Xiphophorus hellerii (green swordtail): 116726431
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Entry
116726431 CDS
T07363
Symbol
tpr
Name
(RefSeq) LOW QUALITY PROTEIN: nucleoprotein TPR
KO
K09291
nucleoprotein TPR
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116726431 (tpr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xhe03019
]
116726431 (tpr)
Messenger RNA biogenesis [BR:
xhe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116726431 (tpr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
DUF7491
Motif
Other DBs
NCBI-GeneID:
116726431
NCBI-ProteinID:
XP_032429047
LinkDB
All DBs
Position
9:4355195..4383785
Genome browser
AA seq
2353 aa
AA seq
DB search
MAALLLQELDSSDISKLPTTLQSKFEKLLLDRQYEIDSLKALHEQFRVDSEQQFFEKVDQ
LQRCQAELLSQAQEHLKVKEDFTKLDEELKSVCEKNRENESAQEKLSTEQTLLSKAKEEL
EGEKRELVRTLERRSLEVENLNDDLRQLNDKLMEVNTSKMAMQMKLDEHEAAEVNIKYKE
KRMEQEKELLHGQISWLKDELKAKTEGLLTLSREKGNEILELKFKLENKEDELTKLQDQV
TSLKTSNEHLQKQSEEMVNKLKEAKEQQANSEEKFRNELNANIKLSNLYKGAAADSEAKS
EELSRAVEELHKLLKDAGEANKALEEKLQEMNDAADKTVNELKEKIQNLEKELDNANDLL
STSKLRGPAGASVPAEDQITTMSPTAAAVSKIKPGMKLTELYTAYLESQEQLQLERLENK
RVNKYLDDIVQEVEAKAPILKRQRDEHERMQKSVASLSAKLEQAVKEVHRLQNEADEANK
RSTLLERDSQRYELQVADMAQQVRVLLIELEEARGNHVLQEEEVSSADISSTSEVISQHL
VTFRSVEELQKQNQRLLVALRDLSDAQEKEEQESTGNKRVELEQSLEKAQAELESLKEQR
SQQIKMTESIVRQRDMYRVLLAQATGVAFPQQGTPPEEFSLTSNPRRSPATTPTALVTMA
ESAEALEAKAALRQLQEVFSAYKKERLDSDKAMNEQNEKLQEQLSDLRSQNAKISTQLEF
ASKRYEMLQDNVEGYRKEIASLREKEQKMAATTQKLEQTVHTLNEDLKAAKEKLTLTEGQ
AEKLRKERDMLKLVESRLNQEKETFVSQQQSQNLLLTNLQAIQATLERAEADTRQRLNSQ
IEKQELQISQLQKRLEQEVEQRHLCSRTQEVQLIDVKRQLETQVALHQKTKELLNAAELE
LNTLRMQQGRTEARHTLGSPSTPVFRGLQGSDQEKEELQGRLQLAETRAEELAESLRAAT
ASMEQYRAMAQSLEESLETEKQVTEQARLSVEACLKEAQERHRTLEEKLQEAEKEKQDLE
ESKKKDLASLEEQINDLKRSLSGAQTDHQAVLQQLAVAETQKQQALQDRQEQAKLAAEAQ
DKYEREMMLHAADVEALQAAKAQALQAAELRNQLDEKVQRVGAELLEARVSWEVQEKILK
EETSKMESRYEELQRQNTLLHEQVQTMSTNMAANIQRAANESSLNVSLSEEGKSQDQLLE
ILRFVRREKEIAESRFEVAQGESLRHRLRVEHLERELREVQDSLTAARERMQVTAKTLAQ
HDELMKKTETMNILVETNKMLREEKTKMEQELQQTQAKVQKMESDVFPLQQSNSELSEKN
GMLQAEKAILEEDIKRWKARTQNLLSQQKDSDPDEYKRLNTEKELHLKRIQQLTEENSRL
KAELNKINNLTTSLQGQMQNMRESMSKANDDRNVLRKDLETKNQEIQEKVRTITQVKKIG
RRYKMQYDELKVQHDKLVAEAAAGPSQDEEAHQASAQELQSVKDSLNQAETRTKELEGQL
ENINKVVTERETELRNVQEQSSRLQTELNRLRQELQEKTTQEESLRQQMAEKDEKTRKAL
LVARQKISHVTATKEQLQRENEELKQQREELEVRVSALRSQYEGRLSRQERELRDLRGQQ
ERQEQRDEPPEAGPSKTQEQQRTTEQRQISLKTTPAADRGSTSASEPPTANIKPTPVVAT
ASKQPVNPGNKPTPRASIRPMITPVPPPTPTATVMPTTQVETQEAMQSTEAPPVEHVTVY
GSASGSVRSASPNVQTTLAGSMLTVQQTQIQATAFVQPTQQQSVTHPEPDNREPSPVTIE
ATPSSQVEWPSTSSSSSSSVFGTVSATPGTSTLSKRPREEEESSAAAFTEVEAAQEEPRA
PMAKKLRIIQRVGPEEEVMADESAEAEGVVPSDSQDGAKASQAEFSNLEEAEEDSASQSV
PAEPAVTPSQSETPDQLQQEVIVILTDSESXEEEEEEEGEEQDYAEEEEEDEEEEEEEEE
EEDEDEEDEDDGGMEEEGEESNEGSGDGNEVYEGDDTEGADVTDPGTETEESLGASDSTQ
RPADSQTPSFEGSPMEALSTEQPITSSGARIPQSPRRPVQQLLPQLNIHPAQSSELGPSA
QRIRRQSVGRLNPGMPSSAQHFFEEDDRMVPSIPTLVPPRSEGFDQAIHSPQVAGVPRFR
FDLSEDVPQTSSSSHSDLGQLASQGGLGLYESPLFLATHEEELGGRSVPTTPLQVAAPVT
VFSEAAQSDTTEHASQSVPMVSTSTPGLVLPGTAGGGEERDIFLEPDTESAEASVDAVVS
QGDAEEPSQPSDKANLPSTSQEPSSSSADTVPKPARPGQPRQLQRWQDSRGGRMKRGGQS
FPPRGFHGRRFLR
NT seq
7062 nt
NT seq
+upstream
nt +downstream
nt
atggcggcactgctgttgcaggagctggattcgtccgatatatctaaactaccgacaact
cttcaaagcaaatttgagaaacttttattagatcggcagtatgaaattgattctttaaaa
gcactgcatgaacagtttcgggttgacagcgagcaacagtttttcgaaaaagttgatcaa
cttcagcggtgtcaggccgagcttttgtctcaagctcaagaacatcttaaagtcaaagag
gatttcacgaagcttgatgaagaactgaaaagtgtttgtgagaagaacagggaaaatgag
tctgcgcaggagaagttgtcaacagagcagactttgctttcgaaagccaaagaggaattg
gaaggagaaaagcgggaacttgtgaggacactggagaggaggtctctggaagttgagaat
ttaaatgatgacttgaggcagctgaatgataagttaatggaagtcaacactagtaagatg
gctatgcaaatgaagctggatgaacatgaagctgcagaagtaaacattaaatataaggag
aagcgtatggaacaagagaaggagctgctgcatggtcagatttcttggcttaaagacgaa
ctgaaggcaaagacggagggactgctcaccctgtccagggaaaaggggaatgaaatcttg
gagctgaaattcaaactggagaataaggaagatgagttaaccaaactacaagatcaagtg
accagtttgaaaacctcaaatgaacaccttcaaaagcaaagtgaagagatggtcaacaaa
ctaaaagaagcaaaggagcagcaagccaactcagaggagaagtttcgaaacgaactgaat
gccaacattaaactttccaacttatacaagggtgcggcagcagattctgaagcaaaaagt
gaagagctgagtcgggcggtggaggaactacacaagctgctgaaagatgctggagaagcc
aacaaggctcttgaggaaaagctgcaggagatgaacgacgcagcagacaaaactgttaac
gagttaaaggagaagatccagaaccttgagaaagagctggacaacgccaatgacctgttg
tcaacttctaaactcagaggaccagctggtgcgagcgtgccggcagaggaccaaataaca
acaatgtctccaacagcggctgctgtgtccaaaataaaacctggcatgaagctgactgaa
ttgtacacggcgtatctggagagccaggagcagctgcagctggagcgcctggagaacaag
cgtgtcaacaaatatctggatgacattgtgcaggaagtcgaagccaaggcccccatcctg
aaacggcagagggacgaacacgagcgcatgcagaagtcggtggccagtctgtcagccaag
ttggagcaagccgttaaggaagttcaccgtctgcagaacgaggctgatgaagccaataag
cgatctactctcctggaaagagacagtcagagatatgaactccaggtggctgacatggct
caacaggttcgagtgttgctcattgagctggaagaggcccgtggaaaccacgtgcttcag
gaggaggaagtgagctcagccgacatcagcagcacatcagaggtcatcagccaacacctg
gtgaccttccgcagcgtggaggagctccagaagcaaaaccagcgacttctcgtggccctc
agggatctgagtgacgcccaggagaaagaagagcaggagagcactggcaataagcgtgtg
gagctggagcagagtttggagaaagcccaggcagagttggagtcgctgaaggaacaacgc
agccagcagattaagatgacagagtccatcgtgaggcagagagacatgtaccgtgtactg
ctggctcaggcaaccggagtggctttccctcaacaagggacaccaccggaggagttttct
ctgacatcgaacccccgacgttcaccagcaaccactcccactgcactcgtgaccatggcc
gagtctgccgaggcgctggaggccaaggcagcgctgcggcagttgcaggaagtgttctct
gcctataagaaggagcggctggacagcgataaggcgatgaacgagcagaatgaaaagctg
caggagcagctctctgacctccgctctcaaaatgccaaaatatcaactcagctagagttt
gcatcaaagaggtatgagatgctgcaggataacgttgagggctacaggaaagagatcgcc
tcacttagagagaaagaacagaagatggccgccaccacacagaaacttgagcagactgtc
cacacgctaaatgaagatctgaaagctgcaaaggagaaacttaccttgactgagggtcag
gctgagaagctgcgcaaggagagagacatgctgaagctggtggagtccaggctgaaccag
gagaaagagacatttgtgagccaacagcagagccagaatctactgctgaccaatctgcag
gccatacaagccactctggagcgggctgaggccgacacacgacagcgtctcaacagccag
atcgaaaagcaggaactgcagatctcccagcttcagaagaggctggagcaggaagtggag
cagcgccatctgtgcagcaggacccaagaagtccaactaatagacgtcaaaaggcagctg
gagactcaggtggccttacatcagaaaaccaaagagctgctgaatgcggctgagttggag
ctcaacaccctgaggatgcagcaaggccgcaccgaggcacgccacaccctgggctcgccg
tccacacccgtcttcagaggcctgcagggttcagatcaagagaaggaggagctccagggc
cgcctgcagctggctgaaacccgagcagaggaactggcagagagcctgagggccgccacc
gccagcatggagcagtacagagccatggctcaaagcttggaggagtccctggagacagag
aaacaggtaacggagcaggctcgcctgtcagttgaggcttgtttgaaggaagctcaggag
cgacaccggacgctggaagagaaactccaggaagcagagaaggaaaagcaggacttggag
gagagcaagaaaaaagacctggcatctctggaggaacagattaatgacctgaagagaagc
ctcagcggtgcgcagacagatcaccaggccgtgcttcagcagctggctgtagctgaaacc
cagaagcagcaggctctgcaggacagacaggagcaggcaaagctggcagctgaagctcaa
gataaatacgagcgggagatgatgctgcacgcagccgacgtggaggccctgcaagccgcc
aaggctcaggccctgcaggccgccgagctcagaaaccagctggacgagaaagtccagcga
gtcggcgctgagctgctggaggccagagtctcctgggaggtgcaggaaaagatcctaaag
gaggaaacgtcaaagatggaaagtcgctatgaggagctgcagaggcagaacaccctcctg
catgagcaggtccaaaccatgagcaccaatatggccgccaatattcagcgtgccgccaat
gagagctcgctgaacgtttctttgagtgaagagggaaaatctcaagatcagctgcttgag
attctgaggtttgttcgtcgggaaaaggagattgctgaatcccggtttgaggtggcgcaa
ggggagagcttacgtcaccgtctgagagttgaacacttggaacgagaacttagggaggtg
caggacagtctgactgctgcaagggagagaatgcaggtgactgcaaagactctggcccag
catgatgagctgatgaagaagactgaaacgatgaatatcttggtggagaccaacaagatg
ctgagagaggagaaaaccaaaatggagcaggaactgcagcaaactcaagctaaggtgcaa
aagatggagtcggacgtctttcctctgcagcaaagcaactctgagctgagtgagaaaaac
ggcatgttgcaggcggagaaggcgatcctggaggaggacataaagcgctggaaggctcga
actcagaatttgctgagtcagcaaaaagattcggaccctgacgagtacaaacgtctcaac
accgagaaagagctacatctgaaacgcatacagcagctcacggaggaaaactctcgactt
aaagctgagttgaacaagataaataacctaacaacgtcactccagggacaaatgcagaac
atgcgtgaaagtatgagtaaagcaaacgacgacagaaatgtgttgaggaaggacctggaa
actaaaaaccaggaaatccaagaaaaagtgcgaaccatcacccaggtgaagaaaatcgga
cggcgctacaagatgcaatatgatgaactaaaggtgcaacatgacaagctcgttgctgag
gccgccgcaggcccatcccaagacgaggaggcacatcaagcttcagctcaagagctacag
agcgtaaaagactccctgaatcaggctgagaccagaaccaaagaactggagggacagctg
gagaacatcaacaaggtggtcacagagcgggagactgagctgcgtaacgtccaggaacag
tcgtccaggctgcagacggagctgaaccgcctgaggcaggagctgcaggagaaaacgaca
caggaggaaagtctgagacagcagatggccgaaaaggacgagaaaacacgaaaggctctt
ctggttgccagacagaagatcagccatgtcacagccaccaaagagcagctgcagcgagag
aacgaggagctgaagcagcagcgtgaggagctggaggtgcgagtgagcgctctcaggtct
cagtatgagggccgtctcagccgacaggagcgggagctcagagacctgaggggtcagcag
gagagacaggagcagagagacgagccccccgaggcgggaccaagcaagactcaagagcag
caaaggacgacagaacagaggcagatcagtctgaagacgaccccagctgcagacaggggc
agcacaagcgcctctgagccgccgaccgccaacattaagccaacacctgtggttgccaca
gccagcaagcaaccggtcaaccctggcaacaaaccgacaccccgggcaagcatcaggccg
atgataacccctgtgccgccgccaacacccaccgctactgtcatgcctaccacacaggtg
gagacgcaggaagcgatgcagtctaccgaagcgccgccggtggagcatgtgaccgtgtac
ggaagcgccagcggctccgttcgctccgccagtcccaacgtccagaccaccttagcgggc
tccatgctgaccgttcagcagacgcagattcaggccacagcattcgttcagcccacgcag
cagcagagcgtcacccacccagagccggacaatcgggagccgtcgcctgttacgatcgag
gccacgcccagttcacaggtggaatggccttcaacctcctcttcctcttcctcgtctgtg
ttcggcactgtttcagcaactcctgggacgtccaccctgtccaagagacctcgagaggaa
gaggagagcagcgctgctgcgttcacagaggtagaggcagcccaggaggaacccagagct
ccaatggccaaaaagctgcgcatcattcagagggtgggaccagaggaggaagtgatggct
gacgagagtgcagaggccgagggggtggtgccatcagacagccaggatggagcaaaagca
agccaggcagagttttcaaaccttgaggaagcggaggaagattcagcctctcagtcggtc
ccagcagagccggcggtcaccccaagtcaaagtgaaacgcctgaccagctgcagcaggaa
gtcatcgtcatactgacggactctgaaagcnntgaagaggaggaggaagaagagggagaa
gagcaggactatgcagaggaggaggaagaagatgaggaagaagaagaggaggaggaagag
gaagaagatgaagatgaggaggatgaagatgatggggggatggaggaggaaggagaggag
agcaacgaaggcagcggcgatggcaacgaagtttatgagggagacgatacagagggagct
gatgtcaccgacccgggcactgagacagaggagagtttaggggcgtcagactccacccag
aggcccgccgattcccagacaccaagctttgagggaagcccaatggaggccttgtcaaca
gaacagccaatcacaagttccggagcgcgtattccccagtcgccacggcgacctgtgcag
cagcttctgccccaactcaacatccatcccgctcagtcttcagaactgggaccatctgct
cagcgaatccgtcgccagtcagtgggccgactcaatcctggcatgcccagcagtgcgcag
catttctttgaagaagacgacaggatggttcccagcattcccactctggttccccctcgc
tcagaaggctttgaccaagctatccattctcctcaggttgctggagtccctcgcttcagg
tttgatctttcagaagacgtgcctcagaccagctcctcctcgcactctgacctcggccag
ctcgcctcgcaaggaggtcttgggttgtatgaaagtcctctgttcttggcgactcatgag
gaagagttgggtgggcgcagcgttcccaccactcctctgcaagttgcagctccagtaact
gtcttctcggaggctgcacagtctgacacaacggagcacgcctcgcagtcggttcccatg
gtgagcacgtccacgccgggcctggtgctgccaggaaccgccgggggcggggaggagaga
gacatcttcctggagccagacacagagagtgctgaagcgtctgtggatgctgtggtgtca
cagggagatgcggaggagccgagccagccgtctgacaaggccaaccttccctccaccagc
caggagccttcctccagctctgcagatacagtccctaaacccgctcgtcccggacagccc
agacagctgcagcgctggcaggacagccgtggtggtcgaatgaagagaggaggtcaaagc
ttccctccccgcggctttcatgggagacgatttctgagatga
DBGET
integrated database retrieval system
