtctcccggacagcctgcgaagagtctgaccactcctgcagtggct
gccacctcaggtagtgtccctgctgctcattcagaagcaggaccagcccaaaccagtgac
accaaggcggcctcatcagacaacccagcttcaacctcagcaggaccctcagagcctccc
agcaaactttctcttcccctgatgagcaaagagggccacagtcaggccaccacctcgtct
atctccccccctgcttcagagacgagccccgtagagtttgacagtgccattagctacgta
aacaagattaaaaaccgtttcctggaccaccctgagatttatagagccttcctagaaatc
cttcatacatatcagaaggagcagctggaggtgaaggagagtcgaggcggccgaggcagc
agcgggatgaccgaagatgaggtgttttccaaagttgccagtctcttcaagggacaagag
gacctacttgctgagttcggacagttcctgcctgatgccaagagatcactgttcacaggg
agttccctgacaggagggaaagagcaggtgaaaaagtcagaggaagaagacccgatagcc
aaacagaacaagaagaggcccagaccattgctgatgcatatgtccccactgcttaagaaa
aagatgaagtatccctgcgccaaagatcagtcctttgcttctgttgggaaacatggtgtc
ttaagagaattctccttttttgataaggttcgtcgcctgtttaaaagccaggaagtgtat
gagaacttcctgcgatgcattgccttgttcaaccaagaagtggtttctggggcagagctg
ctacaactagtgactccattcctggggaagtttcctgagctgtactctcagttcaagtca
tttctgggggacaaagagctctctcatgctgtgtcggggctcgctgatcgttacatggaa
ggaggagggggcagagaagtggattatgcctcttgtaaacgcctgggttcgagctacaga
gcattgcccaagacctatcagcagccaaaatgcagtgggcgcactgctctttgcaaagag
gtcttaaatgacacctgggtttcattcccctcctggtcggaggactcgacctttgttagc
tcaaagaagactccatatgaagagcaactgcatcgctgtgaggatgaaagatttgagttg
gacgttgtgctggagacgaatttggccaccatcagggtgttggagagcgtacagaagaag
ctgtctcgcctgtcaccagaggaccaggaaagattcagattagatgactgcctgggtggc
acctctgaggtcatccagcgccgtgctgtctatcgtatctatggcgacaaggcccctgag
atcatagagggactgaagaagagtcccgctaccgctgtgcctgtggtgcttaagaggttg
aaagcgaaggaagaggagtggagagaggcccagcagggtttcaacaagatttggagagag
cagtatgagaaagcctacctgaagtccctggaccaccaaggagtgaacttcaagcagaat
gacatgaaggccctgcggtcaaaaagtctcctcaatgagattgaaagcatctatgatgag
cgtcaggagcagagcacagaagaaggaggcgttggtcatcagagccgtaatggttcgggc
tcggcatcctccagcgagcctcacatgatgttcacatatgaggacaagcagatcctggaa
gacgccgcttccctcatcatctaccacgttaaacggcagcccaccatccacaaggacgac
aaggaccacattaagcgcatcatccagcactttgttcccgacctcttcttctctcgccgc
ggtgagctcagtgatacagaagaatggaccgatgaggaggcggagcctgaggatggggca
gaaagagggggcggagcctctgcaccaccaacagcagcagctggaggaggaagcggccat
ccgaacaatgcgtcagggggatcagcagcagcagcaacaaccaccacaggaagtcaacct
ccattacagccagctcagaaccagaaccagtcccaactgcagcagcaactcaacggtgag
tccaggaggaggcgctgcagtccatctcagcctactgacactgagccctccagcacatcc
agtagcacgaaccaacctacagtgacggcttcctccacccctggctctactcccatggag
gcgagctccagcgccgtgggagaaaaagtggacctccgcgaccctgaagcagaacaccag
aaggagctggatggtgtctataacctcttctttgtaaacaacaactggtatttctttttg
cggctgcaccagactctgtgttcgcggctgctgcgggtttaccggcaagctgaacggcag
ctgctggagcaccgagcggagcagaaccgggagaggctgctgatggcggatgggaggagg
gagaaggcgtgcgacctggccatggagcttcgcctcaaacagcccagcgaggtggagtta
gaggagtactatccagccttcctggacatggtgcgcagtctcctggacggcaacttggac
tccacacagtatgaagacacgctgagagagatgttcaccatccacgcctacatcggcttc
accatcgacaaggtcatccacaacatcatccggcagctgcagcaccttgtgagcgacgaa
gtgtgtctgcaagtggtggatctttatctggctgagaggaagagaggggcggcaggcggg
aacctgtcctcccagtgcgtcagagcagcttgggagacaagctaccagtggaaggctgag
aggatcatggctgaagagaactgcttcaaggtcatgtttatccaaaataaaggccaggtg
acgatgaccctcgagctgctggacaccgaggaagctcaggctgatgatccgttagatgtt
cagtgcctgtcgagctacatggagcagtttgttgggacagagtccagtttgtgctcccag
gcagaaggttacttcttcaagcctgtgttcctgcccaggaacctgcggcgtttccggcgc
tggcaggtgcggcaggtggaggcgatgcgctgcaggagagagtggcagcggcagctggcc
gtggagaacgccggcagtctggagtgtaggttcaaactcaacactcacaagatggtgttt
gtcatgaactctgaggactacatgtaccgccgcggcgcgctggtaaaggccaggaagtcg
cagcaccaagtcgcagcgtgccaacacgaacgcttcgacaagtggcaccaaagctggctg
gccaatcatgtcccggcctcggccgagcgctcggtgcagaactggctgatgggtgaggaa
gaggaggacttcataccctgcaagaccacctgcctgtccaccgagctgaaaggacaggcg
gtcaacagataccaggttcattacagcagtagcaaagccccgtcctctccgtga
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