Xiphophorus hellerii (green swordtail): 116726432
Help
Entry
116726432 CDS
T07363
Symbol
rexo1
Name
(RefSeq) RNA exonuclease 1 homolog isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
116726432 (rexo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xhe03009
]
116726432 (rexo1)
Ribosome biogenesis [BR:
xhe03009
]
Eukaryotic type
Pre-60S particles
RNases
116726432 (rexo1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
REX3_middle
Motif
Other DBs
NCBI-GeneID:
116726432
NCBI-ProteinID:
XP_032429048
LinkDB
All DBs
Position
9:4713561..4731666
Genome browser
AA seq
1236 aa
AA seq
DB search
MLRSTGFFRGIDCPFYADYNDGKGSRNGCNRPYCHFRHSRQSRPSYGDVKKLQSGQKDQG
YDPFNPEVVRPQEQQNGQPAPSGDLSGALEMVNRAIEEVRGEVEREQRKLSRIGDEPYSP
TEKTGSSSSYVAKSQAAASHLAYDPGSYQITSGGYDPTPGCSKYTLDSDSQKYNSSSSME
YVPTSLKKPQSRTQVPCPPQSTKYLSTACSAQWKYTLDNSGPSTNMEYDPLSNYSAGIAV
KNKRDEGSHPVETDYKKAYRLDASDKNGGTAGKKPPQASIDLKKYTISDSDEESSGTEYR
PTSLSNLQQRKANIVSARDALGKDTKDRSKSIKGALTQRNKEELAQDLDSQENTKQKENL
EKRKLADQSGHGKISKPEKTQNIDKEVKKSSSVKSSSGSSSSAKDKLSCKNFKQDSAKKE
NKNQKDDSKNMLKMKDKVQREGRDEKRCESKSKMVEKVKRALSEQEKDARESKKLKPSER
EKDQSKNKDSQHRNGKLDSSRREKDVKKSKSSSSSCKGSSAKAKQSASSSKEKLEDLSLS
HADLFGDESPEEADPMEADSDDEPEEVLVRKSADALKRGLMSKRTASERTPSSSEDKADG
EPERSRSSWEEPDDVRVDFSMFQDDLDFDSDPMEECLRIFNESNDVKKEDKGRQAKQASR
DSEEERSTDSTLTTLFPGQKKRVSHFVAKGDTDAPSKTVVRPYKRPTPQEVCFQRMQLAQ
QQAAQLSASVKAASQSSTSSFAGEKKRIAHRPNPQITSTKTTGPAHGKPAASETPQGVKS
QTTAGILSKTSSTMAQKRTAHTPTMKSSSMRRPVIPTEFGAKVPTNIRQRYLNTFIDECV
KFCPSEDVAFQMALDEEKLVYERSSSKNIYLNVAVNTLKKLRGKSSSCSSPVKKDSRLAA
KRKAQSHEEVLGGRLAATTSFTVNRSGKQQEEKLSGASLYRKLQAYLMTEEQLQEHGYPR
LNPEAPGKAVIYNQPERKICPDPFGRICCRCGAEYKVSVNGSCVRREECSHHWGRLRRHR
VAGGWETTYSCCSAAVGAPGCQIAKQHVQDGRKESLDGFVSTFSKPLPPDGNGGVFALDC
EMCYTKQGLELTRVTVIDSEMKVIYDTFVKPDSKVVDYNTRFSGVTEEDLVNATITLRDV
QAVLLSMFRAESVLIGHSLESDLLALKLIHSSVVDTAIVFPHRLGLPYKRALKTLMADYL
KRIIQDNVEGHDSSEDASACMELMIWKIKEDAKVKR
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgttaaggtccaccggcttcttccgagggattgactgtccgttttacgcggactacaac
gacggcaaaggcagtagaaatgggtgtaacagaccgtactgtcacttcagacacagccgg
cagagtcggccgtcctacggagacgttaaaaagctgcagtctggacaaaaagatcagggt
tacgatcccttcaacccagaagtagtgagacctcaggagcagcagaatgggcagcctgct
ccttctggggacctcagcggcgccttggagatggtcaacagagccatcgaggaagtccgt
ggcgaggtggagcgagaacagcggaagctgtcccgcatcggagacgaaccttacagtccc
actgagaagaccggttcgtcttcatcctacgtcgctaaaagccaagcagcggcctcgcac
ctggcttacgaccctgggagctatcagatcacatcgggaggatacgatcccaccccgggc
tgcagcaagtacaccttggattcagacagtcagaagtacaacagcagcagctctatggaa
tatgttcccacttccctgaaaaagcctcagtctcggacacaagtgccctgtcctccccag
agcaccaagtatctgagcactgcatgctctgcacagtggaaatacactctggacaactct
gggccgtctacaaatatggagtatgaccctctgtccaactactctgcagggatcgcagtg
aaaaacaagagagacgagggttcacatccagttgagactgactataagaaggcatatcgg
ctggatgcttcagataagaatggtggtacagctgggaaaaagccaccgcaggcgagtata
gacttaaaaaagtacaccatctccgactctgatgaggagagctctggaacagagtaccga
cccacatcgcttagcaatctccagcaaagaaaggccaacattgtgtcggccagagacgct
ttggggaaagatacaaaagacaggagtaaaagtataaagggcgctcttacacagaggaac
aaggaggagcttgcacaggacttagactcacaggaaaataccaaacaaaaggagaacttg
gagaaaaggaagctggcagatcaaagtggtcatggtaaaattagcaaaccagagaaaaca
caaaatattgataaagaagtaaagaaatcatctagtgttaaaagtagcagtggtagcagc
agtagtgcaaaagacaaattatcatgtaagaactttaagcaagactctgcaaagaaggag
aacaaaaatcagaaagatgatagtaaaaacatgctaaagatgaaggataaagttcaaaga
gaaggcagggatgaaaagagatgtgagagtaagagcaagatggtggagaaagttaagaga
gccttaagtgaacaagagaaagatgcacgagaaagcaaaaaactgaaaccatcggagcgt
gagaaagaccaaagcaagaataaagacagccagcacagaaacggtaaactggatagcagt
agaagagaaaaggacgttaagaaaagcaaaagcagctccagcagctgcaaggggagctcg
gctaaagcgaagcaaagcgccagctcgtcaaaagagaaactcgaagacctgagtctgagc
cacgcagatctgttcggagacgagagccccgaggaggccgacccgatggaggcggacagc
gacgacgagccggaggaagtcctggtcaggaaatcagccgacgcgttaaagaggggacta
atgagcaagaggacggcttcagagaggacgccatcttcctctgaggacaaagccgacggg
gaaccggaacgcagcaggtcgagctgggaggagcctgacgacgtccgagtcgacttctcc
atgtttcaggacgatctggactttgactcggatccgatggaggagtgtttgcggatcttc
aacgaatccaatgatgtgaagaaggaggacaagggacggcaagcaaagcaggcttccagg
gattcagaggaggagagaagcacagatagcactttaaccacactcttccccggccaaaag
aagagagtgtcccattttgttgccaaaggagataccgatgcaccttcgaagacagtggtc
cggccgtacaagcggcccactccgcaggaggtctgcttccagcgtatgcagctggcgcag
cagcaagccgcccagctttcagcgtcagtcaaagccgcctcacagagctcgacctccagc
ttcgccggagaaaagaagagaatcgctcaccggcccaatcctcagataacctccaccaag
acgacaggtccagcacatggaaaaccagctgccagtgagactccccagggggtgaagagc
caaaccacagctggcattctgtccaaaacctcgtctacgatggcgcagaagaggacggca
catacacccaccatgaagagctcctccatgaggcgtccggtcatccccactgagttcggg
gcgaaagttcccaccaacatccgccagcgctacctcaacacgttcatagacgaatgtgtc
aagttttgcccgtcggaggatgttgcatttcagatggcccttgatgaggagaagctggtg
tacgagcgcagtagcagtaaaaacatctacctcaacgttgccgtcaacacgctgaagaag
cttcggggcaaaagcagctcgtgttcatcacctgtcaaaaaggattccaggcttgcagct
aagcgaaaggcgcagtcccatgaggaggttctgggaggtcgtcttgcagccacaaccagc
ttcactgtcaaccggtcgggcaaacagcaggaggagaaactctccggcgccagcctgtac
aggaagctgcaggcgtacctaatgacagaggagcagctgcaagagcacggatacccgcgg
ctaaaccccgaggccccgggcaaggccgtcatctacaaccagccagagagaaagatctgc
ccagacccgttcggcaggatatgctgccgctgcggcgccgagtataaggtcagcgtcaac
ggcagctgcgtccgcagagaggagtgcagccatcactgggggcgtttacgcagacacaga
gtcgccggcggctgggagacgacgtacagctgctgctcggctgctgtcggagctcctgga
tgccagatagcaaagcaacatgtgcaggacggccgtaaagagtccctggacggcttcgtg
tcgacgttcagcaaaccgctgccaccggacggaaacggcggagttttcgctttggattgt
gagatgtgctacactaagcagggcctggagctgaccagggtcacagtcatcgactccgaa
atgaaggtcatctacgacacgtttgtgaagcccgacagcaaagtggtcgactacaacaca
cgattctcaggcgtcactgaggaggacttggtgaacgccaccatcaccctgagagacgtt
caggcggttctgctcagcatgttcagggcagagtccgtcctcatcggacacagtctggag
agcgacttgctcgcactcaagctcatccacagctcagttgtagacacggccatcgttttt
cctcaccgcctcggtctgccctacaaacgtgccttgaagaccctgatggccgattacctc
aaacgcatcatccaggacaatgtggagggccacgactccagcgaggacgcgtcggcctgc
atggagctgatgatatggaagattaaagaggacgcaaaggtcaagagatga
DBGET
integrated database retrieval system
